RNA–Protein interactions for RNA: ENST00000431239.5

CHD1L-204, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5 BASIC

Gene CHD1L, Length 2,907 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-204ENST00000431239 A0A087WSZ3 146 aa11.58□□□□□ -0.56
CHD1L-204ENST00000431239 Q5XG85 94 aa11.58□□□□□ -0.56
CHD1L-204ENST00000431239 SERP1Q9Y6X1 66 aa11.58□□□□□ -0.56
CHD1L-204ENST00000431239 EPM2AB3EWF7 344 aa11.57□□□□□ -0.56
CHD1L-204ENST00000431239 UBE2AP49459 152 aa11.57□□□□□ -0.56
CHD1L-204ENST00000431239 NDUFC1O43677 76 aa11.56□□□□□ -0.56
CHD1L-204ENST00000431239 A0A0U1RQV1 116 aa11.56□□□□□ -0.56
CHD1L-204ENST00000431239 HRCT1Q6UXD1 115 aa11.56□□□□□ -0.56
CHD1L-204ENST00000431239 PANO1I0J062 215 aa11.53□□□□□ -0.56
CHD1L-204ENST00000431239 C14orf177Q52M58 125 aa11.53□□□□□ -0.56
CHD1L-204ENST00000431239 MDFIQ99750 246 aa11.53□□□□□ -0.56
CHD1L-204ENST00000431239 RPL37AP61513 92 aaKnown RBP11.52□□□□□ -0.57
CHD1L-204ENST00000431239 WFDC13Q8IUB5 93 aa11.5□□□□□ -0.57
CHD1L-204ENST00000431239 LRCOL1A6NCL2 159 aa11.49□□□□□ -0.57
CHD1L-204ENST00000431239 C9orf163Q8N9P6 203 aa11.49□□□□□ -0.57
CHD1L-204ENST00000431239 NBDYA0A0U1RRE5 68 aa11.49□□□□□ -0.57
CHD1L-204ENST00000431239 HCG22E2RYF7 251 aa11.49□□□□□ -0.57
CHD1L-204ENST00000431239 B9D2Q9BPU9 175 aa11.47□□□□□ -0.57
CHD1L-204ENST00000431239 DYNC2H1Q8NCM8 4307 aaKnown RBP11.46□□□□□ -0.57
CHD1L-204ENST00000431239 LINC00474Q9P2X8 69 aa11.46□□□□□ -0.57
CHD1L-204ENST00000431239 STARD9Q9P2P6 4700 aa11.45□□□□□ -0.58
CHD1L-204ENST00000431239 IGLV8-61A0A075B6I0 122 aa11.45□□□□□ -0.58
CHD1L-204ENST00000431239 C5orf47Q569G3 176 aa11.45□□□□□ -0.58
CHD1L-204ENST00000431239 FP248Q71RG6 208 aaPredicted RBP11.43□□□□□ -0.58
CHD1L-204ENST00000431239 ATP5EP56381 51 aaPredicted RBP11.42□□□□□ -0.58
CHD1L-204ENST00000431239 FAM229BQ4G0N7 80 aa11.42□□□□□ -0.58
CHD1L-204ENST00000431239 Q6ZRN7 208 aaPredicted RBP11.42□□□□□ -0.58
CHD1L-204ENST00000431239 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.41□□□□□ -0.58
CHD1L-204ENST00000431239 SMIM26A0A096LP01 95 aa11.39□□□□□ -0.59
CHD1L-204ENST00000431239 PRKDCP78527 4128 aaKnown RBP11.38□□□□□ -0.59
CHD1L-204ENST00000431239 NUPR2A6NF83 97 aa11.38□□□□□ -0.59
CHD1L-204ENST00000431239 LCE6AA0A183 80 aa11.38□□□□□ -0.59
CHD1L-204ENST00000431239 H0Y9J4 135 aa11.38□□□□□ -0.59
CHD1L-204ENST00000431239 PRR4Q16378 134 aa11.37□□□□□ -0.59
CHD1L-204ENST00000431239 IGLV9-49A0A0B4J1Y8 123 aa11.36□□□□□ -0.59
CHD1L-204ENST00000431239 SPRR1BP22528 89 aa11.36□□□□□ -0.59
CHD1L-204ENST00000431239 TGP01266 2768 aa11.36□□□□□ -0.59
CHD1L-204ENST00000431239 MPLKIPQ8TAP9 179 aa11.35□□□□□ -0.59
CHD1L-204ENST00000431239 KMT2AQ03164 3969 aa11.33□□□□□ -0.59
CHD1L-204ENST00000431239 ZCCHC13Q8WW36 166 aaKnown RBP11.32□□□□□ -0.6
CHD1L-204ENST00000431239 MEGF8Q7Z7M0 2845 aa11.32□□□□□ -0.6
CHD1L-204ENST00000431239 SPACA4Q8TDM5 124 aa11.32□□□□□ -0.6
CHD1L-204ENST00000431239 KRTAP13-1Q8IUC0 172 aa11.31□□□□□ -0.6
CHD1L-204ENST00000431239 FRAS1Q86XX4 4008 aa11.31□□□□□ -0.6
CHD1L-204ENST00000431239 CASC2Q6XLA1 102 aa11.31□□□□□ -0.6
CHD1L-204ENST00000431239 HECTD4Q9Y4D8 3996 aa11.31□□□□□ -0.6
CHD1L-204ENST00000431239 LINC00472Q9H8W2 130 aa11.3□□□□□ -0.6
CHD1L-204ENST00000431239 PRR15Q8IV56 129 aa11.29□□□□□ -0.6
CHD1L-204ENST00000431239 A0A087WTM6 91 aa11.29□□□□□ -0.6
CHD1L-204ENST00000431239 PKIGQ9Y2B9 76 aa11.29□□□□□ -0.6
CHD1L-204ENST00000431239 VPS13DQ5THJ4 4388 aa11.28□□□□□ -0.6
CHD1L-204ENST00000431239 A8MWP4 228 aa11.28□□□□□ -0.6
CHD1L-204ENST00000431239 KRTAP29-1A8MX34 341 aaPredicted RBP11.28□□□□□ -0.6
CHD1L-204ENST00000431239 LINC00208Q96KT6 92 aa11.27□□□□□ -0.6
CHD1L-204ENST00000431239 ANAPC11Q9NYG5 84 aa11.26□□□□□ -0.61
CHD1L-204ENST00000431239 LINC00336Q6ZUF6 198 aa11.25□□□□□ -0.61
CHD1L-204ENST00000431239 MP68P56378 58 aa11.25□□□□□ -0.61
CHD1L-204ENST00000431239 RTL8CO15255 209 aa11.24□□□□□ -0.61
CHD1L-204ENST00000431239 C1orf64Q8NEQ6 169 aa11.24□□□□□ -0.61
CHD1L-204ENST00000431239 DNAH2Q9P225 4427 aa11.24□□□□□ -0.61
CHD1L-204ENST00000431239 FBN3Q75N90 2809 aa11.23□□□□□ -0.61
CHD1L-204ENST00000431239 PSORS1C2Q9UIG4 136 aa11.22□□□□□ -0.61
CHD1L-204ENST00000431239 H0Y9P7 68 aa11.22□□□□□ -0.61
CHD1L-204ENST00000431239 hDV103S1A0JD37 113 aa11.21□□□□□ -0.62
CHD1L-204ENST00000431239 MOBPQ13875 183 aa11.19□□□□□ -0.62
CHD1L-204ENST00000431239 TRAV22A0A0B4J277 110 aa11.18□□□□□ -0.62
CHD1L-204ENST00000431239 MMP24-AS1A0A0U1RRL7 71 aa11.17□□□□□ -0.62
CHD1L-204ENST00000431239 DNAH8Q96JB1 4490 aa11.16□□□□□ -0.62
CHD1L-204ENST00000431239 IGLV5-52A0A0A0MRZ9 124 aa11.15□□□□□ -0.62
CHD1L-204ENST00000431239 NDUFB1O75438 58 aa11.15□□□□□ -0.62
CHD1L-204ENST00000431239 Q96NJ1 140 aa11.15□□□□□ -0.62
CHD1L-204ENST00000431239 DNHD1Q96M86 4753 aa11.14□□□□□ -0.63
CHD1L-204ENST00000431239 WWC2-AS2Q96NR7 200 aa11.13□□□□□ -0.63
CHD1L-204ENST00000431239 LINC00483Q53H64 154 aa11.12□□□□□ -0.63
CHD1L-204ENST00000431239 DNAH17Q9UFH2 4485 aa11.11□□□□□ -0.63
CHD1L-204ENST00000431239 Q6ZR54 194 aa11.11□□□□□ -0.63
CHD1L-204ENST00000431239 BRK1Q8WUW1 75 aa11.11□□□□□ -0.63
CHD1L-204ENST00000431239 IGHV6-1A0A0B4J1U7 121 aa11.1□□□□□ -0.63
CHD1L-204ENST00000431239 ZNF706Q9Y5V0 76 aaPredicted RBP11.09□□□□□ -0.63
CHD1L-204ENST00000431239 ZNF861PO60384 105 aa11.08□□□□□ -0.64
CHD1L-204ENST00000431239 CYP4F30PQ9H0H9 118 aa11.08□□□□□ -0.64
CHD1L-204ENST00000431239 PLAC8Q9NZF1 115 aa11.08□□□□□ -0.64
CHD1L-204ENST00000431239 DNAH6Q9C0G6 4158 aa11.07□□□□□ -0.64
CHD1L-204ENST00000431239 NDUFS5O43920 106 aa11.06□□□□□ -0.64
CHD1L-204ENST00000431239 LY6G6CO95867 125 aa11.06□□□□□ -0.64
CHD1L-204ENST00000431239 C1orf134Q5TEV5 83 aa11.05□□□□□ -0.64
CHD1L-204ENST00000431239 C8orf17Q9NRJ1 99 aa11.05□□□□□ -0.64
CHD1L-204ENST00000431239 PRO0628Q9UI54 55 aa11.05□□□□□ -0.64
CHD1L-204ENST00000431239 PCOTHQ58A44 107 aa11.03□□□□□ -0.64
CHD1L-204ENST00000431239 SPINK6Q6UWN8 80 aa11.03□□□□□ -0.64
CHD1L-204ENST00000431239 PSPHP1O15172 72 aa11.03□□□□□ -0.64
CHD1L-204ENST00000431239 A0A087X002 238 aa11.02□□□□□ -0.65
CHD1L-204ENST00000431239 CDK2AP2O75956 126 aa11.02□□□□□ -0.65
CHD1L-204ENST00000431239 NOTCH2NLQ7Z3S9 236 aa11.02□□□□□ -0.65
CHD1L-204ENST00000431239 H3BPC8 53 aa11.01□□□□□ -0.65
CHD1L-204ENST00000431239 A0A1B0GVX0 72 aa11□□□□□ -0.65
CHD1L-204ENST00000431239 CIRBP-AS1Q8TBR5 109 aa10.99□□□□□ -0.65
CHD1L-204ENST00000431239 IGLV7-43P04211 117 aa10.97□□□□□ -0.65
CHD1L-204ENST00000431239 Q1T7F1 81 aa10.96□□□□□ -0.65
CHD1L-204ENST00000431239 ASB16-AS1Q495Z4 193 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms