RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 PCP2Q8IVA1 136 aa12.03□□□□□ -0.48
USP42-205ENST00000465073 VAMP3Q15836 100 aa12.02□□□□□ -0.49
USP42-205ENST00000465073 ATOH7Q8N100 152 aa12.02□□□□□ -0.49
USP42-205ENST00000465073 LINC00575Q6W349 94 aa11.98□□□□□ -0.49
USP42-205ENST00000465073 Q6JHZ5 121 aa11.97□□□□□ -0.49
USP42-205ENST00000465073 SNRPEP62304 92 aaKnown RBP11.95□□□□□ -0.5
USP42-205ENST00000465073 TRBV7-7A0A0K0K1E9 115 aa11.94□□□□□ -0.5
USP42-205ENST00000465073 hADV29S1A0JD25 119 aa11.94□□□□□ -0.5
USP42-205ENST00000465073 Q6ZQY7 126 aa11.94□□□□□ -0.5
USP42-205ENST00000465073 CLEC2BQ92478 149 aa11.94□□□□□ -0.5
USP42-205ENST00000465073 FLGP20930 4061 aaPredicted RBP11.93□□□□□ -0.5
USP42-205ENST00000465073 OCIAD2Q56VL3 154 aa11.91□□□□□ -0.5
USP42-205ENST00000465073 IGFL1Q6UW32 110 aa11.91□□□□□ -0.5
USP42-205ENST00000465073 ATP11AUNQ6ZP68 121 aa11.9□□□□□ -0.5
USP42-205ENST00000465073 Q75L30 129 aa11.89□□□□□ -0.51
USP42-205ENST00000465073 OBSCN-AS1Q96MR7 158 aa11.89□□□□□ -0.51
USP42-205ENST00000465073 Q6Q795 121 aa11.85□□□□□ -0.51
USP42-205ENST00000465073 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.85□□□□□ -0.51
USP42-205ENST00000465073 PPDPFLQ8WWR9 84 aa11.83□□□□□ -0.52
USP42-205ENST00000465073 SNHG12Q9BXW3 62 aa11.81□□□□□ -0.52
USP42-205ENST00000465073 LST1O00453 97 aa11.8□□□□□ -0.52
USP42-205ENST00000465073 HSBP1L1C9JCN9 74 aa11.79□□□□□ -0.52
USP42-205ENST00000465073 SCGB1D1O95968 90 aa11.78□□□□□ -0.52
USP42-205ENST00000465073 BVES-AS1Q5T3Y7 98 aa11.78□□□□□ -0.52
USP42-205ENST00000465073 Q96NJ1 140 aa11.76□□□□□ -0.53
USP42-205ENST00000465073 H3BUT2 72 aa11.75□□□□□ -0.53
USP42-205ENST00000465073 C12orf57Q99622 126 aa11.72□□□□□ -0.53
USP42-205ENST00000465073 HIST1H2BLQ99880 126 aa11.72□□□□□ -0.53
USP42-205ENST00000465073 SS18L2Q9UHA2 77 aa11.72□□□□□ -0.53
USP42-205ENST00000465073 HIST3H2BBQ8N257 126 aa11.71□□□□□ -0.53
USP42-205ENST00000465073 S100A2P29034 98 aa11.7□□□□□ -0.54
USP42-205ENST00000465073 C20orf166-AS1Q96NR2 134 aa11.7□□□□□ -0.54
USP42-205ENST00000465073 HIST1H4GQ99525 98 aa11.7□□□□□ -0.54
USP42-205ENST00000465073 CFC1P0CG37 223 aa11.67□□□□□ -0.54
USP42-205ENST00000465073 A8MUU9 505 aa11.66□□□□□ -0.54
USP42-205ENST00000465073 SNCGO76070 127 aa11.66□□□□□ -0.54
USP42-205ENST00000465073 TEN1Q86WV5 123 aa11.66□□□□□ -0.54
USP42-205ENST00000465073 TRBV20-1A0A075B6N2 111 aa11.63□□□□□ -0.55
USP42-205ENST00000465073 KRTAP9-8Q9BYQ0 159 aa11.63□□□□□ -0.55
USP42-205ENST00000465073 NDUFV3P56181 108 aaKnown RBP11.61□□□□□ -0.55
USP42-205ENST00000465073 H0YGX0 51 aa11.6□□□□□ -0.55
USP42-205ENST00000465073 COX8AP10176 69 aa11.59□□□□□ -0.55
USP42-205ENST00000465073 A0A087WSZ3 146 aa11.58□□□□□ -0.56
USP42-205ENST00000465073 RAB37Q96AX2 223 aa11.57□□□□□ -0.56
USP42-205ENST00000465073 DLEU1O43261 78 aa11.56□□□□□ -0.56
USP42-205ENST00000465073 FAM218AQ96MZ4 157 aa11.55□□□□□ -0.56
USP42-205ENST00000465073 H3BMG7 143 aa11.54□□□□□ -0.56
USP42-205ENST00000465073 GHRHP01286 108 aa11.53□□□□□ -0.56
USP42-205ENST00000465073 S100A6P06703 90 aa11.53□□□□□ -0.56
USP42-205ENST00000465073 DSCR10P59022 87 aa11.53□□□□□ -0.56
USP42-205ENST00000465073 A0A0B4J2C4 111 aa11.52□□□□□ -0.56
USP42-205ENST00000465073 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.51□□□□□ -0.57
USP42-205ENST00000465073 USH2AO75445 5202 aa11.49□□□□□ -0.57
USP42-205ENST00000465073 A0A1B0GX51 115 aa11.49□□□□□ -0.57
USP42-205ENST00000465073 FABP2P12104 132 aa11.49□□□□□ -0.57
USP42-205ENST00000465073 SIGMAR1Q99720 223 aa11.48□□□□□ -0.57
USP42-205ENST00000465073 KRTAP9-7A8MTY7 169 aa11.47□□□□□ -0.57
USP42-205ENST00000465073 HIGD1BQ9P298 99 aa11.47□□□□□ -0.57
USP42-205ENST00000465073 LINC00313P59037 77 aa11.46□□□□□ -0.57
USP42-205ENST00000465073 SSPOA2VEC9 5147 aa11.46□□□□□ -0.58
USP42-205ENST00000465073 A0A1W2PNM2 257 aa11.45□□□□□ -0.58
USP42-205ENST00000465073 C14orf144Q96I85 54 aa11.45□□□□□ -0.58
USP42-205ENST00000465073 FAM236DA0A1B0GTK5 79 aa11.44□□□□□ -0.58
USP42-205ENST00000465073 KRTAP16-1A8MUX0 517 aa11.44□□□□□ -0.58
USP42-205ENST00000465073 FAM236CP0DP71 79 aa11.44□□□□□ -0.58
USP42-205ENST00000465073 MT2AP02795 61 aa11.42□□□□□ -0.58
USP42-205ENST00000465073 IGKV4-1P06312 121 aa11.41□□□□□ -0.58
USP42-205ENST00000465073 PRO1854Q9UHT4 67 aa11.41□□□□□ -0.58
USP42-205ENST00000465073 RBM12B-AS1Q9P1G2 102 aa11.39□□□□□ -0.59
USP42-205ENST00000465073 TRBV7-4A0A0J9YYF1 115 aa11.38□□□□□ -0.59
USP42-205ENST00000465073 ANKRD29Q8N6D5 301 aa11.38□□□□□ -0.59
USP42-205ENST00000465073 C2orf91Q6ZV80 131 aa11.38□□□□□ -0.59
USP42-205ENST00000465073 CEND1Q8N111 149 aa11.38□□□□□ -0.59
USP42-205ENST00000465073 SPATA45Q537H7 98 aa11.37□□□□□ -0.59
USP42-205ENST00000465073 MPLKIPQ8TAP9 179 aa11.37□□□□□ -0.59
USP42-205ENST00000465073 PAM16Q9Y3D7 125 aa11.37□□□□□ -0.59
USP42-205ENST00000465073 TMEM238LA0A1B0GVL6 79 aa11.36□□□□□ -0.59
USP42-205ENST00000465073 A6NJY4 79 aa11.36□□□□□ -0.59
USP42-205ENST00000465073 HRES1P13985 223 aa11.34□□□□□ -0.59
USP42-205ENST00000465073 NOTCH2NLQ7Z3S9 236 aa11.34□□□□□ -0.59
USP42-205ENST00000465073 H3BQ85 93 aa11.33□□□□□ -0.6
USP42-205ENST00000465073 TRIAP1O43715 76 aa11.33□□□□□ -0.6
USP42-205ENST00000465073 MT1FP04733 61 aa11.32□□□□□ -0.6
USP42-205ENST00000465073 LINC00472Q9H8W2 130 aa11.32□□□□□ -0.6
USP42-205ENST00000465073 ORMDL1Q9P0S3 153 aa11.32□□□□□ -0.6
USP42-205ENST00000465073 DNAL4O96015 105 aa11.31□□□□□ -0.6
USP42-205ENST00000465073 S100A1P23297 94 aa11.31□□□□□ -0.6
USP42-205ENST00000465073 VAMP8Q9BV40 100 aa11.31□□□□□ -0.6
USP42-205ENST00000465073 DEFB116Q30KQ4 102 aa11.3□□□□□ -0.6
USP42-205ENST00000465073 LCE2BO14633 110 aa11.29□□□□□ -0.6
USP42-205ENST00000465073 KRTAP10-10P60014 251 aa11.29□□□□□ -0.6
USP42-205ENST00000465073 FCGBPQ9Y6R7 5405 aaPredicted RBP11.28□□□□□ -0.6
USP42-205ENST00000465073 A0A1B0GV72 72 aa11.28□□□□□ -0.6
USP42-205ENST00000465073 FXYD2P54710 66 aa11.28□□□□□ -0.6
USP42-205ENST00000465073 IGHV6-1A0A0B4J1U7 121 aa11.27□□□□□ -0.6
USP42-205ENST00000465073 KRTAP9-3Q9BYQ3 159 aa11.27□□□□□ -0.6
USP42-205ENST00000465073 TMEM256-PLSCR3K7ERE1 68 aa11.26□□□□□ -0.61
USP42-205ENST00000465073 CCKP06307 115 aa11.26□□□□□ -0.61
USP42-205ENST00000465073 TRACP01848 142 aa11.25□□□□□ -0.61
USP42-205ENST00000465073 KRTAP19-1Q8IUB9 90 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 147.1 ms