RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 ZANQ9Y493 2812 aa14.33□□□□□ -0.12
CTDSPL-206ENST00000443503 PSORS1C2Q9UIG4 136 aa14.33□□□□□ -0.12
CTDSPL-206ENST00000443503 SPTBN5Q9NRC6 3674 aaKnown RBP14.33□□□□□ -0.12
CTDSPL-206ENST00000443503 PRO0628Q9UI54 55 aa14.32□□□□□ -0.12
CTDSPL-206ENST00000443503 STAB2Q8WWQ8 2551 aa14.32□□□□□ -0.12
CTDSPL-206ENST00000443503 IGLV5-48A0A075B6I7 105 aa14.32□□□□□ -0.12
CTDSPL-206ENST00000443503 Q8NDZ9 215 aa14.31□□□□□ -0.12
CTDSPL-206ENST00000443503 TNRC18O15417 2968 aaPredicted RBP14.31□□□□□ -0.12
CTDSPL-206ENST00000443503 C8orf17Q9NRJ1 99 aa14.31□□□□□ -0.12
CTDSPL-206ENST00000443503 IGLV5-37A0A075B6J1 123 aa14.3□□□□□ -0.12
CTDSPL-206ENST00000443503 FAM229AH3BQW9 127 aa14.29□□□□□ -0.12
CTDSPL-206ENST00000443503 H7BZZ5 65 aa14.29□□□□□ -0.12
CTDSPL-206ENST00000443503 SSBP3-AS1Q7Z2R9 100 aa14.28□□□□□ -0.12
CTDSPL-206ENST00000443503 Q96NJ1 140 aa14.28□□□□□ -0.12
CTDSPL-206ENST00000443503 A0A1B0GU69 56 aa14.28□□□□□ -0.12
CTDSPL-206ENST00000443503 LOC101927531A0A1B0GV80 90 aa14.28□□□□□ -0.12
CTDSPL-206ENST00000443503 C8orf87E5RJ46 101 aa14.27□□□□□ -0.13
CTDSPL-206ENST00000443503 SPRR4Q96PI1 79 aa14.25□□□□□ -0.13
CTDSPL-206ENST00000443503 LOC400499M0QZD8 3231 aa14.25□□□□□ -0.13
CTDSPL-206ENST00000443503 A0A1B0GVX0 72 aa14.24□□□□□ -0.13
CTDSPL-206ENST00000443503 DSCR10P59022 87 aa14.22□□□□□ -0.13
CTDSPL-206ENST00000443503 IGLV7-43P04211 117 aa14.21□□□□□ -0.13
CTDSPL-206ENST00000443503 CELSR2Q9HCU4 2923 aa14.21□□□□□ -0.14
CTDSPL-206ENST00000443503 SMR3BP02814 79 aaPredicted RBP14.17□□□□□ -0.14
CTDSPL-206ENST00000443503 COA5Q86WW8 74 aa14.16□□□□□ -0.14
CTDSPL-206ENST00000443503 HIVEP1P15822 2718 aa14.16□□□□□ -0.14
CTDSPL-206ENST00000443503 A8MUN3 132 aa14.15□□□□□ -0.14
CTDSPL-206ENST00000443503 NIPBLQ6KC79 2804 aaeCLIP14.13□□□□□ -0.15
CTDSPL-206ENST00000443503 APCP25054 2843 aa14.13□□□□□ -0.15
CTDSPL-206ENST00000443503 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.11□□□□□ -0.15
CTDSPL-206ENST00000443503 TNP2Q05952 138 aa14.1□□□□□ -0.15
CTDSPL-206ENST00000443503 LINC00304Q8N9R0 145 aa14.09□□□□□ -0.15
CTDSPL-206ENST00000443503 IGLV8-61A0A075B6I0 122 aa14.09□□□□□ -0.15
CTDSPL-206ENST00000443503 USP34Q70CQ2 3546 aa14.06□□□□□ -0.16
CTDSPL-206ENST00000443503 OCR1Q9BZK8 76 aa14.05□□□□□ -0.16
CTDSPL-206ENST00000443503 MYO15AQ9UKN7 3530 aa14.03□□□□□ -0.16
CTDSPL-206ENST00000443503 KMT2BQ9UMN6 2715 aaPredicted RBP14.02□□□□□ -0.17
CTDSPL-206ENST00000443503 SPRR1AP35321 89 aa14.02□□□□□ -0.17
CTDSPL-206ENST00000443503 ATP11AUNQ6ZP68 121 aa14.01□□□□□ -0.17
CTDSPL-206ENST00000443503 KRTAP26-1Q6PEX3 210 aa14□□□□□ -0.17
CTDSPL-206ENST00000443503 NF1P21359 2839 aa14□□□□□ -0.17
CTDSPL-206ENST00000443503 KRTAP1-5Q9BYS1 174 aa14□□□□□ -0.17
CTDSPL-206ENST00000443503 DCHS2Q6V1P9 2916 aa13.98□□□□□ -0.17
CTDSPL-206ENST00000443503 C9orf92A6NGG3 77 aa13.97□□□□□ -0.17
CTDSPL-206ENST00000443503 LINC00336Q6ZUF6 198 aa13.92□□□□□ -0.18
CTDSPL-206ENST00000443503 HRNRQ86YZ3 2850 aaPredicted RBP13.92□□□□□ -0.18
CTDSPL-206ENST00000443503 CYP4F30PQ9H0H9 118 aa13.89□□□□□ -0.19
CTDSPL-206ENST00000443503 FBN2P35556 2912 aa13.89□□□□□ -0.19
CTDSPL-206ENST00000443503 SPANXA2-OT1Q8N9U9 137 aa13.85□□□□□ -0.19
CTDSPL-206ENST00000443503 CRYBG3Q68DQ2 2970 aa13.84□□□□□ -0.19
CTDSPL-206ENST00000443503 TENM4Q6N022 2769 aa13.83□□□□□ -0.2
CTDSPL-206ENST00000443503 CYSTM1Q9H1C7 97 aa13.81□□□□□ -0.2
CTDSPL-206ENST00000443503 UQCR11O14957 56 aa13.79□□□□□ -0.2
CTDSPL-206ENST00000443503 PLAC8Q9NZF1 115 aa13.79□□□□□ -0.2
CTDSPL-206ENST00000443503 CD164Q04900 197 aa13.75□□□□□ -0.21
CTDSPL-206ENST00000443503 FLG2Q5D862 2391 aaPredicted RBP13.75□□□□□ -0.21
CTDSPL-206ENST00000443503 SPRR1BP22528 89 aa13.74□□□□□ -0.21
CTDSPL-206ENST00000443503 PRR26Q8N8Z3 221 aa13.73□□□□□ -0.21
CTDSPL-206ENST00000443503 MMP24-AS1A0A0U1RRL7 71 aa13.72□□□□□ -0.21
CTDSPL-206ENST00000443503 Q8N1X5 172 aa13.72□□□□□ -0.21
CTDSPL-206ENST00000443503 J3QL48 77 aa13.69□□□□□ -0.22
CTDSPL-206ENST00000443503 LINC00472Q9H8W2 130 aa13.68□□□□□ -0.22
CTDSPL-206ENST00000443503 MIR22HGQ0VDD5 57 aa13.65□□□□□ -0.22
CTDSPL-206ENST00000443503 DMBT1Q9UGM3 2413 aaPredicted RBP13.63□□□□□ -0.23
CTDSPL-206ENST00000443503 KRTAP4-16G5E9R7 235 aaPredicted RBP13.62□□□□□ -0.23
CTDSPL-206ENST00000443503 FAM229BQ4G0N7 80 aa13.62□□□□□ -0.23
CTDSPL-206ENST00000443503 IGLV7-46A0A075B6I9 117 aa13.6□□□□□ -0.23
CTDSPL-206ENST00000443503 PANO1I0J062 215 aa13.59□□□□□ -0.23
CTDSPL-206ENST00000443503 MXRA5Q9NR99 2828 aa13.57□□□□□ -0.24
CTDSPL-206ENST00000443503 HRES1P13985 223 aa13.56□□□□□ -0.24
CTDSPL-206ENST00000443503 RELNP78509 3460 aa13.54□□□□□ -0.24
CTDSPL-206ENST00000443503 Q8N9P0 234 aaPredicted RBP13.54□□□□□ -0.24
CTDSPL-206ENST00000443503 Q1T7F1 81 aa13.52□□□□□ -0.25
CTDSPL-206ENST00000443503 WDFY3Q8IZQ1 3526 aa13.52□□□□□ -0.25
CTDSPL-206ENST00000443503 DCHS1Q96JQ0 3298 aa13.5□□□□□ -0.25
CTDSPL-206ENST00000443503 KRTAP10-2P60368 255 aa13.49□□□□□ -0.25
CTDSPL-206ENST00000443503 COX6B2Q6YFQ2 88 aa13.46□□□□□ -0.25
CTDSPL-206ENST00000443503 FP248Q71RG6 208 aaPredicted RBP13.46□□□□□ -0.25
CTDSPL-206ENST00000443503 KRTAP10-1P60331 282 aa13.45□□□□□ -0.26
CTDSPL-206ENST00000443503 Q5XG85 94 aa13.42□□□□□ -0.26
CTDSPL-206ENST00000443503 CDC42SE1Q9NRR8 79 aa13.41□□□□□ -0.26
CTDSPL-206ENST00000443503 Q6ZR54 194 aa13.39□□□□□ -0.27
CTDSPL-206ENST00000443503 MUC3AQ02505 3323 aa13.37□□□□□ -0.27
CTDSPL-206ENST00000443503 Q5W150 140 aa13.36□□□□□ -0.27
CTDSPL-206ENST00000443503 KRTAP11-1Q8IUC1 163 aa13.35□□□□□ -0.27
CTDSPL-206ENST00000443503 RBM12B-AS1Q9P1G2 102 aa13.35□□□□□ -0.27
CTDSPL-206ENST00000443503 ZCCHC13Q8WW36 166 aaKnown RBP13.35□□□□□ -0.27
CTDSPL-206ENST00000443503 KRTAP7-1Q8IUC3 87 aa13.34□□□□□ -0.27
CTDSPL-206ENST00000443503 OXTP01178 125 aa13.34□□□□□ -0.27
CTDSPL-206ENST00000443503 LINC00483Q53H64 154 aa13.34□□□□□ -0.27
CTDSPL-206ENST00000443503 LAMA5O15230 3695 aa13.32□□□□□ -0.28
CTDSPL-206ENST00000443503 A0A0D9SG42 100 aa13.31□□□□□ -0.28
CTDSPL-206ENST00000443503 KTN1-AS1Q86SY8 53 aa13.3□□□□□ -0.28
CTDSPL-206ENST00000443503 ASPMQ8IZT6 3477 aa13.3□□□□□ -0.28
CTDSPL-206ENST00000443503 Q6ZRN7 208 aaPredicted RBP13.26□□□□□ -0.29
CTDSPL-206ENST00000443503 LINC01558Q9Y6Z2 57 aa13.26□□□□□ -0.29
CTDSPL-206ENST00000443503 KRTAP29-1A8MX34 341 aaPredicted RBP13.26□□□□□ -0.29
CTDSPL-206ENST00000443503 Q75L30 129 aa13.25□□□□□ -0.29
CTDSPL-206ENST00000443503 LINC01554Q52M75 96 aa13.23□□□□□ -0.29
CTDSPL-206ENST00000443503 Q6ZSA8 131 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms