RNA–Protein interactions for RNA: ENST00000445369.2

CLDN9-201, Transcript of claudin 9, humanhuman

APPRIS P1 BASIC

Gene CLDN9, Length 2,050 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9-201ENST00000445369 OCR1Q9BZK8 76 aa11.1□□□□□ -0.63
CLDN9-201ENST00000445369 SNURFQ9Y675 71 aa11.1□□□□□ -0.63
CLDN9-201ENST00000445369 A0A0G2JQZ4 141 aa11.1□□□□□ -0.63
CLDN9-201ENST00000445369 DSCR10P59022 87 aa11.09□□□□□ -0.63
CLDN9-201ENST00000445369 LINC00474Q9P2X8 69 aa11.08□□□□□ -0.63
CLDN9-201ENST00000445369 SPRR1BP22528 89 aa11.07□□□□□ -0.64
CLDN9-201ENST00000445369 PANO1I0J062 215 aa11.07□□□□□ -0.64
CLDN9-201ENST00000445369 UBE2AP49459 152 aa11.07□□□□□ -0.64
CLDN9-201ENST00000445369 FAM236DA0A1B0GTK5 79 aa11.06□□□□□ -0.64
CLDN9-201ENST00000445369 FAM236CP0DP71 79 aa11.06□□□□□ -0.64
CLDN9-201ENST00000445369 STARD9Q9P2P6 4700 aa11.06□□□□□ -0.64
CLDN9-201ENST00000445369 OXTP01178 125 aa11.04□□□□□ -0.64
CLDN9-201ENST00000445369 TMEM254Q8TBM7 123 aa11.04□□□□□ -0.64
CLDN9-201ENST00000445369 VPS13DQ5THJ4 4388 aa11.04□□□□□ -0.64
CLDN9-201ENST00000445369 K7EQZ3 153 aa11.04□□□□□ -0.64
CLDN9-201ENST00000445369 NDUFC1O43677 76 aa11.02□□□□□ -0.64
CLDN9-201ENST00000445369 KRTAP13-1Q8IUC0 172 aa11.01□□□□□ -0.65
CLDN9-201ENST00000445369 TENM2Q9NT68 2774 aa11.01□□□□□ -0.65
CLDN9-201ENST00000445369 A0A087WSZ3 146 aa11□□□□□ -0.65
CLDN9-201ENST00000445369 SPACA4Q8TDM5 124 aa11□□□□□ -0.65
CLDN9-201ENST00000445369 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.99□□□□□ -0.65
CLDN9-201ENST00000445369 PRKDCP78527 4128 aaKnown RBP10.98□□□□□ -0.65
CLDN9-201ENST00000445369 A0A087WTM6 91 aa10.98□□□□□ -0.65
CLDN9-201ENST00000445369 A0A0U1RQV1 116 aa10.98□□□□□ -0.65
CLDN9-201ENST00000445369 FAM30AQ9NZY2 134 aa10.96□□□□□ -0.65
CLDN9-201ENST00000445369 LCE6AA0A183 80 aa10.94□□□□□ -0.66
CLDN9-201ENST00000445369 MEGF8Q7Z7M0 2845 aa10.94□□□□□ -0.66
CLDN9-201ENST00000445369 HCG22E2RYF7 251 aa10.94□□□□□ -0.66
CLDN9-201ENST00000445369 DEFB116Q30KQ4 102 aa10.94□□□□□ -0.66
CLDN9-201ENST00000445369 SERP1Q9Y6X1 66 aa10.93□□□□□ -0.66
CLDN9-201ENST00000445369 Q6ZR54 194 aa10.93□□□□□ -0.66
CLDN9-201ENST00000445369 ATP5EP56381 51 aaPredicted RBP10.9□□□□□ -0.66
CLDN9-201ENST00000445369 RTL8CO15255 209 aa10.89□□□□□ -0.67
CLDN9-201ENST00000445369 SVIPQ8NHG7 77 aa10.89□□□□□ -0.67
CLDN9-201ENST00000445369 HECTD4Q9Y4D8 3996 aa10.87□□□□□ -0.67
CLDN9-201ENST00000445369 RPL37AP61513 92 aaKnown RBP10.86□□□□□ -0.67
CLDN9-201ENST00000445369 LINC00472Q9H8W2 130 aa10.86□□□□□ -0.67
CLDN9-201ENST00000445369 DNAH17Q9UFH2 4485 aa10.86□□□□□ -0.67
CLDN9-201ENST00000445369 SRRM2Q9UQ35 2752 aaKnown RBP10.86□□□□□ -0.67
CLDN9-201ENST00000445369 KMT2AQ03164 3969 aa10.86□□□□□ -0.67
CLDN9-201ENST00000445369 LINC00483Q53H64 154 aa10.84□□□□□ -0.67
CLDN9-201ENST00000445369 DNAH2Q9P225 4427 aa10.84□□□□□ -0.67
CLDN9-201ENST00000445369 Q5XG85 94 aa10.83□□□□□ -0.68
CLDN9-201ENST00000445369 WFDC13Q8IUB5 93 aa10.83□□□□□ -0.68
CLDN9-201ENST00000445369 PLAC8Q9NZF1 115 aa10.83□□□□□ -0.68
CLDN9-201ENST00000445369 FBN3Q75N90 2809 aa10.83□□□□□ -0.68
CLDN9-201ENST00000445369 KRTAP29-1A8MX34 341 aaPredicted RBP10.82□□□□□ -0.68
CLDN9-201ENST00000445369 ZCCHC13Q8WW36 166 aaKnown RBP10.82□□□□□ -0.68
CLDN9-201ENST00000445369 IGLV5-52A0A0A0MRZ9 124 aa10.81□□□□□ -0.68
CLDN9-201ENST00000445369 A8MWP4 228 aa10.81□□□□□ -0.68
CLDN9-201ENST00000445369 PRR15Q8IV56 129 aa10.81□□□□□ -0.68
CLDN9-201ENST00000445369 PSORS1C2Q9UIG4 136 aa10.81□□□□□ -0.68
CLDN9-201ENST00000445369 C5orf47Q569G3 176 aa10.81□□□□□ -0.68
CLDN9-201ENST00000445369 IGLV9-49A0A0B4J1Y8 123 aa10.79□□□□□ -0.68
CLDN9-201ENST00000445369 ZNF706Q9Y5V0 76 aaPredicted RBP10.78□□□□□ -0.68
CLDN9-201ENST00000445369 C1orf134Q5TEV5 83 aa10.78□□□□□ -0.68
CLDN9-201ENST00000445369 CASC2Q6XLA1 102 aa10.75□□□□□ -0.69
CLDN9-201ENST00000445369 WWC2-AS2Q96NR7 200 aa10.75□□□□□ -0.69
CLDN9-201ENST00000445369 DNAH8Q96JB1 4490 aa10.75□□□□□ -0.69
CLDN9-201ENST00000445369 ZNF861PO60384 105 aa10.74□□□□□ -0.69
CLDN9-201ENST00000445369 C4orf26Q17RF5 130 aa10.73□□□□□ -0.69
CLDN9-201ENST00000445369 Q96NJ1 140 aa10.73□□□□□ -0.69
CLDN9-201ENST00000445369 SMIM26A0A096LP01 95 aa10.72□□□□□ -0.69
CLDN9-201ENST00000445369 FRAS1Q86XX4 4008 aa10.72□□□□□ -0.69
CLDN9-201ENST00000445369 DNAH6Q9C0G6 4158 aa10.71□□□□□ -0.7
CLDN9-201ENST00000445369 LY6G6CO95867 125 aa10.7□□□□□ -0.7
CLDN9-201ENST00000445369 MMP24-AS1A0A0U1RRL7 71 aa10.7□□□□□ -0.7
CLDN9-201ENST00000445369 MOBPQ13875 183 aa10.69□□□□□ -0.7
CLDN9-201ENST00000445369 FP248Q71RG6 208 aaPredicted RBP10.69□□□□□ -0.7
CLDN9-201ENST00000445369 MP68P56378 58 aa10.68□□□□□ -0.7
CLDN9-201ENST00000445369 HRCT1Q6UXD1 115 aa10.67□□□□□ -0.7
CLDN9-201ENST00000445369 NDUFB1O75438 58 aa10.67□□□□□ -0.7
CLDN9-201ENST00000445369 ANAPC11Q9NYG5 84 aa10.67□□□□□ -0.7
CLDN9-201ENST00000445369 IGLV7-43P04211 117 aa10.64□□□□□ -0.71
CLDN9-201ENST00000445369 FAM229BQ4G0N7 80 aa10.64□□□□□ -0.71
CLDN9-201ENST00000445369 TRAV22A0A0B4J277 110 aa10.63□□□□□ -0.71
CLDN9-201ENST00000445369 H0Y9P7 68 aa10.63□□□□□ -0.71
CLDN9-201ENST00000445369 LINC00208Q96KT6 92 aa10.62□□□□□ -0.71
CLDN9-201ENST00000445369 hDV103S1A0JD37 113 aa10.62□□□□□ -0.71
CLDN9-201ENST00000445369 H3BPC8 53 aa10.62□□□□□ -0.71
CLDN9-201ENST00000445369 ASB16-AS1Q495Z4 193 aa10.62□□□□□ -0.71
CLDN9-201ENST00000445369 DNAH5Q8TE73 4624 aa10.6□□□□□ -0.71
CLDN9-201ENST00000445369 CYP4F30PQ9H0H9 118 aa10.59□□□□□ -0.71
CLDN9-201ENST00000445369 KRTAP10-2P60368 255 aa10.59□□□□□ -0.71
CLDN9-201ENST00000445369 C8orf17Q9NRJ1 99 aa10.58□□□□□ -0.72
CLDN9-201ENST00000445369 TGP01266 2768 aa10.58□□□□□ -0.72
CLDN9-201ENST00000445369 DNAH11Q96DT5 4516 aa10.58□□□□□ -0.72
CLDN9-201ENST00000445369 C1orf64Q8NEQ6 169 aa10.57□□□□□ -0.72
CLDN9-201ENST00000445369 ALMS1Q8TCU4 4167 aa10.57□□□□□ -0.72
CLDN9-201ENST00000445369 A0A1B0GVX0 72 aa10.56□□□□□ -0.72
CLDN9-201ENST00000445369 CIRBP-AS1Q8TBR5 109 aa10.56□□□□□ -0.72
CLDN9-201ENST00000445369 IGHV6-1A0A0B4J1U7 121 aa10.53□□□□□ -0.72
CLDN9-201ENST00000445369 PRR4Q16378 134 aa10.53□□□□□ -0.72
CLDN9-201ENST00000445369 CDK2AP2O75956 126 aa10.51□□□□□ -0.73
CLDN9-201ENST00000445369 TP53AIP1Q9HCN2 124 aa10.51□□□□□ -0.73
CLDN9-201ENST00000445369 SPANXA2-OT1Q8N9U9 137 aa10.51□□□□□ -0.73
CLDN9-201ENST00000445369 Q6ZSA8 131 aa10.49□□□□□ -0.73
CLDN9-201ENST00000445369 CD164Q04900 197 aa10.48□□□□□ -0.73
CLDN9-201ENST00000445369 MPLKIPQ8TAP9 179 aa10.48□□□□□ -0.73
CLDN9-201ENST00000445369 SSBP3-AS1Q7Z2R9 100 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms