RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 DNAH9Q9NYC9 4486 aa7.42□□□□□ -1.22
PDZRN3-203ENST00000462146 FBN1P35555 2871 aaKnown RBP7.42□□□□□ -1.22
PDZRN3-203ENST00000462146 HCG22E2RYF7 251 aa7.42□□□□□ -1.22
PDZRN3-203ENST00000462146 WFDC13Q8IUB5 93 aa7.42□□□□□ -1.22
PDZRN3-203ENST00000462146 PRB2P02812 416 aaPredicted RBP7.41□□□□□ -1.22
PDZRN3-203ENST00000462146 RPL37AP61513 92 aaKnown RBP7.41□□□□□ -1.22
PDZRN3-203ENST00000462146 HUWE1Q7Z6Z7 4374 aaKnown RBP7.41□□□□□ -1.22
PDZRN3-203ENST00000462146 IGKV2-24A0A0C4DH68 120 aa7.4□□□□□ -1.23
PDZRN3-203ENST00000462146 A0A087WSZ3 146 aa7.39□□□□□ -1.23
PDZRN3-203ENST00000462146 A0A096LNI7 61 aa7.38□□□□□ -1.23
PDZRN3-203ENST00000462146 KRTAP11-1Q8IUC1 163 aa7.35□□□□□ -1.23
PDZRN3-203ENST00000462146 NBEAL1Q6ZS30 2694 aa7.35□□□□□ -1.23
PDZRN3-203ENST00000462146 COL6A5A8TX70 2615 aa7.35□□□□□ -1.23
PDZRN3-203ENST00000462146 KRTAP1-5Q9BYS1 174 aa7.34□□□□□ -1.23
PDZRN3-203ENST00000462146 PSPHP1O15172 72 aa7.34□□□□□ -1.24
PDZRN3-203ENST00000462146 CHTF8P0CG12 524 aa7.32□□□□□ -1.24
PDZRN3-203ENST00000462146 LINC00208Q96KT6 92 aa7.32□□□□□ -1.24
PDZRN3-203ENST00000462146 UBE2AP49459 152 aa7.31□□□□□ -1.24
PDZRN3-203ENST00000462146 Q1T7F1 81 aa7.31□□□□□ -1.24
PDZRN3-203ENST00000462146 DNAH7Q8WXX0 4024 aa7.31□□□□□ -1.24
PDZRN3-203ENST00000462146 CYP4F30PQ9H0H9 118 aa7.31□□□□□ -1.24
PDZRN3-203ENST00000462146 TRAV22A0A0B4J277 110 aa7.31□□□□□ -1.24
PDZRN3-203ENST00000462146 PHF5AQ7RTV0 110 aaKnown RBP7.31□□□□□ -1.24
PDZRN3-203ENST00000462146 MDFIQ99750 246 aa7.31□□□□□ -1.24
PDZRN3-203ENST00000462146 IGLV8-61A0A075B6I0 122 aa7.3□□□□□ -1.24
PDZRN3-203ENST00000462146 KRTAP29-1A8MX34 341 aaPredicted RBP7.3□□□□□ -1.24
PDZRN3-203ENST00000462146 C16orf90A8MZG2 172 aa7.3□□□□□ -1.24
PDZRN3-203ENST00000462146 C1orf195Q5TG92 126 aa7.3□□□□□ -1.24
PDZRN3-203ENST00000462146 CNBPP62633 177 aaKnown RBP7.29□□□□□ -1.24
PDZRN3-203ENST00000462146 MP68P56378 58 aa7.28□□□□□ -1.24
PDZRN3-203ENST00000462146 CASC2Q6XLA1 102 aa7.28□□□□□ -1.24
PDZRN3-203ENST00000462146 H0Y9P7 68 aa7.27□□□□□ -1.25
PDZRN3-203ENST00000462146 COL7A1Q02388 2944 aa7.26□□□□□ -1.25
PDZRN3-203ENST00000462146 TENM2Q9NT68 2774 aa7.26□□□□□ -1.25
PDZRN3-203ENST00000462146 KRTAP21-3Q3LHN1 58 aa7.26□□□□□ -1.25
PDZRN3-203ENST00000462146 A8MUN3 132 aa7.25□□□□□ -1.25
PDZRN3-203ENST00000462146 NDUFB1O75438 58 aa7.25□□□□□ -1.25
PDZRN3-203ENST00000462146 PRR15Q8IV56 129 aa7.25□□□□□ -1.25
PDZRN3-203ENST00000462146 A8MU10 97 aa7.25□□□□□ -1.25
PDZRN3-203ENST00000462146 B9D2Q9BPU9 175 aa7.25□□□□□ -1.25
PDZRN3-203ENST00000462146 LINC00472Q9H8W2 130 aa7.24□□□□□ -1.25
PDZRN3-203ENST00000462146 A8MWP4 228 aa7.22□□□□□ -1.25
PDZRN3-203ENST00000462146 K7EIL1 84 aa7.22□□□□□ -1.25
PDZRN3-203ENST00000462146 STAB2Q8WWQ8 2551 aa7.22□□□□□ -1.25
PDZRN3-203ENST00000462146 H0Y9J4 135 aa7.21□□□□□ -1.26
PDZRN3-203ENST00000462146 PANO1I0J062 215 aa7.2□□□□□ -1.26
PDZRN3-203ENST00000462146 SPRR1BP22528 89 aa7.2□□□□□ -1.26
PDZRN3-203ENST00000462146 MMP24-AS1A0A0U1RRL7 71 aa7.19□□□□□ -1.26
PDZRN3-203ENST00000462146 Q5VV11 94 aa7.19□□□□□ -1.26
PDZRN3-203ENST00000462146 C9orf163Q8N9P6 203 aa7.18□□□□□ -1.26
PDZRN3-203ENST00000462146 DNHD1Q96M86 4753 aa7.17□□□□□ -1.26
PDZRN3-203ENST00000462146 UBE2DNLQ8IWF7 75 aa7.17□□□□□ -1.26
PDZRN3-203ENST00000462146 SPANXA2-OT1Q8N9U9 137 aa7.17□□□□□ -1.26
PDZRN3-203ENST00000462146 V9GYY9 64 aa7.17□□□□□ -1.26
PDZRN3-203ENST00000462146 PLECQ15149 4684 aaKnown RBP7.17□□□□□ -1.26
PDZRN3-203ENST00000462146 Q8N9P0 234 aaPredicted RBP7.17□□□□□ -1.26
PDZRN3-203ENST00000462146 FRAS1Q86XX4 4008 aa7.16□□□□□ -1.26
PDZRN3-203ENST00000462146 IGLV9-49A0A0B4J1Y8 123 aa7.15□□□□□ -1.26
PDZRN3-203ENST00000462146 H3BPC8 53 aa7.15□□□□□ -1.27
PDZRN3-203ENST00000462146 PCOTHQ58A44 107 aa7.15□□□□□ -1.27
PDZRN3-203ENST00000462146 Q96NJ1 140 aa7.14□□□□□ -1.27
PDZRN3-203ENST00000462146 PRR15LQ9BU68 103 aa7.13□□□□□ -1.27
PDZRN3-203ENST00000462146 MGAM2Q2M2H8 2515 aa7.13□□□□□ -1.27
PDZRN3-203ENST00000462146 KRTAP13-1Q8IUC0 172 aa7.13□□□□□ -1.27
PDZRN3-203ENST00000462146 DYNC2H1Q8NCM8 4307 aaKnown RBP7.13□□□□□ -1.27
PDZRN3-203ENST00000462146 COA5Q86WW8 74 aa7.12□□□□□ -1.27
PDZRN3-203ENST00000462146 APLNQ9ULZ1 77 aa7.12□□□□□ -1.27
PDZRN3-203ENST00000462146 CHKB-CPT1BH3BT56 60 aa7.11□□□□□ -1.27
PDZRN3-203ENST00000462146 CD164Q04900 197 aa7.1□□□□□ -1.27
PDZRN3-203ENST00000462146 PMAIP1Q13794 54 aa7.1□□□□□ -1.27
PDZRN3-203ENST00000462146 C14orf177Q52M58 125 aa7.1□□□□□ -1.27
PDZRN3-203ENST00000462146 DNAH8Q96JB1 4490 aa7.09□□□□□ -1.27
PDZRN3-203ENST00000462146 MOBPQ13875 183 aa7.09□□□□□ -1.27
PDZRN3-203ENST00000462146 IGLV7-46A0A075B6I9 117 aa7.09□□□□□ -1.27
PDZRN3-203ENST00000462146 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.09□□□□□ -1.27
PDZRN3-203ENST00000462146 LIMD2Q9BT23 127 aa7.08□□□□□ -1.28
PDZRN3-203ENST00000462146 IGHV6-1A0A0B4J1U7 121 aa7.07□□□□□ -1.28
PDZRN3-203ENST00000462146 C8orf17Q9NRJ1 99 aa7.07□□□□□ -1.28
PDZRN3-203ENST00000462146 ANAPC11Q9NYG5 84 aa7.07□□□□□ -1.28
PDZRN3-203ENST00000462146 ASB16-AS1Q495Z4 193 aa7.07□□□□□ -1.28
PDZRN3-203ENST00000462146 NDUFS5O43920 106 aa7.06□□□□□ -1.28
PDZRN3-203ENST00000462146 SEC61GP60059 68 aa7.06□□□□□ -1.28
PDZRN3-203ENST00000462146 HECTD4Q9Y4D8 3996 aa7.06□□□□□ -1.28
PDZRN3-203ENST00000462146 A0A087X002 238 aa7.05□□□□□ -1.28
PDZRN3-203ENST00000462146 NOTCH2NLQ7Z3S9 236 aa7.05□□□□□ -1.28
PDZRN3-203ENST00000462146 LCA10Q71F78 164 aa7.04□□□□□ -1.28
PDZRN3-203ENST00000462146 Q6ZRN7 208 aaPredicted RBP7.04□□□□□ -1.28
PDZRN3-203ENST00000462146 STARD9Q9P2P6 4700 aa7.04□□□□□ -1.28
PDZRN3-203ENST00000462146 NBDYA0A0U1RRE5 68 aa7.03□□□□□ -1.28
PDZRN3-203ENST00000462146 SPAG11AQ6PDA7 123 aa7.03□□□□□ -1.28
PDZRN3-203ENST00000462146 Q6ZR54 194 aa7.03□□□□□ -1.28
PDZRN3-203ENST00000462146 SPACA4Q8TDM5 124 aa7.03□□□□□ -1.28
PDZRN3-203ENST00000462146 SPTSSBQ8NFR3 76 aa7.02□□□□□ -1.29
PDZRN3-203ENST00000462146 Q75L30 129 aa7.02□□□□□ -1.29
PDZRN3-203ENST00000462146 A0A1B0GVX0 72 aa7.01□□□□□ -1.29
PDZRN3-203ENST00000462146 A6NED7 52 aa7.01□□□□□ -1.29
PDZRN3-203ENST00000462146 TP53AIP1Q9HCN2 124 aa7.01□□□□□ -1.29
PDZRN3-203ENST00000462146 WWC2-AS2Q96NR7 200 aa7.01□□□□□ -1.29
PDZRN3-203ENST00000462146 LOC101927531A0A1B0GV80 90 aa7□□□□□ -1.29
PDZRN3-203ENST00000462146 LINC00483Q53H64 154 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms