RNA–Protein interactions for RNA: ENST00000429670.2

GYPB-201, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPB, Length 239 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-201ENST00000429670 ABCC1P33527 1531 aa-0.1□□□□□ -2.43
GYPB-201ENST00000429670 LMTK2Q8IWU2 1503 aa-0.1□□□□□ -2.43
GYPB-201ENST00000429670 TGP01266 2768 aa-0.1□□□□□ -2.43
GYPB-201ENST00000429670 RNF17Q9BXT8 1623 aaKnown RBP-0.1□□□□□ -2.43
GYPB-201ENST00000429670 ZZEF1O43149 2961 aa-0.1□□□□□ -2.43
GYPB-201ENST00000429670 THOC2Q8NI27 1593 aaKnown RBP-0.11□□□□□ -2.43
GYPB-201ENST00000429670 HFM1A2PYH4 1435 aa-0.11□□□□□ -2.43
GYPB-201ENST00000429670 RRBP1Q9P2E9 1410 aaKnown RBP-0.11□□□□□ -2.43
GYPB-201ENST00000429670 PKD1P98161 4303 aa-0.11□□□□□ -2.43
GYPB-201ENST00000429670 SCRIBQ14160 1630 aa-0.11□□□□□ -2.43
GYPB-201ENST00000429670 IFI6P09912 130 aa-0.11□□□□□ -2.43
GYPB-201ENST00000429670 SMIM13P0DJ93 91 aa-0.11□□□□□ -2.43
GYPB-201ENST00000429670 LINC00158P58513 81 aa-0.11□□□□□ -2.43
GYPB-201ENST00000429670 PRO3102Q9H379 93 aa-0.11□□□□□ -2.43
GYPB-201ENST00000429670 EPG5Q9HCE0 2579 aa-0.11□□□□□ -2.43
GYPB-201ENST00000429670 HTTP42858 3142 aa-0.11□□□□□ -2.43
GYPB-201ENST00000429670 LRP1BQ9NZR2 4599 aa-0.11□□□□□ -2.43
GYPB-201ENST00000429670 GCN1Q92616 2671 aaKnown RBP-0.11□□□□□ -2.43
GYPB-201ENST00000429670 CEP290O15078 2479 aa-0.12□□□□□ -2.43
GYPB-201ENST00000429670 KRTAP6-2Q3LI66 62 aa-0.12□□□□□ -2.43
GYPB-201ENST00000429670 KRTAP19-7Q3SYF9 63 aa-0.12□□□□□ -2.43
GYPB-201ENST00000429670 SVEP1Q4LDE5 3571 aa-0.12□□□□□ -2.43
GYPB-201ENST00000429670 KIAA0586Q9BVV6 1533 aa-0.13□□□□□ -2.43
GYPB-201ENST00000429670 NF1P21359 2839 aa-0.13□□□□□ -2.43
GYPB-201ENST00000429670 DSPP15924 2871 aaKnown RBP-0.13□□□□□ -2.43
GYPB-201ENST00000429670 C3P01024 1663 aa-0.13□□□□□ -2.43
GYPB-201ENST00000429670 H0YAA0 97 aa-0.13□□□□□ -2.43
GYPB-201ENST00000429670 BVES-AS1Q5T3Y7 98 aa-0.13□□□□□ -2.43
GYPB-201ENST00000429670 SPG11Q96JI7 2443 aa-0.13□□□□□ -2.43
GYPB-201ENST00000429670 ABCA9Q8IUA7 1624 aa-0.13□□□□□ -2.43
GYPB-201ENST00000429670 MROH1Q8NDA8 1641 aa-0.13□□□□□ -2.43
GYPB-201ENST00000429670 LYSTQ99698 3801 aa-0.14□□□□□ -2.43
GYPB-201ENST00000429670 ITSN2Q9NZM3 1697 aa-0.14□□□□□ -2.43
GYPB-201ENST00000429670 LCE6AA0A183 80 aa-0.14□□□□□ -2.43
GYPB-201ENST00000429670 ANKRD50Q9ULJ7 1429 aa-0.14□□□□□ -2.43
GYPB-201ENST00000429670 MXRA5Q9NR99 2828 aa-0.14□□□□□ -2.43
GYPB-201ENST00000429670 CDC42BPGQ6DT37 1551 aa-0.15□□□□□ -2.43
GYPB-201ENST00000429670 RALGAPBQ86X10 1494 aa-0.15□□□□□ -2.43
GYPB-201ENST00000429670 H3BNG1 76 aa-0.15□□□□□ -2.43
GYPB-201ENST00000429670 H3BVH4 76 aa-0.15□□□□□ -2.43
GYPB-201ENST00000429670 IAPPP10997 89 aa-0.15□□□□□ -2.43
GYPB-201ENST00000429670 SPRR2AP35326 72 aa-0.15□□□□□ -2.43
GYPB-201ENST00000429670 UGGT2Q9NYU1 1516 aa-0.15□□□□□ -2.43
GYPB-201ENST00000429670 KIF1AQ12756 1690 aa-0.15□□□□□ -2.43
GYPB-201ENST00000429670 DMXL1Q9Y485 3027 aa-0.16□□□□□ -2.43
GYPB-201ENST00000429670 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.16□□□□□ -2.43
GYPB-201ENST00000429670 MUC12Q9UKN1 5478 aa-0.16□□□□□ -2.43
GYPB-201ENST00000429670 DEFB106AQ8N104 65 aa-0.16□□□□□ -2.44
GYPB-201ENST00000429670 BPTFQ12830 3046 aa-0.16□□□□□ -2.44
GYPB-201ENST00000429670 AKAP9Q99996 3911 aa-0.16□□□□□ -2.44
GYPB-201ENST00000429670 SONP18583 2426 aaKnown RBP-0.16□□□□□ -2.44
GYPB-201ENST00000429670 CD163L1Q9NR16 1453 aa-0.16□□□□□ -2.44
GYPB-201ENST00000429670 TEP1Q99973 2627 aaKnown RBP-0.17□□□□□ -2.44
GYPB-201ENST00000429670 KALRNO60229 2985 aa-0.17□□□□□ -2.44
GYPB-201ENST00000429670 HIVEP1P15822 2718 aa-0.17□□□□□ -2.44
GYPB-201ENST00000429670 C3orf79P0CE67 100 aa-0.17□□□□□ -2.44
GYPB-201ENST00000429670 DEFB121Q5J5C9 76 aa-0.17□□□□□ -2.44
GYPB-201ENST00000429670 ANKARQ7Z5J8 1434 aa-0.17□□□□□ -2.44
GYPB-201ENST00000429670 INO80Q9ULG1 1556 aaPredicted RBP-0.17□□□□□ -2.44
GYPB-201ENST00000429670 GPR98Q8WXG9 6306 aa-0.17□□□□□ -2.44
GYPB-201ENST00000429670 VPS13BQ7Z7G8 4022 aa-0.17□□□□□ -2.44
GYPB-201ENST00000429670 FASNP49327 2511 aaKnown RBP-0.18□□□□□ -2.44
GYPB-201ENST00000429670 LRRK2Q5S007 2527 aa-0.18□□□□□ -2.44
GYPB-201ENST00000429670 DIP2AQ14689 1571 aa-0.18□□□□□ -2.44
GYPB-201ENST00000429670 DEFB130BP0DP73 79 aa-0.18□□□□□ -2.44
GYPB-201ENST00000429670 DEFB130AP0DP74 79 aa-0.18□□□□□ -2.44
GYPB-201ENST00000429670 SPRR2EP22531 72 aa-0.18□□□□□ -2.44
GYPB-201ENST00000429670 UBL5Q9BZL1 73 aa-0.18□□□□□ -2.44
GYPB-201ENST00000429670 HILPDAQ9Y5L2 63 aa-0.18□□□□□ -2.44
GYPB-201ENST00000429670 MADDQ8WXG6 1647 aa-0.18□□□□□ -2.44
GYPB-201ENST00000429670 ANKRD11Q6UB99 2663 aaPredicted RBP-0.19□□□□□ -2.44
GYPB-201ENST00000429670 CCDC180Q9P1Z9 1646 aa-0.19□□□□□ -2.44
GYPB-201ENST00000429670 HMGA1P17096 107 aaKnown RBP-0.19□□□□□ -2.44
GYPB-201ENST00000429670 ENHOQ6UWT2 76 aa-0.19□□□□□ -2.44
GYPB-201ENST00000429670 C18orf32Q8TCD1 76 aa-0.19□□□□□ -2.44
GYPB-201ENST00000429670 FSIP2Q5CZC0 6907 aa-0.19□□□□□ -2.44
GYPB-201ENST00000429670 TOGARAM1Q9Y4F4 1720 aa-0.19□□□□□ -2.44
GYPB-201ENST00000429670 PCLOQ9Y6V0 5065 aa-0.19□□□□□ -2.44
GYPB-201ENST00000429670 A0A1B0GUL6 1792 aa-0.19□□□□□ -2.44
GYPB-201ENST00000429670 DNAH6Q9C0G6 4158 aa-0.2□□□□□ -2.44
GYPB-201ENST00000429670 SYNE2Q8WXH0 6885 aaKnown RBP-0.2□□□□□ -2.44
GYPB-201ENST00000429670 MTORP42345 2549 aa-0.2□□□□□ -2.44
GYPB-201ENST00000429670 CDC42BPAQ5VT25 1732 aa-0.2□□□□□ -2.44
GYPB-201ENST00000429670 MRPL33O75394 65 aaKnown RBP-0.2□□□□□ -2.44
GYPB-201ENST00000429670 KRTAP19-8Q3LI54 63 aa-0.2□□□□□ -2.44
GYPB-201ENST00000429670 NBPF19A0A087WUL8 3843 aa-0.2□□□□□ -2.44
GYPB-201ENST00000429670 CUBNO60494 3623 aa-0.2□□□□□ -2.44
GYPB-201ENST00000429670 TACC2O95359 2948 aa-0.2□□□□□ -2.44
GYPB-201ENST00000429670 PKD1L2Q7Z442 2459 aa-0.21□□□□□ -2.44
GYPB-201ENST00000429670 LY75O60449 1722 aa-0.21□□□□□ -2.44
GYPB-201ENST00000429670 USP9YO00507 2555 aaPredicted RBP-0.21□□□□□ -2.44
GYPB-201ENST00000429670 ASXL1Q8IXJ9 1541 aa-0.21□□□□□ -2.44
GYPB-201ENST00000429670 DEFB131BA0A096LNP1 70 aa-0.21□□□□□ -2.44
GYPB-201ENST00000429670 LYNX1G3V0Z9 82 aa-0.21□□□□□ -2.44
GYPB-201ENST00000429670 KCNQ1DNQ9H478 68 aa-0.21□□□□□ -2.44
GYPB-201ENST00000429670 MYO18BQ8IUG5 2567 aa-0.21□□□□□ -2.44
GYPB-201ENST00000429670 DSTQ03001 7570 aaKnown RBP-0.22□□□□□ -2.44
GYPB-201ENST00000429670 KMT2CQ8NEZ4 4911 aaKnown RBP-0.22□□□□□ -2.44
GYPB-201ENST00000429670 ACACAQ13085 2346 aa-0.22□□□□□ -2.44
GYPB-201ENST00000429670 PRLHP81277 87 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms