RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 A0A1B0GWB2 263 aa12.77□□□□□ -0.37
PMS1-214ENST00000446877 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.76□□□□□ -0.37
PMS1-214ENST00000446877 SCGB1D4Q6XE38 83 aa12.76□□□□□ -0.37
PMS1-214ENST00000446877 ATP11AUNQ6ZP68 121 aa12.72□□□□□ -0.37
PMS1-214ENST00000446877 PYY3Q5JQD4 70 aa12.71□□□□□ -0.37
PMS1-214ENST00000446877 VAMP8Q9BV40 100 aa12.71□□□□□ -0.37
PMS1-214ENST00000446877 USH2AO75445 5202 aa12.7□□□□□ -0.38
PMS1-214ENST00000446877 A6NDN8 102 aa12.7□□□□□ -0.38
PMS1-214ENST00000446877 SSPOA2VEC9 5147 aa12.7□□□□□ -0.38
PMS1-214ENST00000446877 A4D1N5 150 aa12.69□□□□□ -0.38
PMS1-214ENST00000446877 Q6ZVH6 145 aa12.69□□□□□ -0.38
PMS1-214ENST00000446877 CFC1P0CG37 223 aa12.68□□□□□ -0.38
PMS1-214ENST00000446877 COX8AP10176 69 aa12.68□□□□□ -0.38
PMS1-214ENST00000446877 SPATA45Q537H7 98 aa12.68□□□□□ -0.38
PMS1-214ENST00000446877 NHP2Q9NX24 153 aaKnown RBP12.68□□□□□ -0.38
PMS1-214ENST00000446877 PAM16Q9Y3D7 125 aa12.68□□□□□ -0.38
PMS1-214ENST00000446877 F8WEM9 126 aa12.67□□□□□ -0.38
PMS1-214ENST00000446877 COPS9Q8WXC6 57 aa12.67□□□□□ -0.38
PMS1-214ENST00000446877 DLEU1O43261 78 aa12.66□□□□□ -0.38
PMS1-214ENST00000446877 IFITM1P13164 125 aa12.66□□□□□ -0.38
PMS1-214ENST00000446877 Q75L30 129 aa12.63□□□□□ -0.39
PMS1-214ENST00000446877 OBSCN-AS1Q96MR7 158 aa12.63□□□□□ -0.39
PMS1-214ENST00000446877 C14orf144Q96I85 54 aa12.62□□□□□ -0.39
PMS1-214ENST00000446877 MUSTN1Q8IVN3 82 aa12.6□□□□□ -0.39
PMS1-214ENST00000446877 Q6JHZ5 121 aa12.56□□□□□ -0.4
PMS1-214ENST00000446877 TRBV7-7A0A0K0K1E9 115 aa12.55□□□□□ -0.4
PMS1-214ENST00000446877 KRTAP9-8Q9BYQ0 159 aa12.55□□□□□ -0.4
PMS1-214ENST00000446877 HIGD1BQ9P298 99 aa12.55□□□□□ -0.4
PMS1-214ENST00000446877 TRAV13-2A0A0B4J235 113 aa12.54□□□□□ -0.4
PMS1-214ENST00000446877 SMIM11BQ8TCY0 68 aa12.54□□□□□ -0.4
PMS1-214ENST00000446877 CLEC2BQ92478 149 aa12.53□□□□□ -0.4
PMS1-214ENST00000446877 VAMP3Q15836 100 aa12.52□□□□□ -0.41
PMS1-214ENST00000446877 HIST1H4GQ99525 98 aa12.52□□□□□ -0.41
PMS1-214ENST00000446877 Q96NJ1 140 aa12.5□□□□□ -0.41
PMS1-214ENST00000446877 TRBV20-1A0A075B6N2 111 aa12.49□□□□□ -0.41
PMS1-214ENST00000446877 C2orf91Q6ZV80 131 aa12.49□□□□□ -0.41
PMS1-214ENST00000446877 FCGBPQ9Y6R7 5405 aaPredicted RBP12.49□□□□□ -0.41
PMS1-214ENST00000446877 LOC105371267A0A1B0GV96 52 aa12.48□□□□□ -0.41
PMS1-214ENST00000446877 IGFL1Q6UW32 110 aa12.48□□□□□ -0.41
PMS1-214ENST00000446877 SMIM6P0DI80 62 aa12.46□□□□□ -0.41
PMS1-214ENST00000446877 OCIAD2Q56VL3 154 aa12.46□□□□□ -0.41
PMS1-214ENST00000446877 LINC00575Q6W349 94 aa12.45□□□□□ -0.42
PMS1-214ENST00000446877 Q6ZQY7 126 aa12.45□□□□□ -0.42
PMS1-214ENST00000446877 LST1O00453 97 aa12.44□□□□□ -0.42
PMS1-214ENST00000446877 hADV29S1A0JD25 119 aa12.43□□□□□ -0.42
PMS1-214ENST00000446877 UQCR10Q9UDW1 63 aa12.43□□□□□ -0.42
PMS1-214ENST00000446877 CEND1Q8N111 149 aa12.38□□□□□ -0.43
PMS1-214ENST00000446877 C20orf166-AS1Q96NR2 134 aa12.38□□□□□ -0.43
PMS1-214ENST00000446877 SNHG12Q9BXW3 62 aa12.36□□□□□ -0.43
PMS1-214ENST00000446877 HSD52Q0P140 79 aa12.35□□□□□ -0.43
PMS1-214ENST00000446877 A8MUU9 505 aa12.34□□□□□ -0.43
PMS1-214ENST00000446877 C12orf57Q99622 126 aa12.34□□□□□ -0.43
PMS1-214ENST00000446877 TMEM238LA0A1B0GVL6 79 aa12.33□□□□□ -0.44
PMS1-214ENST00000446877 A6NJY4 79 aa12.33□□□□□ -0.44
PMS1-214ENST00000446877 SS18L2Q9UHA2 77 aa12.33□□□□□ -0.44
PMS1-214ENST00000446877 MT2AP02795 61 aa12.32□□□□□ -0.44
PMS1-214ENST00000446877 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.32□□□□□ -0.44
PMS1-214ENST00000446877 PPDPFLQ8WWR9 84 aa12.32□□□□□ -0.44
PMS1-214ENST00000446877 A0A0B4J2C4 111 aa12.31□□□□□ -0.44
PMS1-214ENST00000446877 KRTAP19-1Q8IUB9 90 aa12.31□□□□□ -0.44
PMS1-214ENST00000446877 FAM236DA0A1B0GTK5 79 aa12.3□□□□□ -0.44
PMS1-214ENST00000446877 FAM236CP0DP71 79 aa12.3□□□□□ -0.44
PMS1-214ENST00000446877 RAB37Q96AX2 223 aa12.3□□□□□ -0.44
PMS1-214ENST00000446877 H3BUT2 72 aa12.29□□□□□ -0.44
PMS1-214ENST00000446877 FXYD2P54710 66 aa12.29□□□□□ -0.44
PMS1-214ENST00000446877 LCE2BO14633 110 aa12.24□□□□□ -0.45
PMS1-214ENST00000446877 PRO1854Q9UHT4 67 aa12.24□□□□□ -0.45
PMS1-214ENST00000446877 MACF1Q9UPN3 7388 aaKnown RBP12.24□□□□□ -0.45
PMS1-214ENST00000446877 TSTD3H0UI37 97 aa12.23□□□□□ -0.45
PMS1-214ENST00000446877 KRTAP10-10P60014 251 aa12.22□□□□□ -0.45
PMS1-214ENST00000446877 SYNE2Q8WXH0 6885 aaKnown RBP12.22□□□□□ -0.45
PMS1-214ENST00000446877 MT1FP04733 61 aa12.21□□□□□ -0.45
PMS1-214ENST00000446877 BVES-AS1Q5T3Y7 98 aa12.21□□□□□ -0.45
PMS1-214ENST00000446877 TEN1Q86WV5 123 aa12.19□□□□□ -0.46
PMS1-214ENST00000446877 DSCR10P59022 87 aa12.18□□□□□ -0.46
PMS1-214ENST00000446877 KRTAP9-3Q9BYQ3 159 aa12.18□□□□□ -0.46
PMS1-214ENST00000446877 RBM12B-AS1Q9P1G2 102 aa12.17□□□□□ -0.46
PMS1-214ENST00000446877 A0A087WSZ3 146 aa12.15□□□□□ -0.46
PMS1-214ENST00000446877 M0R143 59 aa12.14□□□□□ -0.47
PMS1-214ENST00000446877 H0YGX0 51 aa12.13□□□□□ -0.47
PMS1-214ENST00000446877 LINC00846Q9NV44 126 aa12.13□□□□□ -0.47
PMS1-214ENST00000446877 SNCGO76070 127 aa12.12□□□□□ -0.47
PMS1-214ENST00000446877 KRTAP16-1A8MUX0 517 aa12.11□□□□□ -0.47
PMS1-214ENST00000446877 K7ERJ3 54 aa12.11□□□□□ -0.47
PMS1-214ENST00000446877 NDUFV3P56181 108 aaKnown RBP12.1□□□□□ -0.47
PMS1-214ENST00000446877 SIGMAR1Q99720 223 aa12.1□□□□□ -0.47
PMS1-214ENST00000446877 LINC00313P59037 77 aa12.09□□□□□ -0.47
PMS1-214ENST00000446877 TRIAP1O43715 76 aa12.06□□□□□ -0.48
PMS1-214ENST00000446877 MPLKIPQ8TAP9 179 aa12.06□□□□□ -0.48
PMS1-214ENST00000446877 HRES1P13985 223 aa12.05□□□□□ -0.48
PMS1-214ENST00000446877 PSMB2P49721 201 aa12.05□□□□□ -0.48
PMS1-214ENST00000446877 A0A1B0GX51 115 aa12.03□□□□□ -0.48
PMS1-214ENST00000446877 COX6CP09669 75 aa12.03□□□□□ -0.48
PMS1-214ENST00000446877 H3BMG7 143 aa12.02□□□□□ -0.49
PMS1-214ENST00000446877 FAM218AQ96MZ4 157 aa12.01□□□□□ -0.49
PMS1-214ENST00000446877 IGKV4-1P06312 121 aa11.99□□□□□ -0.49
PMS1-214ENST00000446877 GHRHP01286 108 aa11.98□□□□□ -0.49
PMS1-214ENST00000446877 MTURNQ8N3F0 131 aa11.97□□□□□ -0.49
PMS1-214ENST00000446877 FABP2P12104 132 aa11.96□□□□□ -0.49
PMS1-214ENST00000446877 NOTCH2NLQ7Z3S9 236 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms