RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 OXLD1Q5BKU9 147 aa5.65□□□□□ -1.51
CDC42BPA-206ENST00000429440 GYPEP15421 78 aa5.64□□□□□ -1.51
CDC42BPA-206ENST00000429440 ZNF706Q9Y5V0 76 aaPredicted RBP5.64□□□□□ -1.51
CDC42BPA-206ENST00000429440 OTOGQ6ZRI0 2925 aa5.64□□□□□ -1.51
CDC42BPA-206ENST00000429440 ANGP03950 147 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-206ENST00000429440 C19orf73Q9NVV2 129 aa5.63□□□□□ -1.51
CDC42BPA-206ENST00000429440 HRES1P13985 223 aa5.62□□□□□ -1.51
CDC42BPA-206ENST00000429440 EGFEM1PQ0D2K5 195 aa5.62□□□□□ -1.51
CDC42BPA-206ENST00000429440 SPATA8Q6RVD6 105 aa5.62□□□□□ -1.51
CDC42BPA-206ENST00000429440 CSAG1Q6PB30 78 aa5.61□□□□□ -1.51
CDC42BPA-206ENST00000429440 HECTD1Q9ULT8 2610 aa5.61□□□□□ -1.51
CDC42BPA-206ENST00000429440 TENM1Q9UKZ4 2725 aa5.6□□□□□ -1.51
CDC42BPA-206ENST00000429440 Q6ZR54 194 aa5.6□□□□□ -1.51
CDC42BPA-206ENST00000429440 TEP1Q99973 2627 aaKnown RBP5.6□□□□□ -1.51
CDC42BPA-206ENST00000429440 IGHV6-1A0A0B4J1U7 121 aa5.59□□□□□ -1.51
CDC42BPA-206ENST00000429440 DEFB131BA0A096LNP1 70 aa5.59□□□□□ -1.51
CDC42BPA-206ENST00000429440 Q6ZRX8 168 aa5.59□□□□□ -1.51
CDC42BPA-206ENST00000429440 PRO0255Q9UI72 69 aa5.59□□□□□ -1.51
CDC42BPA-206ENST00000429440 NBEAL2Q6ZNJ1 2754 aa5.59□□□□□ -1.52
CDC42BPA-206ENST00000429440 NSD1Q96L73 2696 aaPredicted RBP5.59□□□□□ -1.52
CDC42BPA-206ENST00000429440 KRTAP10-3P60369 221 aa5.58□□□□□ -1.52
CDC42BPA-206ENST00000429440 C1orf134Q5TEV5 83 aa5.58□□□□□ -1.52
CDC42BPA-206ENST00000429440 SMR3AQ99954 134 aa5.58□□□□□ -1.52
CDC42BPA-206ENST00000429440 HIVEP2P31629 2446 aa5.58□□□□□ -1.52
CDC42BPA-206ENST00000429440 FN1P02751 2386 aaKnown RBP5.58□□□□□ -1.52
CDC42BPA-206ENST00000429440 CMC4P56277 68 aaPredicted RBP5.58□□□□□ -1.52
CDC42BPA-206ENST00000429440 PRR34Q9NV39 138 aa5.57□□□□□ -1.52
CDC42BPA-206ENST00000429440 TRRAPQ9Y4A5 3859 aa5.57□□□□□ -1.52
CDC42BPA-206ENST00000429440 NOTCH2Q04721 2471 aa5.56□□□□□ -1.52
CDC42BPA-206ENST00000429440 A8MWP4 228 aa5.56□□□□□ -1.52
CDC42BPA-206ENST00000429440 KRTAP4-16G5E9R7 235 aaPredicted RBP5.56□□□□□ -1.52
CDC42BPA-206ENST00000429440 J3QKU1 62 aa5.56□□□□□ -1.52
CDC42BPA-206ENST00000429440 PCOTHQ58A44 107 aa5.56□□□□□ -1.52
CDC42BPA-206ENST00000429440 TP53AIP1Q9HCN2 124 aa5.56□□□□□ -1.52
CDC42BPA-206ENST00000429440 ROMO1P60602 79 aa5.55□□□□□ -1.52
CDC42BPA-206ENST00000429440 CAMK2N2Q96S95 79 aa5.55□□□□□ -1.52
CDC42BPA-206ENST00000429440 DEFB130BP0DP73 79 aa5.54□□□□□ -1.52
CDC42BPA-206ENST00000429440 DEFB130AP0DP74 79 aa5.54□□□□□ -1.52
CDC42BPA-206ENST00000429440 SPRR1AP35321 89 aa5.54□□□□□ -1.52
CDC42BPA-206ENST00000429440 RPL37AP61513 92 aaKnown RBP5.54□□□□□ -1.52
CDC42BPA-206ENST00000429440 A0A096LPF7 62 aa5.53□□□□□ -1.52
CDC42BPA-206ENST00000429440 IGLV8-61A0A075B6I0 122 aa5.53□□□□□ -1.52
CDC42BPA-206ENST00000429440 IGFL1Q6UW32 110 aa5.53□□□□□ -1.52
CDC42BPA-206ENST00000429440 HIVEP1P15822 2718 aa5.53□□□□□ -1.52
CDC42BPA-206ENST00000429440 A0A087WSZ3 146 aa5.52□□□□□ -1.53
CDC42BPA-206ENST00000429440 IGKV2-24A0A0C4DH68 120 aa5.52□□□□□ -1.53
CDC42BPA-206ENST00000429440 MIR22HGQ0VDD5 57 aa5.5□□□□□ -1.53
CDC42BPA-206ENST00000429440 REG3GQ6UW15 175 aa5.5□□□□□ -1.53
CDC42BPA-206ENST00000429440 ATRQ13535 2644 aa5.5□□□□□ -1.53
CDC42BPA-206ENST00000429440 MMP24-AS1A0A0U1RRL7 71 aa5.5□□□□□ -1.53
CDC42BPA-206ENST00000429440 PLA2G2DQ9UNK4 145 aa5.5□□□□□ -1.53
CDC42BPA-206ENST00000429440 LINC00472Q9H8W2 130 aa5.49□□□□□ -1.53
CDC42BPA-206ENST00000429440 X6R8D5 127 aa5.49□□□□□ -1.53
CDC42BPA-206ENST00000429440 UQCR11O14957 56 aa5.49□□□□□ -1.53
CDC42BPA-206ENST00000429440 NOTCH2NLQ7Z3S9 236 aa5.49□□□□□ -1.53
CDC42BPA-206ENST00000429440 LELP1Q5T871 98 aa5.48□□□□□ -1.53
CDC42BPA-206ENST00000429440 ALMS1Q8TCU4 4167 aa5.48□□□□□ -1.53
CDC42BPA-206ENST00000429440 A0A1B0GU69 56 aa5.47□□□□□ -1.53
CDC42BPA-206ENST00000429440 ZNF861PO60384 105 aa5.47□□□□□ -1.53
CDC42BPA-206ENST00000429440 ANK2Q01484 3957 aa5.47□□□□□ -1.53
CDC42BPA-206ENST00000429440 RPL37AP8A6NKH3 93 aa5.47□□□□□ -1.53
CDC42BPA-206ENST00000429440 INAFM1C9JVW0 142 aa5.46□□□□□ -1.53
CDC42BPA-206ENST00000429440 ACYP2P14621 99 aa5.45□□□□□ -1.54
CDC42BPA-206ENST00000429440 A0A0A0MQY5 61 aa5.45□□□□□ -1.54
CDC42BPA-206ENST00000429440 CMYA5Q8N3K9 4069 aa5.44□□□□□ -1.54
CDC42BPA-206ENST00000429440 A0A0G2JQZ4 141 aa5.44□□□□□ -1.54
CDC42BPA-206ENST00000429440 A0A1W2PNN7 141 aa5.44□□□□□ -1.54
CDC42BPA-206ENST00000429440 KRTAP25-1Q3LHN0 102 aa5.44□□□□□ -1.54
CDC42BPA-206ENST00000429440 KRTAP26-1Q6PEX3 210 aa5.44□□□□□ -1.54
CDC42BPA-206ENST00000429440 C15orf56Q8N910 161 aa5.44□□□□□ -1.54
CDC42BPA-206ENST00000429440 TLX1NBP0CAT3 122 aa5.42□□□□□ -1.54
CDC42BPA-206ENST00000429440 PKD1L1Q8TDX9 2849 aa5.42□□□□□ -1.54
CDC42BPA-206ENST00000429440 DEFB4AO15263 64 aa5.42□□□□□ -1.54
CDC42BPA-206ENST00000429440 DEFB135Q30KP9 77 aa5.42□□□□□ -1.54
CDC42BPA-206ENST00000429440 DNAH3Q8TD57 4116 aa5.39□□□□□ -1.55
CDC42BPA-206ENST00000429440 FAM168BA1KXE4 195 aa5.38□□□□□ -1.55
CDC42BPA-206ENST00000429440 TENM3Q9P273 2699 aa5.38□□□□□ -1.55
CDC42BPA-206ENST00000429440 DMAC1Q96GE9 116 aa5.38□□□□□ -1.55
CDC42BPA-206ENST00000429440 FBN1P35555 2871 aaKnown RBP5.37□□□□□ -1.55
CDC42BPA-206ENST00000429440 F8P00451 2351 aa5.37□□□□□ -1.55
CDC42BPA-206ENST00000429440 P0C880 135 aa5.36□□□□□ -1.55
CDC42BPA-206ENST00000429440 C8orf17Q9NRJ1 99 aa5.36□□□□□ -1.55
CDC42BPA-206ENST00000429440 STAB1Q9NY15 2570 aa5.36□□□□□ -1.55
CDC42BPA-206ENST00000429440 TENM2Q9NT68 2774 aa5.34□□□□□ -1.55
CDC42BPA-206ENST00000429440 SPRR1BP22528 89 aa5.33□□□□□ -1.56
CDC42BPA-206ENST00000429440 KRTAP7-1Q8IUC3 87 aa5.33□□□□□ -1.56
CDC42BPA-206ENST00000429440 IGLV5-52A0A0A0MRZ9 124 aa5.33□□□□□ -1.56
CDC42BPA-206ENST00000429440 MRPL34Q9BQ48 92 aaKnown RBP5.33□□□□□ -1.56
CDC42BPA-206ENST00000429440 SPART-AS1P0CW21 52 aa5.32□□□□□ -1.56
CDC42BPA-206ENST00000429440 FBN3Q75N90 2809 aa5.32□□□□□ -1.56
CDC42BPA-206ENST00000429440 KRTAP10-11P60412 298 aa5.32□□□□□ -1.56
CDC42BPA-206ENST00000429440 LINC00483Q53H64 154 aa5.32□□□□□ -1.56
CDC42BPA-206ENST00000429440 IGLV7-43P04211 117 aa5.31□□□□□ -1.56
CDC42BPA-206ENST00000429440 HTN3P15516 51 aa5.31□□□□□ -1.56
CDC42BPA-206ENST00000429440 A8MUU9 505 aa5.3□□□□□ -1.56
CDC42BPA-206ENST00000429440 Q96NJ1 140 aa5.3□□□□□ -1.56
CDC42BPA-206ENST00000429440 NOTCH1P46531 2555 aa5.3□□□□□ -1.56
CDC42BPA-206ENST00000429440 DNAH1Q9P2D7 4330 aa5.29□□□□□ -1.56
CDC42BPA-206ENST00000429440 KRTAP21-3Q3LHN1 58 aa5.29□□□□□ -1.56
CDC42BPA-206ENST00000429440 KRTAP13-3Q3SY46 172 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms