RNA–Protein interactions for RNA: ENST00000437111.1

SHQ1P1-201, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor pseudogene 1, humanhuman

BASIC

Gene SHQ1P1, Length 1,544 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1P1-201ENST00000437111 A0A1B0GW54 56 aa4.09□□□□□ -1.75
SHQ1P1-201ENST00000437111 EPM2AB3EWF7 344 aa4.09□□□□□ -1.75
SHQ1P1-201ENST00000437111 Q6ZRX8 168 aa4.09□□□□□ -1.75
SHQ1P1-201ENST00000437111 C7orf33Q8WU49 177 aa4.09□□□□□ -1.75
SHQ1P1-201ENST00000437111 IGKV3D-7A0A0C4DH55 119 aa4.08□□□□□ -1.76
SHQ1P1-201ENST00000437111 TRBV7-4A0A0J9YYF1 115 aa4.08□□□□□ -1.76
SHQ1P1-201ENST00000437111 CXCL6P80162 114 aa4.08□□□□□ -1.76
SHQ1P1-201ENST00000437111 C9orf153Q5TBE3 101 aa4.08□□□□□ -1.76
SHQ1P1-201ENST00000437111 C1orf134Q5TEV5 83 aa4.08□□□□□ -1.76
SHQ1P1-201ENST00000437111 MRPL55Q7Z7F7 128 aaKnown RBP4.08□□□□□ -1.76
SHQ1P1-201ENST00000437111 SMIM20Q8N5G0 67 aa4.08□□□□□ -1.76
SHQ1P1-201ENST00000437111 COX7CP15954 63 aa4.07□□□□□ -1.76
SHQ1P1-201ENST00000437111 FUSP35637 526 aaKnown RBP eCLIP4.07□□□□□ -1.76
SHQ1P1-201ENST00000437111 CNBPP62633 177 aaKnown RBP4.07□□□□□ -1.76
SHQ1P1-201ENST00000437111 C3orf22Q8N5N4 141 aa4.07□□□□□ -1.76
SHQ1P1-201ENST00000437111 FLG2Q5D862 2391 aaPredicted RBP4.07□□□□□ -1.76
SHQ1P1-201ENST00000437111 FAT1Q14517 4588 aa4.07□□□□□ -1.76
SHQ1P1-201ENST00000437111 SRRM2Q9UQ35 2752 aaKnown RBP4.07□□□□□ -1.76
SHQ1P1-201ENST00000437111 IGLV1-50A0A075B6I6 118 aa4.06□□□□□ -1.76
SHQ1P1-201ENST00000437111 B5MCH6 92 aa4.06□□□□□ -1.76
SHQ1P1-201ENST00000437111 F8WEM9 126 aa4.06□□□□□ -1.76
SHQ1P1-201ENST00000437111 BCE1O60756 84 aa4.06□□□□□ -1.76
SHQ1P1-201ENST00000437111 SERTAD4-AS1Q5TG53 156 aa4.06□□□□□ -1.76
SHQ1P1-201ENST00000437111 FAM19A5Q7Z5A7 132 aaPredicted RBP4.06□□□□□ -1.76
SHQ1P1-201ENST00000437111 VPS13BQ7Z7G8 4022 aa4.06□□□□□ -1.76
SHQ1P1-201ENST00000437111 HMCN2Q8NDA2 5059 aa4.06□□□□□ -1.76
SHQ1P1-201ENST00000437111 CCDC179H3BU77 68 aa4.05□□□□□ -1.76
SHQ1P1-201ENST00000437111 SPRR1AP35321 89 aa4.05□□□□□ -1.76
SHQ1P1-201ENST00000437111 HAMPP81172 84 aa4.05□□□□□ -1.76
SHQ1P1-201ENST00000437111 KRTAP19-4Q3LI73 84 aa4.05□□□□□ -1.76
SHQ1P1-201ENST00000437111 REG3GQ6UW15 175 aa4.05□□□□□ -1.76
SHQ1P1-201ENST00000437111 Q6ZVQ6 151 aa4.05□□□□□ -1.76
SHQ1P1-201ENST00000437111 SERP2Q8N6R1 65 aa4.05□□□□□ -1.76
SHQ1P1-201ENST00000437111 LINC00474Q9P2X8 69 aa4.05□□□□□ -1.76
SHQ1P1-201ENST00000437111 UBE2BP63146 152 aa4.05□□□□□ -1.76
SHQ1P1-201ENST00000437111 RPL37AP8A6NKH3 93 aa4.04□□□□□ -1.76
SHQ1P1-201ENST00000437111 LINC01547P58512 204 aaPredicted RBP4.04□□□□□ -1.76
SHQ1P1-201ENST00000437111 IGLV5-48A0A075B6I7 105 aa4.03□□□□□ -1.76
SHQ1P1-201ENST00000437111 CRYGAP11844 174 aa4.03□□□□□ -1.76
SHQ1P1-201ENST00000437111 Q5VSD8 79 aa4.03□□□□□ -1.76
SHQ1P1-201ENST00000437111 A0A087WVE0 104 aa4.02□□□□□ -1.77
SHQ1P1-201ENST00000437111 NBDYA0A0U1RRE5 68 aa4.02□□□□□ -1.77
SHQ1P1-201ENST00000437111 KRTAP10-2P60368 255 aa4.02□□□□□ -1.77
SHQ1P1-201ENST00000437111 NREPQ16612 68 aa4.02□□□□□ -1.77
SHQ1P1-201ENST00000437111 DEFB105AQ8NG35 78 aa4.02□□□□□ -1.77
SHQ1P1-201ENST00000437111 A0A096LNI7 61 aa4.01□□□□□ -1.77
SHQ1P1-201ENST00000437111 FAM168BA1KXE4 195 aa4.01□□□□□ -1.77
SHQ1P1-201ENST00000437111 KRTAP9-7A8MTY7 169 aa4.01□□□□□ -1.77
SHQ1P1-201ENST00000437111 KRTAP4-16G5E9R7 235 aaPredicted RBP4.01□□□□□ -1.77
SHQ1P1-201ENST00000437111 SS18L2Q9UHA2 77 aa4.01□□□□□ -1.77
SHQ1P1-201ENST00000437111 IGKV2-24A0A0C4DH68 120 aa4□□□□□ -1.77
SHQ1P1-201ENST00000437111 BPY2O14599 106 aa4□□□□□ -1.77
SHQ1P1-201ENST00000437111 TMEM258P61165 79 aa4□□□□□ -1.77
SHQ1P1-201ENST00000437111 C1orf137Q5JT78 98 aa4□□□□□ -1.77
SHQ1P1-201ENST00000437111 LCE1DQ5T752 114 aa4□□□□□ -1.77
SHQ1P1-201ENST00000437111 FAM19A1Q7Z5A9 133 aa4□□□□□ -1.77
SHQ1P1-201ENST00000437111 Q8N377 158 aa4□□□□□ -1.77
SHQ1P1-201ENST00000437111 Q9BRP9 147 aa4□□□□□ -1.77
SHQ1P1-201ENST00000437111 TRAV7A0A075B6U4 112 aa4□□□□□ -1.77
SHQ1P1-201ENST00000437111 H0Y9J4 135 aa4□□□□□ -1.77
SHQ1P1-201ENST00000437111 Q8NBF4 154 aa4□□□□□ -1.77
SHQ1P1-201ENST00000437111 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.99□□□□□ -1.77
SHQ1P1-201ENST00000437111 C9orf163Q8N9P6 203 aa3.99□□□□□ -1.77
SHQ1P1-201ENST00000437111 KRTAP1-5Q9BYS1 174 aa3.99□□□□□ -1.77
SHQ1P1-201ENST00000437111 UBE2AP49459 152 aa3.98□□□□□ -1.77
SHQ1P1-201ENST00000437111 NDUFC1O43677 76 aa3.97□□□□□ -1.77
SHQ1P1-201ENST00000437111 SPRR4Q96PI1 79 aa3.97□□□□□ -1.77
SHQ1P1-201ENST00000437111 HIGD2AQ9BW72 106 aa3.97□□□□□ -1.77
SHQ1P1-201ENST00000437111 SMR3BP02814 79 aaPredicted RBP3.96□□□□□ -1.78
SHQ1P1-201ENST00000437111 PRLHP81277 87 aa3.96□□□□□ -1.78
SHQ1P1-201ENST00000437111 KRTAP7-1Q8IUC3 87 aa3.96□□□□□ -1.78
SHQ1P1-201ENST00000437111 KRTAP4-7Q9BYR0 210 aa3.96□□□□□ -1.78
SHQ1P1-201ENST00000437111 IGLV8-61A0A075B6I0 122 aa3.95□□□□□ -1.78
SHQ1P1-201ENST00000437111 KRTAP29-1A8MX34 341 aaPredicted RBP3.95□□□□□ -1.78
SHQ1P1-201ENST00000437111 J3KT08 172 aa3.95□□□□□ -1.78
SHQ1P1-201ENST00000437111 ERC2-IT1O76042 136 aa3.95□□□□□ -1.78
SHQ1P1-201ENST00000437111 SCXQ7RTU7 201 aa3.95□□□□□ -1.78
SHQ1P1-201ENST00000437111 ST20-AS1Q8NBB2 130 aa3.95□□□□□ -1.78
SHQ1P1-201ENST00000437111 ZNF706Q9Y5V0 76 aaPredicted RBP3.95□□□□□ -1.78
SHQ1P1-201ENST00000437111 LRCOL1A6NCL2 159 aa3.95□□□□□ -1.78
SHQ1P1-201ENST00000437111 ATP5EP56381 51 aaPredicted RBP3.95□□□□□ -1.78
SHQ1P1-201ENST00000437111 DPH3Q96FX2 82 aa3.95□□□□□ -1.78
SHQ1P1-201ENST00000437111 A0A1W2PNN7 141 aa3.94□□□□□ -1.78
SHQ1P1-201ENST00000437111 IGKV4-1P06312 121 aa3.94□□□□□ -1.78
SHQ1P1-201ENST00000437111 SPRR1BP22528 89 aa3.94□□□□□ -1.78
SHQ1P1-201ENST00000437111 PHF5AQ7RTV0 110 aaKnown RBP3.94□□□□□ -1.78
SHQ1P1-201ENST00000437111 C20orf197Q8N268 126 aa3.94□□□□□ -1.78
SHQ1P1-201ENST00000437111 RNF213Q63HN8 5207 aa3.93□□□□□ -1.78
SHQ1P1-201ENST00000437111 A0A1W2PNM2 257 aa3.93□□□□□ -1.78
SHQ1P1-201ENST00000437111 RPL37AP61513 92 aaKnown RBP3.93□□□□□ -1.78
SHQ1P1-201ENST00000437111 KLKP1Q107X0 134 aa3.93□□□□□ -1.78
SHQ1P1-201ENST00000437111 Q6ZRN7 208 aaPredicted RBP3.93□□□□□ -1.78
SHQ1P1-201ENST00000437111 SPACA4Q8TDM5 124 aa3.93□□□□□ -1.78
SHQ1P1-201ENST00000437111 A0A087WTM6 91 aa3.92□□□□□ -1.78
SHQ1P1-201ENST00000437111 FAM236DA0A1B0GTK5 79 aa3.92□□□□□ -1.78
SHQ1P1-201ENST00000437111 CHTF8P0CG12 524 aa3.92□□□□□ -1.78
SHQ1P1-201ENST00000437111 FAM236CP0DP71 79 aa3.92□□□□□ -1.78
SHQ1P1-201ENST00000437111 KRTAP10-1P60331 282 aa3.92□□□□□ -1.78
SHQ1P1-201ENST00000437111 IGFL1Q6UW32 110 aa3.92□□□□□ -1.78
SHQ1P1-201ENST00000437111 LRP1Q07954 4544 aaKnown RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms