RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 LAMA5O15230 3695 aa6.92□□□□□ -1.3
PTCH1-206ENST00000421141 STAB2Q8WWQ8 2551 aa6.92□□□□□ -1.3
PTCH1-206ENST00000421141 ACYP2P14621 99 aa6.92□□□□□ -1.3
PTCH1-206ENST00000421141 C9orf92A6NGG3 77 aa6.9□□□□□ -1.3
PTCH1-206ENST00000421141 TRAV22A0A0B4J277 110 aa6.9□□□□□ -1.3
PTCH1-206ENST00000421141 LCE6AA0A183 80 aa6.9□□□□□ -1.31
PTCH1-206ENST00000421141 KRTAP21-3Q3LHN1 58 aa6.9□□□□□ -1.31
PTCH1-206ENST00000421141 OBSCN-AS1Q96MR7 158 aa6.9□□□□□ -1.31
PTCH1-206ENST00000421141 IGFL1Q6UW32 110 aa6.89□□□□□ -1.31
PTCH1-206ENST00000421141 SPRR4Q96PI1 79 aa6.89□□□□□ -1.31
PTCH1-206ENST00000421141 TMEM254Q8TBM7 123 aa6.89□□□□□ -1.31
PTCH1-206ENST00000421141 IGLV5-37A0A075B6J1 123 aa6.88□□□□□ -1.31
PTCH1-206ENST00000421141 ANAPC11Q9NYG5 84 aa6.88□□□□□ -1.31
PTCH1-206ENST00000421141 H3BPC8 53 aa6.87□□□□□ -1.31
PTCH1-206ENST00000421141 Q8N377 158 aa6.87□□□□□ -1.31
PTCH1-206ENST00000421141 MRPL34Q9BQ48 92 aaKnown RBP6.86□□□□□ -1.31
PTCH1-206ENST00000421141 RBM12B-AS1Q9P1G2 102 aa6.86□□□□□ -1.31
PTCH1-206ENST00000421141 CCDC179H3BU77 68 aa6.84□□□□□ -1.31
PTCH1-206ENST00000421141 DSCR10P59022 87 aa6.84□□□□□ -1.31
PTCH1-206ENST00000421141 CELSR2Q9HCU4 2923 aa6.83□□□□□ -1.32
PTCH1-206ENST00000421141 LOC101927531A0A1B0GV80 90 aa6.83□□□□□ -1.32
PTCH1-206ENST00000421141 A0A1B0GVX0 72 aa6.83□□□□□ -1.32
PTCH1-206ENST00000421141 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.83□□□□□ -1.32
PTCH1-206ENST00000421141 DMBT1Q9UGM3 2413 aaPredicted RBP6.82□□□□□ -1.32
PTCH1-206ENST00000421141 ZANQ9Y493 2812 aa6.81□□□□□ -1.32
PTCH1-206ENST00000421141 K7EQZ3 153 aa6.81□□□□□ -1.32
PTCH1-206ENST00000421141 PLAC8Q9NZF1 115 aa6.81□□□□□ -1.32
PTCH1-206ENST00000421141 NIPBLQ6KC79 2804 aaeCLIP6.8□□□□□ -1.32
PTCH1-206ENST00000421141 FAM229BQ4G0N7 80 aa6.8□□□□□ -1.32
PTCH1-206ENST00000421141 HRNRQ86YZ3 2850 aaPredicted RBP6.79□□□□□ -1.32
PTCH1-206ENST00000421141 PRR15Q8IV56 129 aa6.79□□□□□ -1.32
PTCH1-206ENST00000421141 CD164Q04900 197 aa6.79□□□□□ -1.32
PTCH1-206ENST00000421141 SMIM26A0A096LP01 95 aa6.79□□□□□ -1.32
PTCH1-206ENST00000421141 MUC3AQ02505 3323 aa6.78□□□□□ -1.32
PTCH1-206ENST00000421141 A0A1B0GU69 56 aa6.78□□□□□ -1.32
PTCH1-206ENST00000421141 C8orf17Q9NRJ1 99 aa6.78□□□□□ -1.32
PTCH1-206ENST00000421141 SMCPP49901 116 aaPredicted RBP6.78□□□□□ -1.32
PTCH1-206ENST00000421141 IGLV7-46A0A075B6I9 117 aa6.77□□□□□ -1.33
PTCH1-206ENST00000421141 Q5VSD8 79 aa6.77□□□□□ -1.33
PTCH1-206ENST00000421141 EIF4EBP3O60516 100 aaPredicted RBP6.77□□□□□ -1.33
PTCH1-206ENST00000421141 ERC2-IT1O76042 136 aa6.77□□□□□ -1.33
PTCH1-206ENST00000421141 C1orf195Q5TG92 126 aa6.77□□□□□ -1.33
PTCH1-206ENST00000421141 PRR26Q8N8Z3 221 aa6.75□□□□□ -1.33
PTCH1-206ENST00000421141 PRO0461Q9UI25 63 aa6.75□□□□□ -1.33
PTCH1-206ENST00000421141 TENM4Q6N022 2769 aa6.75□□□□□ -1.33
PTCH1-206ENST00000421141 Q6ZSA8 131 aa6.74□□□□□ -1.33
PTCH1-206ENST00000421141 PMAIP1Q13794 54 aa6.72□□□□□ -1.33
PTCH1-206ENST00000421141 RELNP78509 3460 aa6.72□□□□□ -1.33
PTCH1-206ENST00000421141 NF1P21359 2839 aa6.71□□□□□ -1.34
PTCH1-206ENST00000421141 A0A0G2JQZ4 141 aa6.71□□□□□ -1.34
PTCH1-206ENST00000421141 PSPHP1O15172 72 aa6.7□□□□□ -1.34
PTCH1-206ENST00000421141 KRTAP1-5Q9BYS1 174 aa6.7□□□□□ -1.34
PTCH1-206ENST00000421141 DCHS1Q96JQ0 3298 aa6.69□□□□□ -1.34
PTCH1-206ENST00000421141 SPINT4Q6UDR6 99 aa6.69□□□□□ -1.34
PTCH1-206ENST00000421141 DCHS2Q6V1P9 2916 aa6.69□□□□□ -1.34
PTCH1-206ENST00000421141 SPENQ96T58 3664 aaKnown RBP6.68□□□□□ -1.34
PTCH1-206ENST00000421141 FBN2P35556 2912 aa6.67□□□□□ -1.34
PTCH1-206ENST00000421141 M0R2T5 61 aa6.67□□□□□ -1.34
PTCH1-206ENST00000421141 IGLV5-48A0A075B6I7 105 aa6.66□□□□□ -1.34
PTCH1-206ENST00000421141 ZFHX3Q15911 3703 aa6.66□□□□□ -1.34
PTCH1-206ENST00000421141 KRTAP10-1P60331 282 aa6.66□□□□□ -1.34
PTCH1-206ENST00000421141 KRTAP10-2P60368 255 aa6.65□□□□□ -1.34
PTCH1-206ENST00000421141 ZFHX4Q86UP3 3567 aa6.63□□□□□ -1.35
PTCH1-206ENST00000421141 IGLV8-61A0A075B6I0 122 aa6.63□□□□□ -1.35
PTCH1-206ENST00000421141 Q6ZR54 194 aa6.62□□□□□ -1.35
PTCH1-206ENST00000421141 CELSR1Q9NYQ6 3014 aa6.62□□□□□ -1.35
PTCH1-206ENST00000421141 A0A1W2PNM2 257 aa6.61□□□□□ -1.35
PTCH1-206ENST00000421141 FAM104AQ969W3 186 aa6.61□□□□□ -1.35
PTCH1-206ENST00000421141 SEC61BP60468 96 aaKnown RBP6.6□□□□□ -1.35
PTCH1-206ENST00000421141 OXTP01178 125 aa6.59□□□□□ -1.35
PTCH1-206ENST00000421141 SPRR1AP35321 89 aa6.57□□□□□ -1.36
PTCH1-206ENST00000421141 TENM1Q9UKZ4 2725 aa6.57□□□□□ -1.36
PTCH1-206ENST00000421141 KRTAP26-1Q6PEX3 210 aa6.56□□□□□ -1.36
PTCH1-206ENST00000421141 SMG1Q96Q15 3661 aaKnown RBP6.55□□□□□ -1.36
PTCH1-206ENST00000421141 COA5Q86WW8 74 aa6.55□□□□□ -1.36
PTCH1-206ENST00000421141 MXRA5Q9NR99 2828 aa6.55□□□□□ -1.36
PTCH1-206ENST00000421141 BSNQ9UPA5 3926 aa6.55□□□□□ -1.36
PTCH1-206ENST00000421141 LINC01600Q96MT4 127 aa6.53□□□□□ -1.36
PTCH1-206ENST00000421141 Q8N1X5 172 aa6.51□□□□□ -1.37
PTCH1-206ENST00000421141 FP248Q71RG6 208 aaPredicted RBP6.5□□□□□ -1.37
PTCH1-206ENST00000421141 A8MUN3 132 aa6.5□□□□□ -1.37
PTCH1-206ENST00000421141 SPRR1BP22528 89 aa6.48□□□□□ -1.37
PTCH1-206ENST00000421141 UQCR11O14957 56 aa6.47□□□□□ -1.37
PTCH1-206ENST00000421141 LINC01554Q52M75 96 aa6.47□□□□□ -1.37
PTCH1-206ENST00000421141 LINC00483Q53H64 154 aa6.47□□□□□ -1.37
PTCH1-206ENST00000421141 ZCCHC13Q8WW36 166 aaKnown RBP6.47□□□□□ -1.37
PTCH1-206ENST00000421141 Q8NDZ9 215 aa6.46□□□□□ -1.38
PTCH1-206ENST00000421141 KLKP1Q107X0 134 aa6.45□□□□□ -1.38
PTCH1-206ENST00000421141 SPANXA2-OT1Q8N9U9 137 aa6.44□□□□□ -1.38
PTCH1-206ENST00000421141 RPS28P62857 69 aaKnown RBP6.43□□□□□ -1.38
PTCH1-206ENST00000421141 Q6ZRN7 208 aaPredicted RBP6.43□□□□□ -1.38
PTCH1-206ENST00000421141 S4R3F8 94 aa6.42□□□□□ -1.38
PTCH1-206ENST00000421141 PANO1I0J062 215 aa6.4□□□□□ -1.38
PTCH1-206ENST00000421141 C4orf26Q17RF5 130 aa6.4□□□□□ -1.39
PTCH1-206ENST00000421141 CSAG1Q6PB30 78 aa6.39□□□□□ -1.39
PTCH1-206ENST00000421141 CSMD1Q96PZ7 3565 aa6.39□□□□□ -1.39
PTCH1-206ENST00000421141 CYP4F30PQ9H0H9 118 aa6.39□□□□□ -1.39
PTCH1-206ENST00000421141 MIR22HGQ0VDD5 57 aa6.38□□□□□ -1.39
PTCH1-206ENST00000421141 HRES1P13985 223 aa6.37□□□□□ -1.39
PTCH1-206ENST00000421141 LINC00472Q9H8W2 130 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms