RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 A4D1N5 150 aa5.03□□□□□ -1.6
BRCA1-207ENST00000461798 LINC01547P58512 204 aaPredicted RBP5.03□□□□□ -1.6
BRCA1-207ENST00000461798 Q5XG85 94 aa5.03□□□□□ -1.6
BRCA1-207ENST00000461798 PCP2Q8IVA1 136 aa5.03□□□□□ -1.6
BRCA1-207ENST00000461798 MUSTN1Q8IVN3 82 aa5.03□□□□□ -1.6
BRCA1-207ENST00000461798 A6NDN8 102 aa5.02□□□□□ -1.61
BRCA1-207ENST00000461798 ATOH7Q8N100 152 aa5.02□□□□□ -1.61
BRCA1-207ENST00000461798 DEFB105AQ8NG35 78 aa5.02□□□□□ -1.61
BRCA1-207ENST00000461798 TRAV13-2A0A0B4J235 113 aa5.01□□□□□ -1.61
BRCA1-207ENST00000461798 Q1RN00 199 aa5.01□□□□□ -1.61
BRCA1-207ENST00000461798 HRCT1Q6UXD1 115 aa5.01□□□□□ -1.61
BRCA1-207ENST00000461798 H7C2G1 150 aa5□□□□□ -1.61
BRCA1-207ENST00000461798 SMIM11BQ8TCY0 68 aa4.99□□□□□ -1.61
BRCA1-207ENST00000461798 NHP2Q9NX24 153 aaKnown RBP4.99□□□□□ -1.61
BRCA1-207ENST00000461798 HIST3H2BBQ8N257 126 aa4.98□□□□□ -1.61
BRCA1-207ENST00000461798 C1orf195Q5TG92 126 aa4.97□□□□□ -1.61
BRCA1-207ENST00000461798 HIST1H2BLQ99880 126 aa4.97□□□□□ -1.61
BRCA1-207ENST00000461798 VAMP3Q15836 100 aa4.96□□□□□ -1.62
BRCA1-207ENST00000461798 PCOTHQ58A44 107 aa4.96□□□□□ -1.62
BRCA1-207ENST00000461798 C9orf92A6NGG3 77 aa4.95□□□□□ -1.62
BRCA1-207ENST00000461798 S100A2P29034 98 aa4.95□□□□□ -1.62
BRCA1-207ENST00000461798 KRTAP19-2Q3LHN2 52 aa4.95□□□□□ -1.62
BRCA1-207ENST00000461798 LINC00575Q6W349 94 aa4.95□□□□□ -1.62
BRCA1-207ENST00000461798 A0A0G2JQZ4 141 aa4.94□□□□□ -1.62
BRCA1-207ENST00000461798 HSBP1L1C9JCN9 74 aa4.94□□□□□ -1.62
BRCA1-207ENST00000461798 IGLV8-61A0A075B6I0 122 aa4.93□□□□□ -1.62
BRCA1-207ENST00000461798 hADV29S1A0JD25 119 aa4.92□□□□□ -1.62
BRCA1-207ENST00000461798 TCL1BO95988 128 aa4.92□□□□□ -1.62
BRCA1-207ENST00000461798 S100A1P23297 94 aa4.92□□□□□ -1.62
BRCA1-207ENST00000461798 Q6JHZ5 121 aa4.92□□□□□ -1.62
BRCA1-207ENST00000461798 F8WEM9 126 aa4.91□□□□□ -1.62
BRCA1-207ENST00000461798 Q6ZQY7 126 aa4.91□□□□□ -1.62
BRCA1-207ENST00000461798 DLEU1O43261 78 aa4.9□□□□□ -1.63
BRCA1-207ENST00000461798 S100A6P06703 90 aa4.9□□□□□ -1.63
BRCA1-207ENST00000461798 RPL37P61927 97 aaKnown RBP4.9□□□□□ -1.63
BRCA1-207ENST00000461798 OCIAD2Q56VL3 154 aa4.9□□□□□ -1.63
BRCA1-207ENST00000461798 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.9□□□□□ -1.63
BRCA1-207ENST00000461798 PPDPFLQ8WWR9 84 aa4.9□□□□□ -1.63
BRCA1-207ENST00000461798 COX8AP10176 69 aa4.89□□□□□ -1.63
BRCA1-207ENST00000461798 MT1HP80294 61 aa4.89□□□□□ -1.63
BRCA1-207ENST00000461798 BVES-AS1Q5T3Y7 98 aa4.89□□□□□ -1.63
BRCA1-207ENST00000461798 KRTAP3-1Q9BYR8 98 aa4.89□□□□□ -1.63
BRCA1-207ENST00000461798 TRBV7-7A0A0K0K1E9 115 aa4.88□□□□□ -1.63
BRCA1-207ENST00000461798 SCGB1D1O95968 90 aa4.88□□□□□ -1.63
BRCA1-207ENST00000461798 IGFL1Q6UW32 110 aa4.88□□□□□ -1.63
BRCA1-207ENST00000461798 CLEC2BQ92478 149 aa4.88□□□□□ -1.63
BRCA1-207ENST00000461798 HIST1H4GQ99525 98 aa4.88□□□□□ -1.63
BRCA1-207ENST00000461798 TMEM238LA0A1B0GVL6 79 aa4.86□□□□□ -1.63
BRCA1-207ENST00000461798 CFC1BP0CG36 223 aa4.85□□□□□ -1.63
BRCA1-207ENST00000461798 CFC1P0CG37 223 aa4.85□□□□□ -1.63
BRCA1-207ENST00000461798 C12orf57Q99622 126 aa4.85□□□□□ -1.63
BRCA1-207ENST00000461798 SNHG12Q9BXW3 62 aa4.85□□□□□ -1.63
BRCA1-207ENST00000461798 HIGD1BQ9P298 99 aa4.85□□□□□ -1.63
BRCA1-207ENST00000461798 H0YGX0 51 aa4.84□□□□□ -1.63
BRCA1-207ENST00000461798 Q6Q795 121 aa4.84□□□□□ -1.63
BRCA1-207ENST00000461798 A0A0B4J2C4 111 aa4.83□□□□□ -1.64
BRCA1-207ENST00000461798 SNCGO76070 127 aa4.82□□□□□ -1.64
BRCA1-207ENST00000461798 Q75L30 129 aa4.82□□□□□ -1.64
BRCA1-207ENST00000461798 RAB37Q96AX2 223 aa4.82□□□□□ -1.64
BRCA1-207ENST00000461798 C14orf144Q96I85 54 aa4.82□□□□□ -1.64
BRCA1-207ENST00000461798 A0A1B0GX51 115 aa4.81□□□□□ -1.64
BRCA1-207ENST00000461798 H3BUT2 72 aa4.81□□□□□ -1.64
BRCA1-207ENST00000461798 LST1O00453 97 aa4.81□□□□□ -1.64
BRCA1-207ENST00000461798 C2orf91Q6ZV80 131 aa4.81□□□□□ -1.64
BRCA1-207ENST00000461798 NDUFV3P56181 108 aaKnown RBP4.8□□□□□ -1.64
BRCA1-207ENST00000461798 KRTAP10-6P60371 365 aaPredicted RBP4.8□□□□□ -1.64
BRCA1-207ENST00000461798 SPATA45Q537H7 98 aa4.8□□□□□ -1.64
BRCA1-207ENST00000461798 TEN1Q86WV5 123 aa4.8□□□□□ -1.64
BRCA1-207ENST00000461798 OBSCN-AS1Q96MR7 158 aa4.8□□□□□ -1.64
BRCA1-207ENST00000461798 FAM218AQ96MZ4 157 aa4.8□□□□□ -1.64
BRCA1-207ENST00000461798 SS18L2Q9UHA2 77 aa4.8□□□□□ -1.64
BRCA1-207ENST00000461798 ATP11AUNQ6ZP68 121 aa4.79□□□□□ -1.64
BRCA1-207ENST00000461798 PAM16Q9Y3D7 125 aa4.79□□□□□ -1.64
BRCA1-207ENST00000461798 COX6B2Q6YFQ2 88 aa4.78□□□□□ -1.64
BRCA1-207ENST00000461798 CEND1Q8N111 149 aa4.78□□□□□ -1.64
BRCA1-207ENST00000461798 VAMP8Q9BV40 100 aa4.78□□□□□ -1.64
BRCA1-207ENST00000461798 CRCT1Q9UGL9 99 aa4.78□□□□□ -1.64
BRCA1-207ENST00000461798 PRO1854Q9UHT4 67 aa4.78□□□□□ -1.64
BRCA1-207ENST00000461798 FLGP20930 4061 aaPredicted RBP4.76□□□□□ -1.65
BRCA1-207ENST00000461798 A8MUU9 505 aa4.76□□□□□ -1.65
BRCA1-207ENST00000461798 H3BMG7 143 aa4.76□□□□□ -1.65
BRCA1-207ENST00000461798 Q96NJ1 140 aa4.76□□□□□ -1.65
BRCA1-207ENST00000461798 C20orf166-AS1Q96NR2 134 aa4.76□□□□□ -1.65
BRCA1-207ENST00000461798 A0A087WSZ3 146 aa4.75□□□□□ -1.65
BRCA1-207ENST00000461798 M0R2T5 61 aa4.75□□□□□ -1.65
BRCA1-207ENST00000461798 FXYD2P54710 66 aa4.75□□□□□ -1.65
BRCA1-207ENST00000461798 FABP2P12104 132 aa4.74□□□□□ -1.65
BRCA1-207ENST00000461798 A0A1W2PNM2 257 aa4.73□□□□□ -1.65
BRCA1-207ENST00000461798 H3BQ85 93 aa4.73□□□□□ -1.65
BRCA1-207ENST00000461798 TRIAP1O43715 76 aa4.73□□□□□ -1.65
BRCA1-207ENST00000461798 FSIP2Q5CZC0 6907 aa4.72□□□□□ -1.65
BRCA1-207ENST00000461798 TRBV7-4A0A0J9YYF1 115 aa4.71□□□□□ -1.66
BRCA1-207ENST00000461798 HSD52Q0P140 79 aa4.71□□□□□ -1.66
BRCA1-207ENST00000461798 PYY3Q5JQD4 70 aa4.7□□□□□ -1.66
BRCA1-207ENST00000461798 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.7□□□□□ -1.66
BRCA1-207ENST00000461798 ANKRD29Q8N6D5 301 aa4.7□□□□□ -1.66
BRCA1-207ENST00000461798 ORMDL1Q9P0S3 153 aa4.7□□□□□ -1.66
BRCA1-207ENST00000461798 TMEM256-PLSCR3K7ERE1 68 aa4.69□□□□□ -1.66
BRCA1-207ENST00000461798 DNAL4O96015 105 aa4.68□□□□□ -1.66
BRCA1-207ENST00000461798 COX6CP09669 75 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 169.6 ms