RNA–Protein interactions for RNA: ENST00000442971.1

SSXP3-201, Transcript of SSX family pseudogene 3, humanhuman

BASIC

Gene SSXP3, Length 1,300 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSXP3-201ENST00000442971 LEPROTO15243 131 aa3.53□□□□□ -1.84
SSXP3-201ENST00000442971 SPINK8P0C7L1 97 aa3.53□□□□□ -1.84
SSXP3-201ENST00000442971 SCGB1C2P0DMR2 95 aa3.53□□□□□ -1.84
SSXP3-201ENST00000442971 PSMB2P49721 201 aa3.53□□□□□ -1.84
SSXP3-201ENST00000442971 ATXN8Q156A1 80 aa3.53□□□□□ -1.84
SSXP3-201ENST00000442971 ARL17AQ8IVW1 177 aa3.53□□□□□ -1.84
SSXP3-201ENST00000442971 TMEM243Q9BU79 118 aa3.53□□□□□ -1.84
SSXP3-201ENST00000442971 IGLV9-49A0A0B4J1Y8 123 aa3.52□□□□□ -1.85
SSXP3-201ENST00000442971 RPS29P62273 56 aaKnown RBP3.52□□□□□ -1.85
SSXP3-201ENST00000442971 Q6ZUT4 128 aa3.52□□□□□ -1.85
SSXP3-201ENST00000442971 COPS9Q8WXC6 57 aa3.52□□□□□ -1.85
SSXP3-201ENST00000442971 RPL39LQ96EH5 51 aaKnown RBP3.52□□□□□ -1.85
SSXP3-201ENST00000442971 C2orf48Q96LS8 159 aa3.52□□□□□ -1.85
SSXP3-201ENST00000442971 GEMIN7Q9H840 131 aaKnown RBP3.52□□□□□ -1.85
SSXP3-201ENST00000442971 ERG28Q9UKR5 140 aa3.52□□□□□ -1.85
SSXP3-201ENST00000442971 TRBV30A0A0K0K1B3 111 aa3.51□□□□□ -1.85
SSXP3-201ENST00000442971 TMEM223A0PJW6 202 aa3.51□□□□□ -1.85
SSXP3-201ENST00000442971 H3BT86 120 aa3.51□□□□□ -1.85
SSXP3-201ENST00000442971 TIMM17BO60830 172 aa3.51□□□□□ -1.85
SSXP3-201ENST00000442971 IGKV2-30P06310 120 aa3.51□□□□□ -1.85
SSXP3-201ENST00000442971 COX6CP09669 75 aa3.51□□□□□ -1.85
SSXP3-201ENST00000442971 TMEM170BQ5T4T1 132 aa3.51□□□□□ -1.85
SSXP3-201ENST00000442971 CD164L2Q6UWJ8 174 aa3.51□□□□□ -1.85
SSXP3-201ENST00000442971 KRTAP13-1Q8IUC0 172 aa3.51□□□□□ -1.85
SSXP3-201ENST00000442971 PYGO1Q9Y3Y4 419 aa3.51□□□□□ -1.85
SSXP3-201ENST00000442971 A0A0J9YXY3 114 aa3.5□□□□□ -1.85
SSXP3-201ENST00000442971 FAM240AA0A1B0GVK7 77 aa3.5□□□□□ -1.85
SSXP3-201ENST00000442971 I3L3M4 83 aa3.5□□□□□ -1.85
SSXP3-201ENST00000442971 TCL1BO95988 128 aa3.5□□□□□ -1.85
SSXP3-201ENST00000442971 IFITM1P13164 125 aa3.5□□□□□ -1.85
SSXP3-201ENST00000442971 UBE2AP49459 152 aa3.5□□□□□ -1.85
SSXP3-201ENST00000442971 ANKRD29Q8N6D5 301 aa3.5□□□□□ -1.85
SSXP3-201ENST00000442971 AMELXQ99217 191 aa3.5□□□□□ -1.85
SSXP3-201ENST00000442971 SPANXCQ9NY87 97 aa3.5□□□□□ -1.85
SSXP3-201ENST00000442971 TRBV10-2A0A0K0K1G8 114 aa3.49□□□□□ -1.85
SSXP3-201ENST00000442971 M0QY20 66 aa3.49□□□□□ -1.85
SSXP3-201ENST00000442971 UBE2L6O14933 153 aa3.49□□□□□ -1.85
SSXP3-201ENST00000442971 SNCGO76070 127 aa3.49□□□□□ -1.85
SSXP3-201ENST00000442971 TLX1NBP0CAT3 122 aa3.49□□□□□ -1.85
SSXP3-201ENST00000442971 ZNF22P17026 224 aaPredicted RBP3.49□□□□□ -1.85
SSXP3-201ENST00000442971 ZNF56Q15929 161 aa3.49□□□□□ -1.85
SSXP3-201ENST00000442971 ANAPC13Q9BS18 74 aa3.49□□□□□ -1.85
SSXP3-201ENST00000442971 C9JAW5 83 aa3.48□□□□□ -1.85
SSXP3-201ENST00000442971 IGLV6-57P01721 117 aa3.48□□□□□ -1.85
SSXP3-201ENST00000442971 MT-ATP8P03928 68 aa3.48□□□□□ -1.85
SSXP3-201ENST00000442971 ACYP1P07311 99 aa3.48□□□□□ -1.85
SSXP3-201ENST00000442971 TSPEAR-AS2P59090 65 aa3.48□□□□□ -1.85
SSXP3-201ENST00000442971 RPL39P62891 51 aaKnown RBP3.48□□□□□ -1.85
SSXP3-201ENST00000442971 MRPS36P82909 103 aaKnown RBP3.48□□□□□ -1.85
SSXP3-201ENST00000442971 Q1RN00 199 aa3.48□□□□□ -1.85
SSXP3-201ENST00000442971 TIMM21Q9BVV7 248 aa3.48□□□□□ -1.85
SSXP3-201ENST00000442971 C22orf24Q9Y442 160 aa3.48□□□□□ -1.85
SSXP3-201ENST00000442971 IGLV4-3A0A075B6K6 122 aa3.47□□□□□ -1.85
SSXP3-201ENST00000442971 TINCRA0A1B0GVN0 87 aa3.47□□□□□ -1.85
SSXP3-201ENST00000442971 AHNAKQ09666 5890 aaKnown RBP3.46□□□□□ -1.85
SSXP3-201ENST00000442971 KRTAP10-5P60370 271 aa3.46□□□□□ -1.85
SSXP3-201ENST00000442971 C9orf129Q5T035 196 aaKnown RBP3.46□□□□□ -1.85
SSXP3-201ENST00000442971 C2orf82Q6UX34 121 aa3.46□□□□□ -1.85
SSXP3-201ENST00000442971 MUSTN1Q8IVN3 82 aa3.46□□□□□ -1.85
SSXP3-201ENST00000442971 IMUPQ9GZP8 106 aa3.46□□□□□ -1.85
SSXP3-201ENST00000442971 LST1O00453 97 aa3.45□□□□□ -1.86
SSXP3-201ENST00000442971 NDUFA1O15239 70 aa3.45□□□□□ -1.86
SSXP3-201ENST00000442971 NDUFV3P56181 108 aaKnown RBP3.45□□□□□ -1.86
SSXP3-201ENST00000442971 TMEM101Q96IK0 257 aa3.45□□□□□ -1.86
SSXP3-201ENST00000442971 TRBV7-7A0A0K0K1E9 115 aa3.44□□□□□ -1.86
SSXP3-201ENST00000442971 A0A0U1RRA0 63 aa3.44□□□□□ -1.86
SSXP3-201ENST00000442971 LINC00959A0A1B0GUT2 108 aa3.44□□□□□ -1.86
SSXP3-201ENST00000442971 HERV-K104P63124 156 aa3.44□□□□□ -1.86
SSXP3-201ENST00000442971 SFTA2Q6UW10 78 aa3.44□□□□□ -1.86
SSXP3-201ENST00000442971 LITAFQ99732 161 aa3.44□□□□□ -1.86
SSXP3-201ENST00000442971 H7C2G1 150 aa3.44□□□□□ -1.86
SSXP3-201ENST00000442971 TRACP01848 142 aa3.44□□□□□ -1.86
SSXP3-201ENST00000442971 HERVK_113P63121 156 aa3.44□□□□□ -1.86
SSXP3-201ENST00000442971 FAM19A3Q7Z5A8 133 aa3.44□□□□□ -1.86
SSXP3-201ENST00000442971 TMEM126AQ9H061 195 aa3.44□□□□□ -1.86
SSXP3-201ENST00000442971 CSDC2Q9Y534 153 aaKnown RBP3.44□□□□□ -1.86
SSXP3-201ENST00000442971 F8WDY8 70 aa3.43□□□□□ -1.86
SSXP3-201ENST00000442971 H7C423 109 aa3.43□□□□□ -1.86
SSXP3-201ENST00000442971 SPAG11BQ08648 103 aa3.43□□□□□ -1.86
SSXP3-201ENST00000442971 TEX49A0A1B0GTD5 131 aa3.42□□□□□ -1.86
SSXP3-201ENST00000442971 RPL37AP8A6NKH3 93 aa3.42□□□□□ -1.86
SSXP3-201ENST00000442971 SMIM1B2RUZ4 78 aa3.42□□□□□ -1.86
SSXP3-201ENST00000442971 COX7A2LO14548 114 aa3.42□□□□□ -1.86
SSXP3-201ENST00000442971 CXCL5P42830 114 aa3.42□□□□□ -1.86
SSXP3-201ENST00000442971 C6orf99Q4VX62 202 aa3.42□□□□□ -1.86
SSXP3-201ENST00000442971 MRPL55Q7Z7F7 128 aaKnown RBP3.42□□□□□ -1.86
SSXP3-201ENST00000442971 LINC00643Q86TS7 51 aa3.42□□□□□ -1.86
SSXP3-201ENST00000442971 C6orf48Q9UBA6 75 aa3.42□□□□□ -1.86
SSXP3-201ENST00000442971 TRAV13-2A0A0B4J235 113 aa3.41□□□□□ -1.86
SSXP3-201ENST00000442971 LINC00308Q8TCZ7 52 aa3.41□□□□□ -1.86
SSXP3-201ENST00000442971 PRLHP81277 87 aa3.4□□□□□ -1.87
SSXP3-201ENST00000442971 ADAMTSL4-AS1Q5T5F5 129 aa3.4□□□□□ -1.87
SSXP3-201ENST00000442971 UNQ6190/PRO20217Q6UXQ8 127 aa3.4□□□□□ -1.87
SSXP3-201ENST00000442971 Q6ZVQ6 151 aa3.4□□□□□ -1.87
SSXP3-201ENST00000442971 FAM104AQ969W3 186 aa3.4□□□□□ -1.87
SSXP3-201ENST00000442971 H0YGX0 51 aa3.39□□□□□ -1.87
SSXP3-201ENST00000442971 CLEC2BQ92478 149 aa3.39□□□□□ -1.87
SSXP3-201ENST00000442971 CDKN2A-AS1Q9UH64 79 aa3.39□□□□□ -1.87
SSXP3-201ENST00000442971 SS18L2Q9UHA2 77 aa3.39□□□□□ -1.87
SSXP3-201ENST00000442971 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms