RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 LINC00846Q9NV44 126 aa6.28□□□□□ -1.4
CMSS1-201ENST00000421999 ANAPC11Q9NYG5 84 aa6.28□□□□□ -1.4
CMSS1-201ENST00000421999 TLX1NBP0CAT3 122 aa6.28□□□□□ -1.4
CMSS1-201ENST00000421999 Q8N9L7 120 aa6.28□□□□□ -1.4
CMSS1-201ENST00000421999 LINC00208Q96KT6 92 aa6.27□□□□□ -1.41
CMSS1-201ENST00000421999 TRBV7-7A0A0K0K1E9 115 aa6.26□□□□□ -1.41
CMSS1-201ENST00000421999 SNURFQ9Y675 71 aa6.26□□□□□ -1.41
CMSS1-201ENST00000421999 KRTAP21-3Q3LHN1 58 aa6.25□□□□□ -1.41
CMSS1-201ENST00000421999 IGLV7-43P04211 117 aa6.25□□□□□ -1.41
CMSS1-201ENST00000421999 PKD1L1Q8TDX9 2849 aa6.25□□□□□ -1.41
CMSS1-201ENST00000421999 IGKV2D-30A0A075B6S6 120 aa6.23□□□□□ -1.41
CMSS1-201ENST00000421999 LCE6AA0A183 80 aa6.23□□□□□ -1.41
CMSS1-201ENST00000421999 HCG22E2RYF7 251 aa6.23□□□□□ -1.41
CMSS1-201ENST00000421999 IGKV2-30P06310 120 aa6.23□□□□□ -1.41
CMSS1-201ENST00000421999 C4orf26Q17RF5 130 aa6.23□□□□□ -1.41
CMSS1-201ENST00000421999 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.23□□□□□ -1.41
CMSS1-201ENST00000421999 LINC00304Q8N9R0 145 aa6.23□□□□□ -1.41
CMSS1-201ENST00000421999 ANK3Q12955 4377 aaKnown RBP6.23□□□□□ -1.41
CMSS1-201ENST00000421999 PCOTHQ58A44 107 aa6.21□□□□□ -1.42
CMSS1-201ENST00000421999 SMIM26A0A096LP01 95 aa6.21□□□□□ -1.42
CMSS1-201ENST00000421999 PLA2G2DQ9UNK4 145 aa6.2□□□□□ -1.42
CMSS1-201ENST00000421999 KRTAP26-1Q6PEX3 210 aa6.2□□□□□ -1.42
CMSS1-201ENST00000421999 SSBP3-AS1Q7Z2R9 100 aa6.2□□□□□ -1.42
CMSS1-201ENST00000421999 A0A0G2JQZ4 141 aa6.19□□□□□ -1.42
CMSS1-201ENST00000421999 SERP1Q9Y6X1 66 aa6.19□□□□□ -1.42
CMSS1-201ENST00000421999 ERC2-IT1O76042 136 aa6.18□□□□□ -1.42
CMSS1-201ENST00000421999 FLG2Q5D862 2391 aaPredicted RBP6.18□□□□□ -1.42
CMSS1-201ENST00000421999 LINC00313P59037 77 aa6.18□□□□□ -1.42
CMSS1-201ENST00000421999 hDV103S1A0JD37 113 aa6.17□□□□□ -1.42
CMSS1-201ENST00000421999 SPINK1P00995 79 aa6.17□□□□□ -1.42
CMSS1-201ENST00000421999 Q6ZQT0 140 aa6.17□□□□□ -1.42
CMSS1-201ENST00000421999 Q96NJ1 140 aa6.17□□□□□ -1.42
CMSS1-201ENST00000421999 TRRAPQ9Y4A5 3859 aa6.17□□□□□ -1.42
CMSS1-201ENST00000421999 SPAG11AQ6PDA7 123 aa6.16□□□□□ -1.42
CMSS1-201ENST00000421999 Q8N377 158 aa6.16□□□□□ -1.42
CMSS1-201ENST00000421999 H0Y9P7 68 aa6.16□□□□□ -1.42
CMSS1-201ENST00000421999 MPLKIPQ8TAP9 179 aa6.16□□□□□ -1.42
CMSS1-201ENST00000421999 IGFL1Q6UW32 110 aa6.15□□□□□ -1.42
CMSS1-201ENST00000421999 SPRR4Q96PI1 79 aa6.15□□□□□ -1.43
CMSS1-201ENST00000421999 TRBV7-4A0A0J9YYF1 115 aa6.15□□□□□ -1.43
CMSS1-201ENST00000421999 TGP01266 2768 aa6.15□□□□□ -1.43
CMSS1-201ENST00000421999 ATP11AUNQ6ZP68 121 aa6.14□□□□□ -1.43
CMSS1-201ENST00000421999 Q8NDZ9 215 aa6.14□□□□□ -1.43
CMSS1-201ENST00000421999 TRAV7A0A075B6U4 112 aa6.14□□□□□ -1.43
CMSS1-201ENST00000421999 A0A1B0GW54 56 aa6.14□□□□□ -1.43
CMSS1-201ENST00000421999 ATP5EP56381 51 aaPredicted RBP6.14□□□□□ -1.43
CMSS1-201ENST00000421999 CXCL6P80162 114 aa6.13□□□□□ -1.43
CMSS1-201ENST00000421999 SMIM29Q86T20 159 aa6.13□□□□□ -1.43
CMSS1-201ENST00000421999 C9orf92A6NGG3 77 aa6.12□□□□□ -1.43
CMSS1-201ENST00000421999 LOC110117498A0A087WWA1 95 aa6.12□□□□□ -1.43
CMSS1-201ENST00000421999 NDUFC1O43677 76 aa6.12□□□□□ -1.43
CMSS1-201ENST00000421999 KRTAP10-2P60368 255 aa6.11□□□□□ -1.43
CMSS1-201ENST00000421999 PRR26Q8N8Z3 221 aa6.11□□□□□ -1.43
CMSS1-201ENST00000421999 C1orf64Q8NEQ6 169 aa6.1□□□□□ -1.43
CMSS1-201ENST00000421999 IGLV5-37A0A075B6J1 123 aa6.1□□□□□ -1.43
CMSS1-201ENST00000421999 Q6ZR54 194 aa6.09□□□□□ -1.43
CMSS1-201ENST00000421999 COX6B2Q6YFQ2 88 aa6.09□□□□□ -1.43
CMSS1-201ENST00000421999 OBSCN-AS1Q96MR7 158 aa6.09□□□□□ -1.43
CMSS1-201ENST00000421999 SPTSSBQ8NFR3 76 aa6.09□□□□□ -1.43
CMSS1-201ENST00000421999 KRTAP10-1P60331 282 aa6.08□□□□□ -1.44
CMSS1-201ENST00000421999 TENM2Q9NT68 2774 aa6.08□□□□□ -1.44
CMSS1-201ENST00000421999 PLAC8Q9NZF1 115 aa6.08□□□□□ -1.44
CMSS1-201ENST00000421999 PMAIP1Q13794 54 aa6.08□□□□□ -1.44
CMSS1-201ENST00000421999 DSCR10P59022 87 aa6.07□□□□□ -1.44
CMSS1-201ENST00000421999 TMEM254Q8TBM7 123 aa6.07□□□□□ -1.44
CMSS1-201ENST00000421999 TP53AIP1Q9HCN2 124 aa6.07□□□□□ -1.44
CMSS1-201ENST00000421999 A8MWP4 228 aa6.06□□□□□ -1.44
CMSS1-201ENST00000421999 K7EQZ3 153 aa6.06□□□□□ -1.44
CMSS1-201ENST00000421999 C8orf87E5RJ46 101 aa6.05□□□□□ -1.44
CMSS1-201ENST00000421999 Q5VSD8 79 aa6.04□□□□□ -1.44
CMSS1-201ENST00000421999 MRPL34Q9BQ48 92 aaKnown RBP6.03□□□□□ -1.44
CMSS1-201ENST00000421999 C7orf65Q6ZTY9 151 aa6.03□□□□□ -1.44
CMSS1-201ENST00000421999 TRAV22A0A0B4J277 110 aa6.03□□□□□ -1.44
CMSS1-201ENST00000421999 PANO1I0J062 215 aa6.03□□□□□ -1.44
CMSS1-201ENST00000421999 K7ERS5 55 aa6.03□□□□□ -1.44
CMSS1-201ENST00000421999 Q6ZRN7 208 aaPredicted RBP6.03□□□□□ -1.44
CMSS1-201ENST00000421999 PRR15LQ9BU68 103 aa6.03□□□□□ -1.44
CMSS1-201ENST00000421999 A0A1W2PNM2 257 aa6.02□□□□□ -1.45
CMSS1-201ENST00000421999 C8orf17Q9NRJ1 99 aa6□□□□□ -1.45
CMSS1-201ENST00000421999 A0A1B0GVX0 72 aa6□□□□□ -1.45
CMSS1-201ENST00000421999 PRR15Q8IV56 129 aa6□□□□□ -1.45
CMSS1-201ENST00000421999 IGLV7-46A0A075B6I9 117 aa6□□□□□ -1.45
CMSS1-201ENST00000421999 SPRR1AP35321 89 aa5.97□□□□□ -1.45
CMSS1-201ENST00000421999 IGLV5-48A0A075B6I7 105 aa5.96□□□□□ -1.46
CMSS1-201ENST00000421999 FAM229BQ4G0N7 80 aa5.96□□□□□ -1.46
CMSS1-201ENST00000421999 Q5XG85 94 aa5.96□□□□□ -1.46
CMSS1-201ENST00000421999 LINC01600Q96MT4 127 aa5.95□□□□□ -1.46
CMSS1-201ENST00000421999 A6NED7 52 aa5.95□□□□□ -1.46
CMSS1-201ENST00000421999 FBN3Q75N90 2809 aa5.94□□□□□ -1.46
CMSS1-201ENST00000421999 CD164Q04900 197 aa5.93□□□□□ -1.46
CMSS1-201ENST00000421999 LOC101927531A0A1B0GV80 90 aa5.92□□□□□ -1.46
CMSS1-201ENST00000421999 ACYP2P14621 99 aa5.91□□□□□ -1.46
CMSS1-201ENST00000421999 KRTAP7-1Q8IUC3 87 aa5.9□□□□□ -1.46
CMSS1-201ENST00000421999 PSPHP1O15172 72 aa5.9□□□□□ -1.47
CMSS1-201ENST00000421999 Q6ZSA8 131 aa5.9□□□□□ -1.47
CMSS1-201ENST00000421999 H3BPC8 53 aa5.89□□□□□ -1.47
CMSS1-201ENST00000421999 KRTAP11-1Q8IUC1 163 aa5.89□□□□□ -1.47
CMSS1-201ENST00000421999 H7BZZ5 65 aa5.88□□□□□ -1.47
CMSS1-201ENST00000421999 SRRM2Q9UQ35 2752 aaKnown RBP5.88□□□□□ -1.47
CMSS1-201ENST00000421999 RBM12B-AS1Q9P1G2 102 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms