RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 Q6ZVH6 145 aa9.33□□□□□ -0.92
UPK3BP1-201ENST00000428678 VAMP3Q15836 100 aa9.32□□□□□ -0.92
UPK3BP1-201ENST00000428678 Q6ZQY7 126 aa9.32□□□□□ -0.92
UPK3BP1-201ENST00000428678 LST1O00453 97 aa9.3□□□□□ -0.92
UPK3BP1-201ENST00000428678 C3orf79P0CE67 100 aa9.3□□□□□ -0.92
UPK3BP1-201ENST00000428678 OCIAD2Q56VL3 154 aa9.3□□□□□ -0.92
UPK3BP1-201ENST00000428678 LINC00575Q6W349 94 aa9.3□□□□□ -0.92
UPK3BP1-201ENST00000428678 ANKRD39Q53RE8 183 aa9.29□□□□□ -0.92
UPK3BP1-201ENST00000428678 hADV29S1A0JD25 119 aa9.28□□□□□ -0.92
UPK3BP1-201ENST00000428678 HIST1H2BKO60814 126 aa9.28□□□□□ -0.92
UPK3BP1-201ENST00000428678 MT2AP02795 61 aa9.28□□□□□ -0.92
UPK3BP1-201ENST00000428678 HIST1H2BJP06899 126 aa9.28□□□□□ -0.92
UPK3BP1-201ENST00000428678 HIST1H2BOP23527 126 aa9.28□□□□□ -0.92
UPK3BP1-201ENST00000428678 HIST1H2BBP33778 126 aa9.28□□□□□ -0.92
UPK3BP1-201ENST00000428678 HIST1H2BDP58876 126 aa9.28□□□□□ -0.92
UPK3BP1-201ENST00000428678 HIST1H2BCP62807 126 aa9.28□□□□□ -0.92
UPK3BP1-201ENST00000428678 HIST2H2BEQ16778 126 aa9.28□□□□□ -0.92
UPK3BP1-201ENST00000428678 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.28□□□□□ -0.92
UPK3BP1-201ENST00000428678 KRTAP19-1Q8IUB9 90 aa9.28□□□□□ -0.92
UPK3BP1-201ENST00000428678 HIST1H2BHQ93079 126 aa9.28□□□□□ -0.92
UPK3BP1-201ENST00000428678 HIST1H2BNQ99877 126 aa9.28□□□□□ -0.92
UPK3BP1-201ENST00000428678 HIST1H2BMQ99879 126 aa9.28□□□□□ -0.92
UPK3BP1-201ENST00000428678 KRTDAPP60985 99 aa9.27□□□□□ -0.93
UPK3BP1-201ENST00000428678 C20orf166-AS1Q96NR2 134 aa9.27□□□□□ -0.93
UPK3BP1-201ENST00000428678 A8MUU9 505 aa9.24□□□□□ -0.93
UPK3BP1-201ENST00000428678 LCE2BO14633 110 aa9.23□□□□□ -0.93
UPK3BP1-201ENST00000428678 ATOH7Q8N100 152 aa9.23□□□□□ -0.93
UPK3BP1-201ENST00000428678 FAM236DA0A1B0GTK5 79 aa9.22□□□□□ -0.93
UPK3BP1-201ENST00000428678 H3BUT2 72 aa9.22□□□□□ -0.93
UPK3BP1-201ENST00000428678 FAM236CP0DP71 79 aa9.22□□□□□ -0.93
UPK3BP1-201ENST00000428678 MT1FP04733 61 aa9.21□□□□□ -0.94
UPK3BP1-201ENST00000428678 SNHG12Q9BXW3 62 aa9.21□□□□□ -0.94
UPK3BP1-201ENST00000428678 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.2□□□□□ -0.94
UPK3BP1-201ENST00000428678 SS18L2Q9UHA2 77 aa9.2□□□□□ -0.94
UPK3BP1-201ENST00000428678 MACF1Q9UPN3 7388 aaKnown RBP9.2□□□□□ -0.94
UPK3BP1-201ENST00000428678 KRTAP10-10P60014 251 aa9.18□□□□□ -0.94
UPK3BP1-201ENST00000428678 PPDPFLQ8WWR9 84 aa9.18□□□□□ -0.94
UPK3BP1-201ENST00000428678 SCGB1D1O95968 90 aa9.17□□□□□ -0.94
UPK3BP1-201ENST00000428678 KRTAP9-3Q9BYQ3 159 aa9.16□□□□□ -0.94
UPK3BP1-201ENST00000428678 SYNE2Q8WXH0 6885 aaKnown RBP9.15□□□□□ -0.95
UPK3BP1-201ENST00000428678 DSCR10P59022 87 aa9.14□□□□□ -0.95
UPK3BP1-201ENST00000428678 RBM12B-AS1Q9P1G2 102 aa9.11□□□□□ -0.95
UPK3BP1-201ENST00000428678 KRTAP16-1A8MUX0 517 aa9.1□□□□□ -0.95
UPK3BP1-201ENST00000428678 BVES-AS1Q5T3Y7 98 aa9.1□□□□□ -0.95
UPK3BP1-201ENST00000428678 TEN1Q86WV5 123 aa9.1□□□□□ -0.95
UPK3BP1-201ENST00000428678 A0A087WSZ3 146 aa9.09□□□□□ -0.95
UPK3BP1-201ENST00000428678 COA6Q5JTJ3 125 aaKnown RBP9.09□□□□□ -0.95
UPK3BP1-201ENST00000428678 SIGMAR1Q99720 223 aa9.08□□□□□ -0.96
UPK3BP1-201ENST00000428678 SNRPEP62304 92 aaKnown RBP9.07□□□□□ -0.96
UPK3BP1-201ENST00000428678 C12orf57Q99622 126 aa9.07□□□□□ -0.96
UPK3BP1-201ENST00000428678 HRES1P13985 223 aa9.05□□□□□ -0.96
UPK3BP1-201ENST00000428678 MPLKIPQ8TAP9 179 aa9.05□□□□□ -0.96
UPK3BP1-201ENST00000428678 LINC00846Q9NV44 126 aa9.05□□□□□ -0.96
UPK3BP1-201ENST00000428678 LINC00313P59037 77 aa9.03□□□□□ -0.96
UPK3BP1-201ENST00000428678 NDUFV3P56181 108 aaKnown RBP9.02□□□□□ -0.97
UPK3BP1-201ENST00000428678 SNCGO76070 127 aa8.99□□□□□ -0.97
UPK3BP1-201ENST00000428678 HSBP1L1C9JCN9 74 aa8.98□□□□□ -0.97
UPK3BP1-201ENST00000428678 H3BMG7 143 aa8.98□□□□□ -0.97
UPK3BP1-201ENST00000428678 KRTAP19-6Q3LI70 58 aa8.97□□□□□ -0.97
UPK3BP1-201ENST00000428678 NOTCH2NLQ7Z3S9 236 aa8.97□□□□□ -0.97
UPK3BP1-201ENST00000428678 HIST1H4GQ99525 98 aa8.97□□□□□ -0.97
UPK3BP1-201ENST00000428678 IGKV4-1P06312 121 aa8.96□□□□□ -0.98
UPK3BP1-201ENST00000428678 A0A1W2PNM2 257 aa8.93□□□□□ -0.98
UPK3BP1-201ENST00000428678 FABP2P12104 132 aa8.93□□□□□ -0.98
UPK3BP1-201ENST00000428678 FAM218AQ96MZ4 157 aa8.93□□□□□ -0.98
UPK3BP1-201ENST00000428678 H0YGX0 51 aa8.92□□□□□ -0.98
UPK3BP1-201ENST00000428678 MTURNQ8N3F0 131 aa8.92□□□□□ -0.98
UPK3BP1-201ENST00000428678 RAB37Q96AX2 223 aa8.9□□□□□ -0.98
UPK3BP1-201ENST00000428678 IGHV6-1A0A0B4J1U7 121 aa8.88□□□□□ -0.99
UPK3BP1-201ENST00000428678 GHRHP01286 108 aa8.88□□□□□ -0.99
UPK3BP1-201ENST00000428678 DEFB116Q30KQ4 102 aa8.88□□□□□ -0.99
UPK3BP1-201ENST00000428678 HIST1H2BLQ99880 126 aa8.85□□□□□ -0.99
UPK3BP1-201ENST00000428678 TRBV7-4A0A0J9YYF1 115 aa8.84□□□□□ -0.99
UPK3BP1-201ENST00000428678 S100A2P29034 98 aa8.84□□□□□ -0.99
UPK3BP1-201ENST00000428678 KRTAP6-3Q3LI67 103 aa8.84□□□□□ -0.99
UPK3BP1-201ENST00000428678 ANKRD29Q8N6D5 301 aa8.84□□□□□ -0.99
UPK3BP1-201ENST00000428678 A0A1B0GV72 72 aa8.83□□□□□ -1
UPK3BP1-201ENST00000428678 HIST3H2BBQ8N257 126 aa8.83□□□□□ -1
UPK3BP1-201ENST00000428678 A0A1B0GX51 115 aa8.82□□□□□ -1
UPK3BP1-201ENST00000428678 A0A0B4J2C4 111 aa8.81□□□□□ -1
UPK3BP1-201ENST00000428678 A8MWP4 228 aa8.81□□□□□ -1
UPK3BP1-201ENST00000428678 COX8AP10176 69 aa8.81□□□□□ -1
UPK3BP1-201ENST00000428678 LINC00472Q9H8W2 130 aa8.81□□□□□ -1
UPK3BP1-201ENST00000428678 SPINK7P58062 85 aa8.79□□□□□ -1
UPK3BP1-201ENST00000428678 Q8N9P0 234 aaPredicted RBP8.78□□□□□ -1
UPK3BP1-201ENST00000428678 ZCCHC13Q8WW36 166 aaKnown RBP8.78□□□□□ -1
UPK3BP1-201ENST00000428678 C8orf87E5RJ46 101 aa8.77□□□□□ -1.01
UPK3BP1-201ENST00000428678 TRACP01848 142 aa8.76□□□□□ -1.01
UPK3BP1-201ENST00000428678 A0A1B0GVX0 72 aa8.75□□□□□ -1.01
UPK3BP1-201ENST00000428678 DLEU1O43261 78 aa8.75□□□□□ -1.01
UPK3BP1-201ENST00000428678 CCKP06307 115 aa8.75□□□□□ -1.01
UPK3BP1-201ENST00000428678 DNAL4O96015 105 aa8.72□□□□□ -1.01
UPK3BP1-201ENST00000428678 ORMDL1Q9P0S3 153 aa8.72□□□□□ -1.01
UPK3BP1-201ENST00000428678 PRO1854Q9UHT4 67 aa8.72□□□□□ -1.01
UPK3BP1-201ENST00000428678 TRIAP1O43715 76 aa8.71□□□□□ -1.02
UPK3BP1-201ENST00000428678 WFDC13Q8IUB5 93 aa8.71□□□□□ -1.02
UPK3BP1-201ENST00000428678 C14orf144Q96I85 54 aa8.71□□□□□ -1.02
UPK3BP1-201ENST00000428678 HIGD1BQ9P298 99 aa8.7□□□□□ -1.02
UPK3BP1-201ENST00000428678 H3BQ85 93 aa8.68□□□□□ -1.02
UPK3BP1-201ENST00000428678 VPS25Q9BRG1 176 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms