RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 ABCA2Q9BZC7 2435 aa1.55□□□□□ -2.16
HMGB3P21-201ENST00000452483 MUC19Q7Z5P9 8384 aa1.55□□□□□ -2.16
HMGB3P21-201ENST00000452483 GCC2Q8IWJ2 1684 aa1.55□□□□□ -2.16
HMGB3P21-201ENST00000452483 SETD2Q9BYW2 2564 aaPredicted RBP1.54□□□□□ -2.16
HMGB3P21-201ENST00000452483 WFDC10BQ8IUB3 73 aa1.54□□□□□ -2.16
HMGB3P21-201ENST00000452483 WNK2Q9Y3S1 2297 aa1.54□□□□□ -2.16
HMGB3P21-201ENST00000452483 PTPN13Q12923 2485 aa1.52□□□□□ -2.17
HMGB3P21-201ENST00000452483 NOTCH1P46531 2555 aa1.52□□□□□ -2.17
HMGB3P21-201ENST00000452483 KRTAP5-7Q6L8G8 165 aa1.52□□□□□ -2.17
HMGB3P21-201ENST00000452483 KRTAP10-4P60372 401 aaPredicted RBP1.51□□□□□ -2.17
HMGB3P21-201ENST00000452483 WT1-ASQ06250 92 aa1.51□□□□□ -2.17
HMGB3P21-201ENST00000452483 SPTBN2O15020 2390 aa1.5□□□□□ -2.17
HMGB3P21-201ENST00000452483 KAAG1Q9UBP8 84 aa1.5□□□□□ -2.17
HMGB3P21-201ENST00000452483 NAV2Q8IVL1 2488 aa1.5□□□□□ -2.17
HMGB3P21-201ENST00000452483 CLTCL1P53675 1640 aa1.5□□□□□ -2.17
HMGB3P21-201ENST00000452483 PKDREJQ9NTG1 2253 aa1.5□□□□□ -2.17
HMGB3P21-201ENST00000452483 HELZ2Q9BYK8 2649 aaKnown RBP1.5□□□□□ -2.17
HMGB3P21-201ENST00000452483 STAB1Q9NY15 2570 aa1.5□□□□□ -2.17
HMGB3P21-201ENST00000452483 HIVEP2P31629 2446 aa1.49□□□□□ -2.17
HMGB3P21-201ENST00000452483 H3BUA1 57 aa1.48□□□□□ -2.17
HMGB3P21-201ENST00000452483 CACNA1HO95180 2353 aa1.46□□□□□ -2.18
HMGB3P21-201ENST00000452483 FBN3Q75N90 2809 aa1.46□□□□□ -2.18
HMGB3P21-201ENST00000452483 CEP350Q5VT06 3117 aa1.46□□□□□ -2.18
HMGB3P21-201ENST00000452483 SPTBN1Q01082 2364 aaKnown RBP1.45□□□□□ -2.18
HMGB3P21-201ENST00000452483 NCOR2Q9Y618 2525 aa1.45□□□□□ -2.18
HMGB3P21-201ENST00000452483 PRLHP81277 87 aa1.45□□□□□ -2.18
HMGB3P21-201ENST00000452483 VWFP04275 2813 aa1.44□□□□□ -2.18
HMGB3P21-201ENST00000452483 HECTD1Q9ULT8 2610 aa1.43□□□□□ -2.18
HMGB3P21-201ENST00000452483 EPG5Q9HCE0 2579 aa1.43□□□□□ -2.18
HMGB3P21-201ENST00000452483 IGLV5-48A0A075B6I7 105 aa1.43□□□□□ -2.18
HMGB3P21-201ENST00000452483 DEFB109BQ30KR1 87 aa1.43□□□□□ -2.18
HMGB3P21-201ENST00000452483 S4R3F8 94 aa1.43□□□□□ -2.18
HMGB3P21-201ENST00000452483 MYO18BQ8IUG5 2567 aa1.43□□□□□ -2.18
HMGB3P21-201ENST00000452483 KIAA1109Q2LD37 5005 aa1.43□□□□□ -2.18
HMGB3P21-201ENST00000452483 CHD6Q8TD26 2715 aa1.42□□□□□ -2.18
HMGB3P21-201ENST00000452483 PCLOQ9Y6V0 5065 aa1.42□□□□□ -2.18
HMGB3P21-201ENST00000452483 ITPR3Q14573 2671 aa1.42□□□□□ -2.18
HMGB3P21-201ENST00000452483 KNL1Q8NG31 2342 aa1.42□□□□□ -2.18
HMGB3P21-201ENST00000452483 ANKHD1Q8IWZ3 2542 aaKnown RBP1.42□□□□□ -2.18
HMGB3P21-201ENST00000452483 DOPEY1Q5JWR5 2465 aa1.42□□□□□ -2.18
HMGB3P21-201ENST00000452483 REV3LO60673 3130 aa1.42□□□□□ -2.18
HMGB3P21-201ENST00000452483 COL6A5A8TX70 2615 aa1.41□□□□□ -2.18
HMGB3P21-201ENST00000452483 FLNBO75369 2602 aaKnown RBP1.41□□□□□ -2.18
HMGB3P21-201ENST00000452483 DEFB131AP59861 70 aa1.41□□□□□ -2.18
HMGB3P21-201ENST00000452483 DEFB106AQ8N104 65 aa1.41□□□□□ -2.18
HMGB3P21-201ENST00000452483 TTC28Q96AY4 2481 aa1.41□□□□□ -2.18
HMGB3P21-201ENST00000452483 A0A0C4DFX4 3053 aa1.41□□□□□ -2.18
HMGB3P21-201ENST00000452483 MUC2Q02817 5179 aa1.4□□□□□ -2.18
HMGB3P21-201ENST00000452483 ANKRD11Q6UB99 2663 aaPredicted RBP1.4□□□□□ -2.19
HMGB3P21-201ENST00000452483 ZNF292O60281 2723 aa1.4□□□□□ -2.19
HMGB3P21-201ENST00000452483 PIEZO1Q92508 2521 aa1.4□□□□□ -2.19
HMGB3P21-201ENST00000452483 TPRP12270 2363 aaKnown RBP1.39□□□□□ -2.19
HMGB3P21-201ENST00000452483 MEGF8Q7Z7M0 2845 aa1.39□□□□□ -2.19
HMGB3P21-201ENST00000452483 MACF1Q9UPN3 7388 aaKnown RBP1.38□□□□□ -2.19
HMGB3P21-201ENST00000452483 NCOR1O75376 2440 aa1.38□□□□□ -2.19
HMGB3P21-201ENST00000452483 PDE4DIPQ5VU43 2346 aa1.38□□□□□ -2.19
HMGB3P21-201ENST00000452483 MMP24-AS1A0A0U1RRL7 71 aa1.37□□□□□ -2.19
HMGB3P21-201ENST00000452483 MUC6Q6W4X9 2439 aa1.37□□□□□ -2.19
HMGB3P21-201ENST00000452483 PCNX1Q96RV3 2341 aa1.37□□□□□ -2.19
HMGB3P21-201ENST00000452483 IGF2RP11717 2491 aa1.37□□□□□ -2.19
HMGB3P21-201ENST00000452483 TNRC18O15417 2968 aaPredicted RBP1.36□□□□□ -2.19
HMGB3P21-201ENST00000452483 ABCA12Q86UK0 2595 aa1.36□□□□□ -2.19
HMGB3P21-201ENST00000452483 POLR2KP53803 58 aaKnown RBP1.36□□□□□ -2.19
HMGB3P21-201ENST00000452483 RPL39P62891 51 aaKnown RBP1.36□□□□□ -2.19
HMGB3P21-201ENST00000452483 F8P00451 2351 aa1.36□□□□□ -2.19
HMGB3P21-201ENST00000452483 GVINP1Q7Z2Y8 2422 aa1.36□□□□□ -2.19
HMGB3P21-201ENST00000452483 ARHGAP5-AS1Q96IT6 56 aa1.35□□□□□ -2.19
HMGB3P21-201ENST00000452483 PCNTO95613 3336 aa1.35□□□□□ -2.19
HMGB3P21-201ENST00000452483 POLQO75417 2590 aa1.35□□□□□ -2.19
HMGB3P21-201ENST00000452483 BDP1A6H8Y1 2624 aa1.35□□□□□ -2.19
HMGB3P21-201ENST00000452483 FASNP49327 2511 aaKnown RBP1.34□□□□□ -2.19
HMGB3P21-201ENST00000452483 LRRK2Q5S007 2527 aa1.34□□□□□ -2.19
HMGB3P21-201ENST00000452483 NOP10Q9NPE3 64 aaKnown RBP1.34□□□□□ -2.19
HMGB3P21-201ENST00000452483 CCDC168Q8NDH2 2452 aa1.34□□□□□ -2.2
HMGB3P21-201ENST00000452483 DSPP15924 2871 aaKnown RBP1.34□□□□□ -2.2
HMGB3P21-201ENST00000452483 CHD9Q3L8U1 2897 aa1.33□□□□□ -2.2
HMGB3P21-201ENST00000452483 WDFY4Q6ZS81 3184 aa1.32□□□□□ -2.2
HMGB3P21-201ENST00000452483 RPL39LQ96EH5 51 aaKnown RBP1.32□□□□□ -2.2
HMGB3P21-201ENST00000452483 CSPG4Q6UVK1 2322 aa1.32□□□□□ -2.2
HMGB3P21-201ENST00000452483 SPTBN4Q9H254 2564 aa1.31□□□□□ -2.2
HMGB3P21-201ENST00000452483 KRTAP21-2Q3LI59 83 aa1.31□□□□□ -2.2
HMGB3P21-201ENST00000452483 H0YGG7 62 aa1.29□□□□□ -2.2
HMGB3P21-201ENST00000452483 AHNAKQ09666 5890 aaKnown RBP1.29□□□□□ -2.2
HMGB3P21-201ENST00000452483 SPINK1P00995 79 aa1.28□□□□□ -2.2
HMGB3P21-201ENST00000452483 SPINK6Q6UWN8 80 aa1.28□□□□□ -2.2
HMGB3P21-201ENST00000452483 NBEAL2Q6ZNJ1 2754 aa1.28□□□□□ -2.2
HMGB3P21-201ENST00000452483 CELSR2Q9HCU4 2923 aa1.28□□□□□ -2.2
HMGB3P21-201ENST00000452483 KALRNO60229 2985 aa1.28□□□□□ -2.2
HMGB3P21-201ENST00000452483 SYNE2Q8WXH0 6885 aaKnown RBP1.27□□□□□ -2.21
HMGB3P21-201ENST00000452483 MYO9AB2RTY4 2548 aa1.27□□□□□ -2.21
HMGB3P21-201ENST00000452483 AKAP6Q13023 2319 aa1.27□□□□□ -2.21
HMGB3P21-201ENST00000452483 RYR1P21817 5038 aa1.27□□□□□ -2.21
HMGB3P21-201ENST00000452483 CELSR3Q9NYQ7 3312 aa1.27□□□□□ -2.21
HMGB3P21-201ENST00000452483 DEFB135Q30KP9 77 aa1.26□□□□□ -2.21
HMGB3P21-201ENST00000452483 LEAP2Q969E1 77 aa1.26□□□□□ -2.21
HMGB3P21-201ENST00000452483 TTTY10Q9BZA0 68 aa1.25□□□□□ -2.21
HMGB3P21-201ENST00000452483 TENM4Q6N022 2769 aa1.25□□□□□ -2.21
HMGB3P21-201ENST00000452483 GCN1Q92616 2671 aaKnown RBP1.25□□□□□ -2.21
HMGB3P21-201ENST00000452483 M0QY20 66 aa1.24□□□□□ -2.21
HMGB3P21-201ENST00000452483 CLPSL2Q6UWE3 100 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms