RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 C7orf33Q8WU49 177 aa10.79□□□□□ -0.68
PMS1-213ENST00000441310 LIMD2Q9BT23 127 aa10.79□□□□□ -0.68
PMS1-213ENST00000441310 SERTAD4-AS1Q5TG53 156 aa10.79□□□□□ -0.68
PMS1-213ENST00000441310 CMYA5Q8N3K9 4069 aa10.78□□□□□ -0.68
PMS1-213ENST00000441310 A0A1B0GW54 56 aa10.77□□□□□ -0.68
PMS1-213ENST00000441310 KCNQ1DNQ9H478 68 aa10.77□□□□□ -0.68
PMS1-213ENST00000441310 Q9BRP9 147 aa10.77□□□□□ -0.69
PMS1-213ENST00000441310 TNP2Q05952 138 aa10.77□□□□□ -0.69
PMS1-213ENST00000441310 SPRR4Q96PI1 79 aa10.76□□□□□ -0.69
PMS1-213ENST00000441310 C15orf56Q8N910 161 aa10.75□□□□□ -0.69
PMS1-213ENST00000441310 ATP11AUNQ6ZP68 121 aa10.74□□□□□ -0.69
PMS1-213ENST00000441310 Q6ZRX8 168 aa10.74□□□□□ -0.69
PMS1-213ENST00000441310 DHRS4-AS1Q9P1J3 65 aa10.74□□□□□ -0.69
PMS1-213ENST00000441310 RPL37AP61513 92 aaKnown RBP10.73□□□□□ -0.69
PMS1-213ENST00000441310 H0Y9P7 68 aa10.72□□□□□ -0.69
PMS1-213ENST00000441310 IGKV2D-24A0A075B6R9 120 aa10.71□□□□□ -0.69
PMS1-213ENST00000441310 A6NN06 94 aa10.7□□□□□ -0.7
PMS1-213ENST00000441310 K7EIL1 84 aa10.69□□□□□ -0.7
PMS1-213ENST00000441310 NDUFS5O43920 106 aa10.69□□□□□ -0.7
PMS1-213ENST00000441310 TENM2Q9NT68 2774 aa10.69□□□□□ -0.7
PMS1-213ENST00000441310 Q75L30 129 aa10.68□□□□□ -0.7
PMS1-213ENST00000441310 FAM168BA1KXE4 195 aa10.67□□□□□ -0.7
PMS1-213ENST00000441310 H3BNG1 76 aa10.67□□□□□ -0.7
PMS1-213ENST00000441310 KRTAP26-1Q6PEX3 210 aa10.67□□□□□ -0.7
PMS1-213ENST00000441310 LINC00476Q8WZB0 136 aa10.67□□□□□ -0.7
PMS1-213ENST00000441310 SPANXA2-OT1Q8N9U9 137 aa10.67□□□□□ -0.7
PMS1-213ENST00000441310 A0A087WSZ3 146 aa10.65□□□□□ -0.7
PMS1-213ENST00000441310 COA5Q86WW8 74 aa10.65□□□□□ -0.7
PMS1-213ENST00000441310 COL7A1Q02388 2944 aa10.65□□□□□ -0.71
PMS1-213ENST00000441310 PHF5AQ7RTV0 110 aaKnown RBP10.64□□□□□ -0.71
PMS1-213ENST00000441310 KRTAP4-16G5E9R7 235 aaPredicted RBP10.63□□□□□ -0.71
PMS1-213ENST00000441310 CASC2Q6XLA1 102 aa10.62□□□□□ -0.71
PMS1-213ENST00000441310 IGFL1Q6UW32 110 aa10.61□□□□□ -0.71
PMS1-213ENST00000441310 CDC42SE1Q9NRR8 79 aa10.61□□□□□ -0.71
PMS1-213ENST00000441310 LOC101927531A0A1B0GV80 90 aa10.61□□□□□ -0.71
PMS1-213ENST00000441310 IGLV1-50A0A075B6I6 118 aa10.6□□□□□ -0.71
PMS1-213ENST00000441310 LINC01556Q5JQF7 62 aa10.6□□□□□ -0.71
PMS1-213ENST00000441310 C7orf65Q6ZTY9 151 aa10.6□□□□□ -0.71
PMS1-213ENST00000441310 MDFIQ99750 246 aa10.6□□□□□ -0.71
PMS1-213ENST00000441310 KRTAP29-1A8MX34 341 aaPredicted RBP10.6□□□□□ -0.71
PMS1-213ENST00000441310 CASC10Q5T4H9 136 aa10.6□□□□□ -0.71
PMS1-213ENST00000441310 DNAH3Q8TD57 4116 aa10.59□□□□□ -0.71
PMS1-213ENST00000441310 SPAG11AQ6PDA7 123 aa10.59□□□□□ -0.71
PMS1-213ENST00000441310 MOBPQ13875 183 aa10.59□□□□□ -0.71
PMS1-213ENST00000441310 C9orf163Q8N9P6 203 aa10.58□□□□□ -0.72
PMS1-213ENST00000441310 PCOTHQ58A44 107 aa10.57□□□□□ -0.72
PMS1-213ENST00000441310 HUWE1Q7Z6Z7 4374 aaKnown RBP10.56□□□□□ -0.72
PMS1-213ENST00000441310 SPRR1AP35321 89 aa10.56□□□□□ -0.72
PMS1-213ENST00000441310 H3BPC8 53 aa10.55□□□□□ -0.72
PMS1-213ENST00000441310 CNBPP62633 177 aaKnown RBP10.54□□□□□ -0.72
PMS1-213ENST00000441310 DNAH10OSP0CZ25 163 aa10.53□□□□□ -0.72
PMS1-213ENST00000441310 SPINK7P58062 85 aa10.52□□□□□ -0.73
PMS1-213ENST00000441310 KRTAP7-1Q8IUC3 87 aa10.52□□□□□ -0.73
PMS1-213ENST00000441310 IGLV7-46A0A075B6I9 117 aa10.49□□□□□ -0.73
PMS1-213ENST00000441310 C4orf48Q5BLP8 95 aa10.49□□□□□ -0.73
PMS1-213ENST00000441310 LYSTQ99698 3801 aa10.49□□□□□ -0.73
PMS1-213ENST00000441310 PRLHP81277 87 aa10.48□□□□□ -0.73
PMS1-213ENST00000441310 C8orf87E5RJ46 101 aa10.47□□□□□ -0.73
PMS1-213ENST00000441310 LINC01558Q9Y6Z2 57 aa10.47□□□□□ -0.73
PMS1-213ENST00000441310 REG3GQ6UW15 175 aa10.46□□□□□ -0.73
PMS1-213ENST00000441310 PLA2G2DQ9UNK4 145 aa10.46□□□□□ -0.73
PMS1-213ENST00000441310 H0Y9J4 135 aa10.46□□□□□ -0.74
PMS1-213ENST00000441310 CSMD3Q7Z407 3707 aa10.45□□□□□ -0.74
PMS1-213ENST00000441310 PRAC1Q96KF2 57 aa10.45□□□□□ -0.74
PMS1-213ENST00000441310 A8MWP4 228 aa10.43□□□□□ -0.74
PMS1-213ENST00000441310 IGLV5-37A0A075B6J1 123 aa10.43□□□□□ -0.74
PMS1-213ENST00000441310 TLX1NBP0CAT3 122 aa10.43□□□□□ -0.74
PMS1-213ENST00000441310 KRTAP1-5Q9BYS1 174 aa10.43□□□□□ -0.74
PMS1-213ENST00000441310 A0A096LNI7 61 aa10.4□□□□□ -0.74
PMS1-213ENST00000441310 UBE2DNLQ8IWF7 75 aa10.4□□□□□ -0.74
PMS1-213ENST00000441310 PLAC8Q9NZF1 115 aa10.4□□□□□ -0.74
PMS1-213ENST00000441310 LINC00313P59037 77 aa10.39□□□□□ -0.75
PMS1-213ENST00000441310 SRRM2Q9UQ35 2752 aaKnown RBP10.37□□□□□ -0.75
PMS1-213ENST00000441310 MMP24-AS1A0A0U1RRL7 71 aa10.37□□□□□ -0.75
PMS1-213ENST00000441310 LINC00472Q9H8W2 130 aa10.37□□□□□ -0.75
PMS1-213ENST00000441310 DNAH10Q8IVF4 4471 aa10.36□□□□□ -0.75
PMS1-213ENST00000441310 IGLV8-61A0A075B6I0 122 aa10.35□□□□□ -0.75
PMS1-213ENST00000441310 ADM2Q7Z4H4 148 aa10.35□□□□□ -0.75
PMS1-213ENST00000441310 DNAH9Q9NYC9 4486 aa10.35□□□□□ -0.75
PMS1-213ENST00000441310 HRES1P13985 223 aa10.35□□□□□ -0.75
PMS1-213ENST00000441310 IGKV2-24A0A0C4DH68 120 aa10.34□□□□□ -0.75
PMS1-213ENST00000441310 APLNQ9ULZ1 77 aa10.31□□□□□ -0.76
PMS1-213ENST00000441310 PRR26Q8N8Z3 221 aa10.29□□□□□ -0.76
PMS1-213ENST00000441310 DNAH7Q8WXX0 4024 aa10.28□□□□□ -0.76
PMS1-213ENST00000441310 H3BS24 57 aa10.26□□□□□ -0.77
PMS1-213ENST00000441310 TGP01266 2768 aa10.26□□□□□ -0.77
PMS1-213ENST00000441310 MEGF8Q7Z7M0 2845 aa10.25□□□□□ -0.77
PMS1-213ENST00000441310 DNAH1Q9P2D7 4330 aa10.24□□□□□ -0.77
PMS1-213ENST00000441310 CHTF8P0CG12 524 aa10.24□□□□□ -0.77
PMS1-213ENST00000441310 TP53AIP1Q9HCN2 124 aa10.22□□□□□ -0.77
PMS1-213ENST00000441310 PRKDCP78527 4128 aaKnown RBP10.22□□□□□ -0.77
PMS1-213ENST00000441310 LINC01554Q52M75 96 aa10.22□□□□□ -0.77
PMS1-213ENST00000441310 PLECQ15149 4684 aaKnown RBP10.21□□□□□ -0.78
PMS1-213ENST00000441310 Q6ZR54 194 aa10.19□□□□□ -0.78
PMS1-213ENST00000441310 IGHV6-1A0A0B4J1U7 121 aa10.18□□□□□ -0.78
PMS1-213ENST00000441310 KRTAP11-1Q8IUC1 163 aa10.18□□□□□ -0.78
PMS1-213ENST00000441310 C8orf17Q9NRJ1 99 aa10.18□□□□□ -0.78
PMS1-213ENST00000441310 DNHD1Q96M86 4753 aa10.17□□□□□ -0.78
PMS1-213ENST00000441310 NBDYA0A0U1RRE5 68 aa10.15□□□□□ -0.78
PMS1-213ENST00000441310 PLA2G1BP04054 148 aaKnown RBP10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms