RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 NCS1P62166 190 aa-1.59□□□□□ -2.66
LINC02541-201ENST00000427157 HSD52Q0P140 79 aa-1.59□□□□□ -2.66
LINC02541-201ENST00000427157 ARL11Q969Q4 196 aa-1.59□□□□□ -2.66
LINC02541-201ENST00000427157 UTRNP46939 3433 aa-1.59□□□□□ -2.66
LINC02541-201ENST00000427157 DDX60LQ5H9U9 1706 aaKnown RBP-1.6□□□□□ -2.67
LINC02541-201ENST00000427157 C7orf77A4D0Y5 90 aa-1.6□□□□□ -2.67
LINC02541-201ENST00000427157 COX6CP09669 75 aa-1.6□□□□□ -2.67
LINC02541-201ENST00000427157 PSMG3Q9BT73 122 aaPredicted RBP-1.6□□□□□ -2.67
LINC02541-201ENST00000427157 TOP2BQ02880 1626 aa-1.6□□□□□ -2.67
LINC02541-201ENST00000427157 NRXN3Q9Y4C0 1643 aa-1.6□□□□□ -2.67
LINC02541-201ENST00000427157 RGPD1P0DJD0 1748 aa-1.6□□□□□ -2.67
LINC02541-201ENST00000427157 PPLO60437 1756 aa-1.61□□□□□ -2.67
LINC02541-201ENST00000427157 TRAPPC2P0DI81 140 aa-1.61□□□□□ -2.67
LINC02541-201ENST00000427157 TRAPPC2BP0DI82 140 aa-1.61□□□□□ -2.67
LINC02541-201ENST00000427157 HIST1H1AQ02539 215 aaPredicted RBP-1.61□□□□□ -2.67
LINC02541-201ENST00000427157 SKA2Q8WVK7 121 aaPredicted RBP-1.61□□□□□ -2.67
LINC02541-201ENST00000427157 CPSF1Q10570 1443 aaKnown RBP-1.61□□□□□ -2.67
LINC02541-201ENST00000427157 SCAPERQ9BY12 1400 aa-1.61□□□□□ -2.67
LINC02541-201ENST00000427157 PREX2Q70Z35 1606 aa-1.62□□□□□ -2.67
LINC02541-201ENST00000427157 TJP1Q07157 1748 aa-1.62□□□□□ -2.67
LINC02541-201ENST00000427157 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.62□□□□□ -2.67
LINC02541-201ENST00000427157 C12orf73Q69YU5 71 aa-1.62□□□□□ -2.67
LINC02541-201ENST00000427157 C12orf57Q99622 126 aa-1.62□□□□□ -2.67
LINC02541-201ENST00000427157 VAMP8Q9BV40 100 aa-1.62□□□□□ -2.67
LINC02541-201ENST00000427157 SPANXDQ9BXN6 97 aa-1.62□□□□□ -2.67
LINC02541-201ENST00000427157 CLASP1Q7Z460 1538 aa-1.62□□□□□ -2.67
LINC02541-201ENST00000427157 ANKRD36BQ8N2N9 1353 aa-1.62□□□□□ -2.67
LINC02541-201ENST00000427157 LTN1O94822 1766 aa-1.62□□□□□ -2.67
LINC02541-201ENST00000427157 KIF14Q15058 1648 aa-1.62□□□□□ -2.67
LINC02541-201ENST00000427157 MAP3K4Q9Y6R4 1608 aa-1.62□□□□□ -2.67
LINC02541-201ENST00000427157 CHD1O14646 1710 aa-1.63□□□□□ -2.67
LINC02541-201ENST00000427157 TSTD3H0UI37 97 aa-1.63□□□□□ -2.67
LINC02541-201ENST00000427157 CCDC58Q4VC31 144 aa-1.63□□□□□ -2.67
LINC02541-201ENST00000427157 ZNF436-AS1Q8NC38 126 aaPredicted RBP-1.63□□□□□ -2.67
LINC02541-201ENST00000427157 GAFA1Q96PS6 74 aa-1.63□□□□□ -2.67
LINC02541-201ENST00000427157 LINC00474Q9P2X8 69 aa-1.63□□□□□ -2.67
LINC02541-201ENST00000427157 NEXMIFQ5QGS0 1516 aa-1.63□□□□□ -2.67
LINC02541-201ENST00000427157 F6UZH7 168 aa-1.64□□□□□ -2.67
LINC02541-201ENST00000427157 DBIP07108 87 aaKnown RBP-1.64□□□□□ -2.67
LINC02541-201ENST00000427157 Q0VG73 95 aa-1.64□□□□□ -2.67
LINC02541-201ENST00000427157 Q56UQ5 140 aa-1.64□□□□□ -2.67
LINC02541-201ENST00000427157 MINOS1Q5TGZ0 78 aa-1.64□□□□□ -2.67
LINC02541-201ENST00000427157 NCBP2-AS2Q69YL0 99 aa-1.64□□□□□ -2.67
LINC02541-201ENST00000427157 KCNRGQ8N5I3 272 aa-1.64□□□□□ -2.67
LINC02541-201ENST00000427157 MANBALQ9NQG1 85 aa-1.64□□□□□ -2.67
LINC02541-201ENST00000427157 PRO1854Q9UHT4 67 aa-1.64□□□□□ -2.67
LINC02541-201ENST00000427157 TRAV21A0A0B4J279 112 aa-1.65□□□□□ -2.67
LINC02541-201ENST00000427157 SFTA3P0C7M3 94 aa-1.65□□□□□ -2.67
LINC02541-201ENST00000427157 ANP32BQ92688 251 aaKnown RBP-1.65□□□□□ -2.67
LINC02541-201ENST00000427157 TCEAL4Q96EI5 215 aa-1.65□□□□□ -2.67
LINC02541-201ENST00000427157 FAM208AQ9UK61 1670 aaKnown RBP-1.65□□□□□ -2.67
LINC02541-201ENST00000427157 CC2D2AQ9P2K1 1620 aa-1.66□□□□□ -2.67
LINC02541-201ENST00000427157 RICTORQ6R327 1708 aa-1.66□□□□□ -2.67
LINC02541-201ENST00000427157 NRAPQ86VF7 1730 aa-1.66□□□□□ -2.67
LINC02541-201ENST00000427157 ABCA3Q99758 1704 aa-1.66□□□□□ -2.67
LINC02541-201ENST00000427157 DIP2BQ9P265 1576 aa-1.66□□□□□ -2.68
LINC02541-201ENST00000427157 CCNB3Q8WWL7 1395 aa-1.66□□□□□ -2.68
LINC02541-201ENST00000427157 DEFB131BA0A096LNP1 70 aa-1.66□□□□□ -2.68
LINC02541-201ENST00000427157 TMEM218A2RU14 115 aa-1.66□□□□□ -2.68
LINC02541-201ENST00000427157 MIF4GDA9UHW6 222 aaKnown RBP-1.66□□□□□ -2.68
LINC02541-201ENST00000427157 TSPAN19P0C672 248 aa-1.66□□□□□ -2.68
LINC02541-201ENST00000427157 GUCA1AP43080 201 aaPredicted RBP-1.66□□□□□ -2.68
LINC02541-201ENST00000427157 CENPHQ9H3R5 247 aa-1.66□□□□□ -2.68
LINC02541-201ENST00000427157 C6orf48Q9UBA6 75 aa-1.66□□□□□ -2.68
LINC02541-201ENST00000427157 ABCC2Q92887 1545 aa-1.66□□□□□ -2.68
LINC02541-201ENST00000427157 IQCF6A8MYZ5 107 aa-1.67□□□□□ -2.68
LINC02541-201ENST00000427157 TMEM262E9PQX1 116 aa-1.67□□□□□ -2.68
LINC02541-201ENST00000427157 FABP1P07148 127 aa-1.67□□□□□ -2.68
LINC02541-201ENST00000427157 FCER1GP30273 86 aa-1.67□□□□□ -2.68
LINC02541-201ENST00000427157 GNG11P61952 73 aa-1.67□□□□□ -2.68
LINC02541-201ENST00000427157 CCDC153Q494R4 210 aa-1.67□□□□□ -2.68
LINC02541-201ENST00000427157 ALKAL2Q6UX46 152 aa-1.67□□□□□ -2.68
LINC02541-201ENST00000427157 ACBD7Q8N6N7 88 aa-1.67□□□□□ -2.68
LINC02541-201ENST00000427157 C1orf54Q8WWF1 131 aa-1.67□□□□□ -2.68
LINC02541-201ENST00000427157 LSM10Q969L4 123 aaKnown RBP-1.67□□□□□ -2.68
LINC02541-201ENST00000427157 PPP3R2Q96LZ3 170 aa-1.67□□□□□ -2.68
LINC02541-201ENST00000427157 CGREF1Q99674 301 aa-1.67□□□□□ -2.68
LINC02541-201ENST00000427157 DDA1Q9BW61 102 aa-1.67□□□□□ -2.68
LINC02541-201ENST00000427157 RERGLQ9H628 205 aa-1.67□□□□□ -2.68
LINC02541-201ENST00000427157 GSKIPQ9P0R6 139 aa-1.67□□□□□ -2.68
LINC02541-201ENST00000427157 GINS2Q9Y248 185 aa-1.67□□□□□ -2.68
LINC02541-201ENST00000427157 ANKRD26Q9UPS8 1709 aa-1.67□□□□□ -2.68
LINC02541-201ENST00000427157 INO80Q9ULG1 1556 aaPredicted RBP-1.68□□□□□ -2.68
LINC02541-201ENST00000427157 CFTRP13569 1480 aa-1.68□□□□□ -2.68
LINC02541-201ENST00000427157 RNF17Q9BXT8 1623 aaKnown RBP-1.68□□□□□ -2.68
LINC02541-201ENST00000427157 TRBV25-1A0A075B6N4 114 aa-1.68□□□□□ -2.68
LINC02541-201ENST00000427157 CRYM-AS1A6NIL9 109 aa-1.68□□□□□ -2.68
LINC02541-201ENST00000427157 IGLC6P0CF74 106 aa-1.68□□□□□ -2.68
LINC02541-201ENST00000427157 HMGN3Q15651 99 aa-1.68□□□□□ -2.68
LINC02541-201ENST00000427157 HSPB11Q9Y547 144 aa-1.68□□□□□ -2.68
LINC02541-201ENST00000427157 UACAQ9BZF9 1416 aa-1.68□□□□□ -2.68
LINC02541-201ENST00000427157 A0A1B0GUT8 65 aa-1.69□□□□□ -2.68
LINC02541-201ENST00000427157 D6R8Y8 96 aa-1.69□□□□□ -2.68
LINC02541-201ENST00000427157 MRPL33O75394 65 aaKnown RBP-1.69□□□□□ -2.68
LINC02541-201ENST00000427157 PMCHL1Q16048 86 aa-1.69□□□□□ -2.68
LINC02541-201ENST00000427157 MORN2Q502X0 79 aa-1.69□□□□□ -2.68
LINC02541-201ENST00000427157 MUSTN1Q8IVN3 82 aa-1.69□□□□□ -2.68
LINC02541-201ENST00000427157 C8orf59Q8N0T1 100 aaPredicted RBP-1.69□□□□□ -2.68
LINC02541-201ENST00000427157 C20orf78Q9BR46 151 aa-1.69□□□□□ -2.68
LINC02541-201ENST00000427157 CACFD1Q9UGQ2 172 aa-1.69□□□□□ -2.68
Retrieved 100 of 20,778 RNA–protein pairs in 192.3 ms