RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 LINC01545Q5VT33 79 aa7.32□□□□□ -1.24
LYSMD3-202ENST00000453259 TRAV13-2A0A0B4J235 113 aa7.31□□□□□ -1.24
LYSMD3-202ENST00000453259 PET117Q6UWS5 81 aa7.3□□□□□ -1.24
LYSMD3-202ENST00000453259 SCGB1D4Q6XE38 83 aa7.3□□□□□ -1.24
LYSMD3-202ENST00000453259 FCGBPQ9Y6R7 5405 aaPredicted RBP7.3□□□□□ -1.24
LYSMD3-202ENST00000453259 VAMP3Q15836 100 aa7.28□□□□□ -1.24
LYSMD3-202ENST00000453259 C20orf166-AS1Q96NR2 134 aa7.28□□□□□ -1.24
LYSMD3-202ENST00000453259 IGFL1Q6UW32 110 aa7.26□□□□□ -1.25
LYSMD3-202ENST00000453259 SMIM11BQ8TCY0 68 aa7.26□□□□□ -1.25
LYSMD3-202ENST00000453259 PPDPFLQ8WWR9 84 aa7.26□□□□□ -1.25
LYSMD3-202ENST00000453259 Q96NJ1 140 aa7.26□□□□□ -1.25
LYSMD3-202ENST00000453259 TTTY13Q9BZ97 58 aa7.26□□□□□ -1.25
LYSMD3-202ENST00000453259 LST1O00453 97 aa7.25□□□□□ -1.25
LYSMD3-202ENST00000453259 SCGB1D1O95968 90 aa7.25□□□□□ -1.25
LYSMD3-202ENST00000453259 A8MUU9 505 aa7.24□□□□□ -1.25
LYSMD3-202ENST00000453259 MT2AP02795 61 aa7.24□□□□□ -1.25
LYSMD3-202ENST00000453259 OCIAD2Q56VL3 154 aa7.24□□□□□ -1.25
LYSMD3-202ENST00000453259 LINC00575Q6W349 94 aa7.24□□□□□ -1.25
LYSMD3-202ENST00000453259 KRTAP19-1Q8IUB9 90 aa7.24□□□□□ -1.25
LYSMD3-202ENST00000453259 SS18L2Q9UHA2 77 aa7.24□□□□□ -1.25
LYSMD3-202ENST00000453259 Q6ZQY7 126 aa7.23□□□□□ -1.25
LYSMD3-202ENST00000453259 SLC7A5P1Q8MH63 180 aa7.23□□□□□ -1.25
LYSMD3-202ENST00000453259 LINC00846Q9NV44 126 aa7.23□□□□□ -1.25
LYSMD3-202ENST00000453259 hADV29S1A0JD25 119 aa7.22□□□□□ -1.25
LYSMD3-202ENST00000453259 MUSTN1Q8IVN3 82 aa7.22□□□□□ -1.25
LYSMD3-202ENST00000453259 COLCA2A8K830 154 aa7.19□□□□□ -1.26
LYSMD3-202ENST00000453259 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.19□□□□□ -1.26
LYSMD3-202ENST00000453259 MT1FP04733 61 aa7.17□□□□□ -1.26
LYSMD3-202ENST00000453259 C3orf79P0CE67 100 aa7.17□□□□□ -1.26
LYSMD3-202ENST00000453259 KRTAP9-3Q9BYQ3 159 aa7.17□□□□□ -1.26
LYSMD3-202ENST00000453259 FAM236DA0A1B0GTK5 79 aa7.16□□□□□ -1.26
LYSMD3-202ENST00000453259 HIST1H2BKO60814 126 aa7.16□□□□□ -1.26
LYSMD3-202ENST00000453259 HIST1H2BJP06899 126 aa7.16□□□□□ -1.26
LYSMD3-202ENST00000453259 FAM236CP0DP71 79 aa7.16□□□□□ -1.26
LYSMD3-202ENST00000453259 HIST1H2BOP23527 126 aa7.16□□□□□ -1.26
LYSMD3-202ENST00000453259 HIST1H2BBP33778 126 aa7.16□□□□□ -1.26
LYSMD3-202ENST00000453259 HIST1H2BDP58876 126 aa7.16□□□□□ -1.26
LYSMD3-202ENST00000453259 HIST1H2BCP62807 126 aa7.16□□□□□ -1.26
LYSMD3-202ENST00000453259 HIST2H2BEQ16778 126 aa7.16□□□□□ -1.26
LYSMD3-202ENST00000453259 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.16□□□□□ -1.26
LYSMD3-202ENST00000453259 HIST1H2BHQ93079 126 aa7.16□□□□□ -1.26
LYSMD3-202ENST00000453259 HIST1H2BNQ99877 126 aa7.16□□□□□ -1.26
LYSMD3-202ENST00000453259 HIST1H2BMQ99879 126 aa7.16□□□□□ -1.26
LYSMD3-202ENST00000453259 SNHG12Q9BXW3 62 aa7.16□□□□□ -1.26
LYSMD3-202ENST00000453259 MACF1Q9UPN3 7388 aaKnown RBP7.15□□□□□ -1.26
LYSMD3-202ENST00000453259 KRTAP10-10P60014 251 aa7.15□□□□□ -1.26
LYSMD3-202ENST00000453259 RBM12B-AS1Q9P1G2 102 aa7.15□□□□□ -1.26
LYSMD3-202ENST00000453259 KRTAP4-12Q9BQ66 201 aa7.14□□□□□ -1.27
LYSMD3-202ENST00000453259 ANKRD39Q53RE8 183 aa7.13□□□□□ -1.27
LYSMD3-202ENST00000453259 BVES-AS1Q5T3Y7 98 aa7.13□□□□□ -1.27
LYSMD3-202ENST00000453259 TEN1Q86WV5 123 aa7.13□□□□□ -1.27
LYSMD3-202ENST00000453259 SNRPEP62304 92 aaKnown RBP7.12□□□□□ -1.27
LYSMD3-202ENST00000453259 MPLKIPQ8TAP9 179 aa7.12□□□□□ -1.27
LYSMD3-202ENST00000453259 KRTDAPP60985 99 aa7.11□□□□□ -1.27
LYSMD3-202ENST00000453259 H3BS24 57 aa7.1□□□□□ -1.27
LYSMD3-202ENST00000453259 H3BUT2 72 aa7.09□□□□□ -1.27
LYSMD3-202ENST00000453259 KRTAP19-6Q3LI70 58 aa7.09□□□□□ -1.27
LYSMD3-202ENST00000453259 SYNE2Q8WXH0 6885 aaKnown RBP7.09□□□□□ -1.28
LYSMD3-202ENST00000453259 SNCGO76070 127 aa7.08□□□□□ -1.28
LYSMD3-202ENST00000453259 COA6Q5JTJ3 125 aaKnown RBP7.08□□□□□ -1.28
LYSMD3-202ENST00000453259 C12orf57Q99622 126 aa7.08□□□□□ -1.28
LYSMD3-202ENST00000453259 MTURNQ8N3F0 131 aa7.06□□□□□ -1.28
LYSMD3-202ENST00000453259 A0A087WSZ3 146 aa7.05□□□□□ -1.28
LYSMD3-202ENST00000453259 HRES1P13985 223 aa7.05□□□□□ -1.28
LYSMD3-202ENST00000453259 DSCR10P59022 87 aa7.04□□□□□ -1.28
LYSMD3-202ENST00000453259 LINC00313P59037 77 aa7.04□□□□□ -1.28
LYSMD3-202ENST00000453259 ATOH7Q8N100 152 aa7.04□□□□□ -1.28
LYSMD3-202ENST00000453259 KRTAP16-1A8MUX0 517 aa7.03□□□□□ -1.28
LYSMD3-202ENST00000453259 NDUFV3P56181 108 aaKnown RBP7.02□□□□□ -1.29
LYSMD3-202ENST00000453259 SIGMAR1Q99720 223 aa7.02□□□□□ -1.29
LYSMD3-202ENST00000453259 KRTAP6-3Q3LI67 103 aa6.99□□□□□ -1.29
LYSMD3-202ENST00000453259 NOTCH2NLQ7Z3S9 236 aa6.99□□□□□ -1.29
LYSMD3-202ENST00000453259 H0YGX0 51 aa6.98□□□□□ -1.29
LYSMD3-202ENST00000453259 HSBP1L1C9JCN9 74 aa6.97□□□□□ -1.29
LYSMD3-202ENST00000453259 H3BMG7 143 aa6.97□□□□□ -1.29
LYSMD3-202ENST00000453259 A8MWP4 228 aa6.95□□□□□ -1.3
LYSMD3-202ENST00000453259 IGKV4-1P06312 121 aa6.95□□□□□ -1.3
LYSMD3-202ENST00000453259 A0A1B0GX51 115 aa6.94□□□□□ -1.3
LYSMD3-202ENST00000453259 LCE3BQ5TA77 95 aa6.94□□□□□ -1.3
LYSMD3-202ENST00000453259 TRBV7-4A0A0J9YYF1 115 aa6.93□□□□□ -1.3
LYSMD3-202ENST00000453259 HIST1H4GQ99525 98 aa6.93□□□□□ -1.3
LYSMD3-202ENST00000453259 A0A1W2PNM2 257 aa6.91□□□□□ -1.3
LYSMD3-202ENST00000453259 C8orf87E5RJ46 101 aa6.88□□□□□ -1.31
LYSMD3-202ENST00000453259 FABP2P12104 132 aa6.88□□□□□ -1.31
LYSMD3-202ENST00000453259 RAB37Q96AX2 223 aa6.88□□□□□ -1.31
LYSMD3-202ENST00000453259 FAM218AQ96MZ4 157 aa6.88□□□□□ -1.31
LYSMD3-202ENST00000453259 H3BQ85 93 aa6.87□□□□□ -1.31
LYSMD3-202ENST00000453259 LINC00472Q9H8W2 130 aa6.87□□□□□ -1.31
LYSMD3-202ENST00000453259 IGHV6-1A0A0B4J1U7 121 aa6.86□□□□□ -1.31
LYSMD3-202ENST00000453259 A0A0B4J2C4 111 aa6.86□□□□□ -1.31
LYSMD3-202ENST00000453259 ANKRD29Q8N6D5 301 aa6.86□□□□□ -1.31
LYSMD3-202ENST00000453259 SPINK7P58062 85 aa6.85□□□□□ -1.31
LYSMD3-202ENST00000453259 ZCCHC13Q8WW36 166 aaKnown RBP6.85□□□□□ -1.31
LYSMD3-202ENST00000453259 KRTAP9-9Q9BYP9 154 aa6.85□□□□□ -1.31
LYSMD3-202ENST00000453259 KRTAP9-4Q9BYQ2 154 aa6.85□□□□□ -1.31
LYSMD3-202ENST00000453259 DLEU1O43261 78 aa6.83□□□□□ -1.32
LYSMD3-202ENST00000453259 A0A1B0GVX0 72 aa6.82□□□□□ -1.32
LYSMD3-202ENST00000453259 COX8AP10176 69 aa6.82□□□□□ -1.32
LYSMD3-202ENST00000453259 TRACP01848 142 aa6.81□□□□□ -1.32
LYSMD3-202ENST00000453259 S100A2P29034 98 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 149.7 ms