RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 SMR3BP02814 79 aaPredicted RBP12.38□□□□□ -0.43
HCG18-235ENST00000426882 SPANXA2-OT1Q8N9U9 137 aa12.37□□□□□ -0.43
HCG18-235ENST00000426882 NBEAL1Q6ZS30 2694 aa12.36□□□□□ -0.43
HCG18-235ENST00000426882 UQCR11O14957 56 aa12.36□□□□□ -0.43
HCG18-235ENST00000426882 DNAH14Q0VDD8 3507 aa12.36□□□□□ -0.43
HCG18-235ENST00000426882 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.35□□□□□ -0.43
HCG18-235ENST00000426882 FLNCQ14315 2725 aa12.34□□□□□ -0.43
HCG18-235ENST00000426882 C9orf92A6NGG3 77 aa12.33□□□□□ -0.44
HCG18-235ENST00000426882 SPRR1AP35321 89 aa12.33□□□□□ -0.44
HCG18-235ENST00000426882 KALRNO60229 2985 aa12.33□□□□□ -0.44
HCG18-235ENST00000426882 ATMQ13315 3056 aa12.31□□□□□ -0.44
HCG18-235ENST00000426882 TNP2Q05952 138 aa12.3□□□□□ -0.44
HCG18-235ENST00000426882 ADGRG4Q8IZF6 3080 aa12.27□□□□□ -0.44
HCG18-235ENST00000426882 BOD1L1Q8NFC6 3051 aa12.26□□□□□ -0.45
HCG18-235ENST00000426882 FRYLO94915 3013 aa12.24□□□□□ -0.45
HCG18-235ENST00000426882 CYSTM1Q9H1C7 97 aa12.24□□□□□ -0.45
HCG18-235ENST00000426882 KRTAP26-1Q6PEX3 210 aa12.24□□□□□ -0.45
HCG18-235ENST00000426882 MIR22HGQ0VDD5 57 aa12.23□□□□□ -0.45
HCG18-235ENST00000426882 ITPR1Q14643 2758 aa12.22□□□□□ -0.45
HCG18-235ENST00000426882 TACC2O95359 2948 aa12.21□□□□□ -0.46
HCG18-235ENST00000426882 COL12A1Q99715 3063 aa12.18□□□□□ -0.46
HCG18-235ENST00000426882 CD164Q04900 197 aa12.18□□□□□ -0.46
HCG18-235ENST00000426882 PRR26Q8N8Z3 221 aa12.17□□□□□ -0.46
HCG18-235ENST00000426882 KRTAP1-5Q9BYS1 174 aa12.17□□□□□ -0.46
HCG18-235ENST00000426882 Q8N1X5 172 aa12.15□□□□□ -0.46
HCG18-235ENST00000426882 MMP24-AS1A0A0U1RRL7 71 aa12.14□□□□□ -0.47
HCG18-235ENST00000426882 Q1T7F1 81 aa12.12□□□□□ -0.47
HCG18-235ENST00000426882 IGLV7-46A0A075B6I9 117 aa12.12□□□□□ -0.47
HCG18-235ENST00000426882 SPRR1BP22528 89 aa12.11□□□□□ -0.47
HCG18-235ENST00000426882 PLAC8Q9NZF1 115 aa12.11□□□□□ -0.47
HCG18-235ENST00000426882 DMXL2Q8TDJ6 3036 aa12.1□□□□□ -0.47
HCG18-235ENST00000426882 NSD1Q96L73 2696 aaPredicted RBP12.1□□□□□ -0.47
HCG18-235ENST00000426882 LRBAP50851 2863 aa12.1□□□□□ -0.47
HCG18-235ENST00000426882 LINC00472Q9H8W2 130 aa12.07□□□□□ -0.48
HCG18-235ENST00000426882 CDC42SE1Q9NRR8 79 aa12.05□□□□□ -0.48
HCG18-235ENST00000426882 J3QL48 77 aa12.05□□□□□ -0.48
HCG18-235ENST00000426882 COL6A3P12111 3177 aa12.04□□□□□ -0.48
HCG18-235ENST00000426882 HRES1P13985 223 aa12.03□□□□□ -0.48
HCG18-235ENST00000426882 FAM229BQ4G0N7 80 aa12.03□□□□□ -0.48
HCG18-235ENST00000426882 Q5XG85 94 aa12.02□□□□□ -0.49
HCG18-235ENST00000426882 KTN1-AS1Q86SY8 53 aa12.02□□□□□ -0.49
HCG18-235ENST00000426882 ITPR2Q14571 2701 aa12.01□□□□□ -0.49
HCG18-235ENST00000426882 FP248Q71RG6 208 aaPredicted RBP12□□□□□ -0.49
HCG18-235ENST00000426882 STAB2Q8WWQ8 2551 aa11.97□□□□□ -0.49
HCG18-235ENST00000426882 Q8N9P0 234 aaPredicted RBP11.97□□□□□ -0.49
HCG18-235ENST00000426882 KRTAP4-16G5E9R7 235 aaPredicted RBP11.95□□□□□ -0.5
HCG18-235ENST00000426882 SPINT4Q6UDR6 99 aa11.94□□□□□ -0.5
HCG18-235ENST00000426882 ZZEF1O43149 2961 aa11.94□□□□□ -0.5
HCG18-235ENST00000426882 ASH1LQ9NR48 2969 aaKnown RBP11.94□□□□□ -0.5
HCG18-235ENST00000426882 BAHCC1Q9P281 2608 aa11.93□□□□□ -0.5
HCG18-235ENST00000426882 UTP20O75691 2785 aaKnown RBP11.93□□□□□ -0.5
HCG18-235ENST00000426882 SPEGQ15772 3267 aa11.93□□□□□ -0.5
HCG18-235ENST00000426882 COX6B2Q6YFQ2 88 aa11.92□□□□□ -0.5
HCG18-235ENST00000426882 Q75L30 129 aa11.89□□□□□ -0.51
HCG18-235ENST00000426882 LCA10Q71F78 164 aa11.88□□□□□ -0.51
HCG18-235ENST00000426882 CFAP47Q6ZTR5 3102 aa11.87□□□□□ -0.51
HCG18-235ENST00000426882 OXTP01178 125 aa11.87□□□□□ -0.51
HCG18-235ENST00000426882 RBM12B-AS1Q9P1G2 102 aa11.86□□□□□ -0.51
HCG18-235ENST00000426882 LINC01558Q9Y6Z2 57 aa11.86□□□□□ -0.51
HCG18-235ENST00000426882 CRIPTQ9P021 101 aa11.86□□□□□ -0.51
HCG18-235ENST00000426882 A0A0D9SG42 100 aa11.85□□□□□ -0.51
HCG18-235ENST00000426882 PANO1I0J062 215 aa11.84□□□□□ -0.51
HCG18-235ENST00000426882 Q5W150 140 aa11.84□□□□□ -0.51
HCG18-235ENST00000426882 ZCCHC13Q8WW36 166 aaKnown RBP11.82□□□□□ -0.52
HCG18-235ENST00000426882 EYSQ5T1H1 3165 aa11.82□□□□□ -0.52
HCG18-235ENST00000426882 ZANQ9Y493 2812 aa11.81□□□□□ -0.52
HCG18-235ENST00000426882 REV3LO60673 3130 aa11.8□□□□□ -0.52
HCG18-235ENST00000426882 HIVEP1P15822 2718 aa11.76□□□□□ -0.53
HCG18-235ENST00000426882 Q5VV11 94 aa11.76□□□□□ -0.53
HCG18-235ENST00000426882 NIPBLQ6KC79 2804 aaeCLIP11.76□□□□□ -0.53
HCG18-235ENST00000426882 LINC00483Q53H64 154 aa11.76□□□□□ -0.53
HCG18-235ENST00000426882 SPTBN5Q9NRC6 3674 aaKnown RBP11.76□□□□□ -0.53
HCG18-235ENST00000426882 KRTAP10-2P60368 255 aa11.75□□□□□ -0.53
HCG18-235ENST00000426882 LINC01554Q52M75 96 aa11.75□□□□□ -0.53
HCG18-235ENST00000426882 CELSR2Q9HCU4 2923 aa11.75□□□□□ -0.53
HCG18-235ENST00000426882 A0A1B0GU33 70 aa11.75□□□□□ -0.53
HCG18-235ENST00000426882 KRTAP10-1P60331 282 aa11.74□□□□□ -0.53
HCG18-235ENST00000426882 APCP25054 2843 aa11.73□□□□□ -0.53
HCG18-235ENST00000426882 DMXL1Q9Y485 3027 aa11.71□□□□□ -0.53
HCG18-235ENST00000426882 KRTAP29-1A8MX34 341 aaPredicted RBP11.71□□□□□ -0.53
HCG18-235ENST00000426882 TNRC18O15417 2968 aaPredicted RBP11.71□□□□□ -0.54
HCG18-235ENST00000426882 Q6ZSA8 131 aa11.69□□□□□ -0.54
HCG18-235ENST00000426882 Q6ZR54 194 aa11.65□□□□□ -0.54
HCG18-235ENST00000426882 SPINK7P58062 85 aa11.65□□□□□ -0.54
HCG18-235ENST00000426882 DMBT1Q9UGM3 2413 aaPredicted RBP11.64□□□□□ -0.55
HCG18-235ENST00000426882 KRTAP11-1Q8IUC1 163 aa11.64□□□□□ -0.55
HCG18-235ENST00000426882 KRTAP7-1Q8IUC3 87 aa11.64□□□□□ -0.55
HCG18-235ENST00000426882 FLG2Q5D862 2391 aaPredicted RBP11.64□□□□□ -0.55
HCG18-235ENST00000426882 LOC400499M0QZD8 3231 aa11.64□□□□□ -0.55
HCG18-235ENST00000426882 KMT2BQ9UMN6 2715 aaPredicted RBP11.62□□□□□ -0.55
HCG18-235ENST00000426882 HRNRQ86YZ3 2850 aaPredicted RBP11.6□□□□□ -0.55
HCG18-235ENST00000426882 USP34Q70CQ2 3546 aa11.58□□□□□ -0.55
HCG18-235ENST00000426882 DCHS2Q6V1P9 2916 aa11.58□□□□□ -0.56
HCG18-235ENST00000426882 DMAC1Q96GE9 116 aa11.55□□□□□ -0.56
HCG18-235ENST00000426882 A0A087X002 238 aa11.55□□□□□ -0.56
HCG18-235ENST00000426882 Q6ZRN7 208 aaPredicted RBP11.54□□□□□ -0.56
HCG18-235ENST00000426882 NOTCH2NLQ7Z3S9 236 aa11.53□□□□□ -0.56
HCG18-235ENST00000426882 PRAC1Q96KF2 57 aa11.51□□□□□ -0.57
HCG18-235ENST00000426882 NF1P21359 2839 aa11.49□□□□□ -0.57
HCG18-235ENST00000426882 LCE6AA0A183 80 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms