RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 IGLV5-48A0A075B6I7 105 aa1.59□□□□□ -2.15
VPS41-206ENST00000418457 LCE6AA0A183 80 aa1.59□□□□□ -2.15
VPS41-206ENST00000418457 H3BNG1 76 aa1.59□□□□□ -2.15
VPS41-206ENST00000418457 M0R2N4 97 aa1.59□□□□□ -2.15
VPS41-206ENST00000418457 KRTAP10-8P60410 259 aa1.59□□□□□ -2.15
VPS41-206ENST00000418457 DAD1P61803 113 aa1.59□□□□□ -2.15
VPS41-206ENST00000418457 Q1T7F1 81 aa1.59□□□□□ -2.15
VPS41-206ENST00000418457 CLPSL2Q6UWE3 100 aa1.59□□□□□ -2.15
VPS41-206ENST00000418457 UNQ6190/PRO20217Q6UXQ8 127 aa1.59□□□□□ -2.15
VPS41-206ENST00000418457 PRR15Q8IV56 129 aa1.59□□□□□ -2.15
VPS41-206ENST00000418457 WFDC11Q8NEX6 87 aa1.59□□□□□ -2.15
VPS41-206ENST00000418457 BRK1Q8WUW1 75 aa1.59□□□□□ -2.15
VPS41-206ENST00000418457 KRTAP4-4Q9BYR3 166 aa1.59□□□□□ -2.15
VPS41-206ENST00000418457 CREBBPQ92793 2442 aa1.59□□□□□ -2.16
VPS41-206ENST00000418457 CSPG4Q6UVK1 2322 aa1.58□□□□□ -2.16
VPS41-206ENST00000418457 FBN1P35555 2871 aaKnown RBP1.58□□□□□ -2.16
VPS41-206ENST00000418457 HIVEP1P15822 2718 aa1.58□□□□□ -2.16
VPS41-206ENST00000418457 IGLV10-54A0A075B6I4 117 aa1.58□□□□□ -2.16
VPS41-206ENST00000418457 ETDCA0A1B0GVM5 59 aa1.58□□□□□ -2.16
VPS41-206ENST00000418457 hDV103S1A0JD37 113 aa1.58□□□□□ -2.16
VPS41-206ENST00000418457 H3BPC8 53 aa1.58□□□□□ -2.16
VPS41-206ENST00000418457 SPART-AS1P0CW21 52 aa1.58□□□□□ -2.16
VPS41-206ENST00000418457 UBE2AP49459 152 aa1.58□□□□□ -2.16
VPS41-206ENST00000418457 DEFB116Q30KQ4 102 aa1.58□□□□□ -2.16
VPS41-206ENST00000418457 C9orf116Q5BN46 136 aaPredicted RBP1.58□□□□□ -2.16
VPS41-206ENST00000418457 KPRPQ5T749 579 aaPredicted RBP1.58□□□□□ -2.16
VPS41-206ENST00000418457 KRTAP5-4Q6L8H1 288 aa1.58□□□□□ -2.16
VPS41-206ENST00000418457 Q6ZRU5 148 aa1.58□□□□□ -2.16
VPS41-206ENST00000418457 MRPL55Q7Z7F7 128 aaKnown RBP1.58□□□□□ -2.16
VPS41-206ENST00000418457 Q8NDZ9 215 aa1.58□□□□□ -2.16
VPS41-206ENST00000418457 SPRR4Q96PI1 79 aa1.58□□□□□ -2.16
VPS41-206ENST00000418457 CAMK2N2Q96S95 79 aa1.58□□□□□ -2.16
VPS41-206ENST00000418457 CYP4F30PQ9H0H9 118 aa1.58□□□□□ -2.16
VPS41-206ENST00000418457 C6orf48Q9UBA6 75 aa1.58□□□□□ -2.16
VPS41-206ENST00000418457 PKIGQ9Y2B9 76 aa1.58□□□□□ -2.16
VPS41-206ENST00000418457 NBASA2RRP1 2371 aa1.57□□□□□ -2.16
VPS41-206ENST00000418457 DOPEY1Q5JWR5 2465 aa1.57□□□□□ -2.16
VPS41-206ENST00000418457 TLX1NBP0CAT3 122 aa1.57□□□□□ -2.16
VPS41-206ENST00000418457 MP68P56378 58 aa1.57□□□□□ -2.16
VPS41-206ENST00000418457 PMAIP1Q13794 54 aa1.57□□□□□ -2.16
VPS41-206ENST00000418457 SCXQ7RTU7 201 aa1.57□□□□□ -2.16
VPS41-206ENST00000418457 SPANXA2-OT1Q8N9U9 137 aa1.57□□□□□ -2.16
VPS41-206ENST00000418457 ZCCHC13Q8WW36 166 aaKnown RBP1.57□□□□□ -2.16
VPS41-206ENST00000418457 HIGD2AQ9BW72 106 aa1.57□□□□□ -2.16
VPS41-206ENST00000418457 WFDC10AQ9H1F0 79 aa1.57□□□□□ -2.16
VPS41-206ENST00000418457 KCNQ1DNQ9H478 68 aa1.57□□□□□ -2.16
VPS41-206ENST00000418457 LINC00474Q9P2X8 69 aa1.57□□□□□ -2.16
VPS41-206ENST00000418457 A0A096LPF7 62 aa1.56□□□□□ -2.16
VPS41-206ENST00000418457 HCG22E2RYF7 251 aa1.56□□□□□ -2.16
VPS41-206ENST00000418457 UBE2BP63146 152 aa1.56□□□□□ -2.16
VPS41-206ENST00000418457 SYCNQ0VAF6 134 aa1.56□□□□□ -2.16
VPS41-206ENST00000418457 FAM229BQ4G0N7 80 aa1.56□□□□□ -2.16
VPS41-206ENST00000418457 C1orf137Q5JT78 98 aa1.56□□□□□ -2.16
VPS41-206ENST00000418457 Q6ZRX8 168 aa1.56□□□□□ -2.16
VPS41-206ENST00000418457 Q8NAQ8 132 aa1.56□□□□□ -2.16
VPS41-206ENST00000418457 C1orf64Q8NEQ6 169 aa1.56□□□□□ -2.16
VPS41-206ENST00000418457 Q9BRP9 147 aa1.56□□□□□ -2.16
VPS41-206ENST00000418457 LIMD2Q9BT23 127 aa1.56□□□□□ -2.16
VPS41-206ENST00000418457 XAGE1AQ9HD64 81 aa1.56□□□□□ -2.16
VPS41-206ENST00000418457 SVEP1Q4LDE5 3571 aa1.55□□□□□ -2.16
VPS41-206ENST00000418457 MEGF8Q7Z7M0 2845 aa1.55□□□□□ -2.16
VPS41-206ENST00000418457 OBSCNQ5VST9 7968 aa1.55□□□□□ -2.16
VPS41-206ENST00000418457 WNK1Q9H4A3 2382 aa1.55□□□□□ -2.16
VPS41-206ENST00000418457 IGLV1-50A0A075B6I6 118 aa1.55□□□□□ -2.16
VPS41-206ENST00000418457 TRAV22A0A0B4J277 110 aa1.55□□□□□ -2.16
VPS41-206ENST00000418457 C3orf84H3BNL1 204 aa1.55□□□□□ -2.16
VPS41-206ENST00000418457 SPRR1AP35321 89 aa1.55□□□□□ -2.16
VPS41-206ENST00000418457 DEFB135Q30KP9 77 aa1.55□□□□□ -2.16
VPS41-206ENST00000418457 LINC01556Q5JQF7 62 aa1.55□□□□□ -2.16
VPS41-206ENST00000418457 KRTAP26-1Q6PEX3 210 aa1.55□□□□□ -2.16
VPS41-206ENST00000418457 C15orf56Q8N910 161 aa1.55□□□□□ -2.16
VPS41-206ENST00000418457 NIPBLQ6KC79 2804 aaeCLIP1.54□□□□□ -2.16
VPS41-206ENST00000418457 C2CD3Q4AC94 2353 aa1.54□□□□□ -2.16
VPS41-206ENST00000418457 NOTCH2Q04721 2471 aa1.54□□□□□ -2.16
VPS41-206ENST00000418457 A0A1W2PNM2 257 aa1.54□□□□□ -2.16
VPS41-206ENST00000418457 LRCOL1A6NCL2 159 aa1.54□□□□□ -2.16
VPS41-206ENST00000418457 PSCAO43653 123 aa1.54□□□□□ -2.16
VPS41-206ENST00000418457 NDUFS5O43920 106 aa1.54□□□□□ -2.16
VPS41-206ENST00000418457 KRTAP21-3Q3LHN1 58 aa1.54□□□□□ -2.16
VPS41-206ENST00000418457 LINC00483Q53H64 154 aa1.54□□□□□ -2.16
VPS41-206ENST00000418457 DEFB105AQ8NG35 78 aa1.54□□□□□ -2.16
VPS41-206ENST00000418457 SMR3AQ99954 134 aa1.54□□□□□ -2.16
VPS41-206ENST00000418457 B9D2Q9BPU9 175 aa1.54□□□□□ -2.16
VPS41-206ENST00000418457 TLN2Q9Y4G6 2542 aa1.54□□□□□ -2.16
VPS41-206ENST00000418457 POLQO75417 2590 aa1.53□□□□□ -2.16
VPS41-206ENST00000418457 SETD2Q9BYW2 2564 aaPredicted RBP1.53□□□□□ -2.16
VPS41-206ENST00000418457 ITPR3Q14573 2671 aa1.53□□□□□ -2.16
VPS41-206ENST00000418457 C8orf87E5RJ46 101 aa1.53□□□□□ -2.16
VPS41-206ENST00000418457 K7EQZ3 153 aa1.53□□□□□ -2.16
VPS41-206ENST00000418457 HTN3P15516 51 aa1.53□□□□□ -2.16
VPS41-206ENST00000418457 ATP11AUNQ6ZP68 121 aa1.53□□□□□ -2.16
VPS41-206ENST00000418457 SPG11Q96JI7 2443 aa1.53□□□□□ -2.16
VPS41-206ENST00000418457 LINC00208Q96KT6 92 aa1.53□□□□□ -2.16
VPS41-206ENST00000418457 LCE3DQ9BYE3 92 aa1.53□□□□□ -2.16
VPS41-206ENST00000418457 LINC00588Q9Y4M8 146 aa1.53□□□□□ -2.16
VPS41-206ENST00000418457 CMYA5Q8N3K9 4069 aa1.53□□□□□ -2.17
VPS41-206ENST00000418457 RYR3Q15413 4870 aa1.52□□□□□ -2.17
VPS41-206ENST00000418457 F8P00451 2351 aa1.52□□□□□ -2.17
VPS41-206ENST00000418457 MAP1AP78559 2803 aaPredicted RBP1.52□□□□□ -2.17
VPS41-206ENST00000418457 LOC101927531A0A1B0GV80 90 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms