RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 ATOX1O00244 68 aa7.24□□□□□ -1.25
SMAD3-202ENST00000439724 NREPQ16612 68 aa7.24□□□□□ -1.25
SMAD3-202ENST00000439724 IGFL1Q6UW32 110 aa7.23□□□□□ -1.25
SMAD3-202ENST00000439724 CRYGAP11844 174 aa7.22□□□□□ -1.25
SMAD3-202ENST00000439724 PSORS1C2Q9UIG4 136 aa7.22□□□□□ -1.25
SMAD3-202ENST00000439724 KRTAP10-2P60368 255 aa7.21□□□□□ -1.26
SMAD3-202ENST00000439724 DNAH17Q9UFH2 4485 aa7.2□□□□□ -1.26
SMAD3-202ENST00000439724 SCXQ7RTU7 201 aa7.2□□□□□ -1.26
SMAD3-202ENST00000439724 KMT2AQ03164 3969 aa7.2□□□□□ -1.26
SMAD3-202ENST00000439724 CCDC179H3BU77 68 aa7.19□□□□□ -1.26
SMAD3-202ENST00000439724 BPY2O14599 106 aa7.18□□□□□ -1.26
SMAD3-202ENST00000439724 LINC00483Q53H64 154 aa7.18□□□□□ -1.26
SMAD3-202ENST00000439724 ZNF706Q9Y5V0 76 aaPredicted RBP7.18□□□□□ -1.26
SMAD3-202ENST00000439724 A0A0G2JQZ4 141 aa7.17□□□□□ -1.26
SMAD3-202ENST00000439724 ZNF861PO60384 105 aa7.17□□□□□ -1.26
SMAD3-202ENST00000439724 COX7CP15954 63 aa7.17□□□□□ -1.26
SMAD3-202ENST00000439724 TGP01266 2768 aa7.16□□□□□ -1.26
SMAD3-202ENST00000439724 DNAH2Q9P225 4427 aa7.16□□□□□ -1.26
SMAD3-202ENST00000439724 UQCRQO14949 82 aa7.16□□□□□ -1.26
SMAD3-202ENST00000439724 IGKV4-1P06312 121 aa7.16□□□□□ -1.26
SMAD3-202ENST00000439724 Q6ZSA8 131 aa7.16□□□□□ -1.26
SMAD3-202ENST00000439724 SERP2Q8N6R1 65 aa7.16□□□□□ -1.26
SMAD3-202ENST00000439724 FAM30AQ9NZY2 134 aa7.15□□□□□ -1.27
SMAD3-202ENST00000439724 CIRBP-AS1Q8TBR5 109 aa7.14□□□□□ -1.27
SMAD3-202ENST00000439724 IGLV7-43P04211 117 aa7.13□□□□□ -1.27
SMAD3-202ENST00000439724 RPL37AP61513 92 aaKnown RBP7.13□□□□□ -1.27
SMAD3-202ENST00000439724 HECTD4Q9Y4D8 3996 aa7.13□□□□□ -1.27
SMAD3-202ENST00000439724 A0A087WSZ3 146 aa7.12□□□□□ -1.27
SMAD3-202ENST00000439724 KRTAP10-1P60331 282 aa7.12□□□□□ -1.27
SMAD3-202ENST00000439724 Q8N9L7 120 aa7.11□□□□□ -1.27
SMAD3-202ENST00000439724 DSCR10P59022 87 aa7.11□□□□□ -1.27
SMAD3-202ENST00000439724 SMIM20Q8N5G0 67 aa7.11□□□□□ -1.27
SMAD3-202ENST00000439724 C9orf153Q5TBE3 101 aa7.1□□□□□ -1.27
SMAD3-202ENST00000439724 LCE6AA0A183 80 aa7.09□□□□□ -1.27
SMAD3-202ENST00000439724 TRAV7A0A075B6U4 112 aa7.08□□□□□ -1.28
SMAD3-202ENST00000439724 IGLV9-49A0A0B4J1Y8 123 aa7.08□□□□□ -1.28
SMAD3-202ENST00000439724 FRAS1Q86XX4 4008 aa7.07□□□□□ -1.28
SMAD3-202ENST00000439724 K7EQZ3 153 aa7.06□□□□□ -1.28
SMAD3-202ENST00000439724 LINC00336Q6ZUF6 198 aa7.06□□□□□ -1.28
SMAD3-202ENST00000439724 MOBPQ13875 183 aa7.05□□□□□ -1.28
SMAD3-202ENST00000439724 LINC00472Q9H8W2 130 aa7.04□□□□□ -1.28
SMAD3-202ENST00000439724 ANAPC11Q9NYG5 84 aa7.03□□□□□ -1.28
SMAD3-202ENST00000439724 DEFB116Q30KQ4 102 aa7.01□□□□□ -1.29
SMAD3-202ENST00000439724 DNAH11Q96DT5 4516 aa7.01□□□□□ -1.29
SMAD3-202ENST00000439724 J3KT08 172 aa7.01□□□□□ -1.29
SMAD3-202ENST00000439724 OCR1Q9BZK8 76 aa7.01□□□□□ -1.29
SMAD3-202ENST00000439724 SS18L2Q9UHA2 77 aa7.01□□□□□ -1.29
SMAD3-202ENST00000439724 SRRM2Q9UQ35 2752 aaKnown RBP7□□□□□ -1.29
SMAD3-202ENST00000439724 A8MWP4 228 aa7□□□□□ -1.29
SMAD3-202ENST00000439724 HCG22E2RYF7 251 aa7□□□□□ -1.29
SMAD3-202ENST00000439724 DNAH8Q96JB1 4490 aa6.99□□□□□ -1.29
SMAD3-202ENST00000439724 PRR15Q8IV56 129 aa6.98□□□□□ -1.29
SMAD3-202ENST00000439724 Q96NJ1 140 aa6.98□□□□□ -1.29
SMAD3-202ENST00000439724 CYSTM1Q9H1C7 97 aa6.98□□□□□ -1.29
SMAD3-202ENST00000439724 FAT2Q9NYQ8 4349 aa6.98□□□□□ -1.29
SMAD3-202ENST00000439724 A0A1B0GVY2 172 aa6.97□□□□□ -1.29
SMAD3-202ENST00000439724 SSBP3-AS1Q7Z2R9 100 aa6.97□□□□□ -1.29
SMAD3-202ENST00000439724 C20orf197Q8N268 126 aa6.97□□□□□ -1.29
SMAD3-202ENST00000439724 DNAH5Q8TE73 4624 aa6.97□□□□□ -1.29
SMAD3-202ENST00000439724 PKD1P98161 4303 aa6.97□□□□□ -1.29
SMAD3-202ENST00000439724 CD164Q04900 197 aa6.96□□□□□ -1.29
SMAD3-202ENST00000439724 FAM229BQ4G0N7 80 aa6.96□□□□□ -1.29
SMAD3-202ENST00000439724 HRCT1Q6UXD1 115 aa6.96□□□□□ -1.29
SMAD3-202ENST00000439724 HYDINQ4G0P3 5121 aa6.96□□□□□ -1.3
SMAD3-202ENST00000439724 KLKP1Q107X0 134 aa6.96□□□□□ -1.3
SMAD3-202ENST00000439724 KRTAP29-1A8MX34 341 aaPredicted RBP6.94□□□□□ -1.3
SMAD3-202ENST00000439724 TMEM258P61165 79 aa6.93□□□□□ -1.3
SMAD3-202ENST00000439724 NDUFB1O75438 58 aa6.92□□□□□ -1.3
SMAD3-202ENST00000439724 WFDC13Q8IUB5 93 aa6.92□□□□□ -1.3
SMAD3-202ENST00000439724 A0A087X002 238 aa6.91□□□□□ -1.3
SMAD3-202ENST00000439724 KRTAP1-4P0C5Y4 121 aa6.91□□□□□ -1.3
SMAD3-202ENST00000439724 TMEM254Q8TBM7 123 aa6.91□□□□□ -1.3
SMAD3-202ENST00000439724 KRTAP13-2Q52LG2 175 aa6.91□□□□□ -1.3
SMAD3-202ENST00000439724 CASC2Q6XLA1 102 aa6.91□□□□□ -1.3
SMAD3-202ENST00000439724 SNURFQ9Y675 71 aa6.9□□□□□ -1.31
SMAD3-202ENST00000439724 A0A0U1RQV1 116 aa6.89□□□□□ -1.31
SMAD3-202ENST00000439724 MMP24-AS1A0A0U1RRL7 71 aa6.89□□□□□ -1.31
SMAD3-202ENST00000439724 H7BZZ5 65 aa6.89□□□□□ -1.31
SMAD3-202ENST00000439724 ASB16-AS1Q495Z4 193 aa6.89□□□□□ -1.31
SMAD3-202ENST00000439724 SACSQ9NZJ4 4579 aa6.88□□□□□ -1.31
SMAD3-202ENST00000439724 NDUFC1O43677 76 aa6.88□□□□□ -1.31
SMAD3-202ENST00000439724 A0A1B0GVX0 72 aa6.87□□□□□ -1.31
SMAD3-202ENST00000439724 SPINK6Q6UWN8 80 aa6.87□□□□□ -1.31
SMAD3-202ENST00000439724 CDK2AP2O75956 126 aa6.86□□□□□ -1.31
SMAD3-202ENST00000439724 C5orf47Q569G3 176 aa6.86□□□□□ -1.31
SMAD3-202ENST00000439724 Q5XG85 94 aa6.86□□□□□ -1.31
SMAD3-202ENST00000439724 C8orf17Q9NRJ1 99 aa6.86□□□□□ -1.31
SMAD3-202ENST00000439724 hDV103S1A0JD37 113 aa6.84□□□□□ -1.31
SMAD3-202ENST00000439724 IGHV6-1A0A0B4J1U7 121 aa6.82□□□□□ -1.32
SMAD3-202ENST00000439724 PLA2G1BP04054 148 aaKnown RBP6.82□□□□□ -1.32
SMAD3-202ENST00000439724 ZCCHC13Q8WW36 166 aaKnown RBP6.82□□□□□ -1.32
SMAD3-202ENST00000439724 FAM236DA0A1B0GTK5 79 aa6.81□□□□□ -1.32
SMAD3-202ENST00000439724 FAM236CP0DP71 79 aa6.81□□□□□ -1.32
SMAD3-202ENST00000439724 LRP1BQ9NZR2 4599 aa6.81□□□□□ -1.32
SMAD3-202ENST00000439724 SMR3BP02814 79 aaPredicted RBP6.81□□□□□ -1.32
SMAD3-202ENST00000439724 KRTAP10-4P60372 401 aaPredicted RBP6.8□□□□□ -1.32
SMAD3-202ENST00000439724 TYMSOSQ8TAI1 123 aa6.8□□□□□ -1.32
SMAD3-202ENST00000439724 LIMD2Q9BT23 127 aa6.8□□□□□ -1.32
SMAD3-202ENST00000439724 MP68P56378 58 aa6.79□□□□□ -1.32
SMAD3-202ENST00000439724 RPS28P62857 69 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms