RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 COL5A1-AS1Q5SY13 56 aa2.87□□□□□ -1.95
VPS41-205ENST00000414632 SPANXB1Q9NS25 103 aaPredicted RBP2.87□□□□□ -1.95
VPS41-205ENST00000414632 LRP2P98164 4655 aa2.86□□□□□ -1.95
VPS41-205ENST00000414632 TRAV23DV6A0A075B6W5 121 aa2.86□□□□□ -1.95
VPS41-205ENST00000414632 LOC107984156A0A0G2JMH3 177 aa2.86□□□□□ -1.95
VPS41-205ENST00000414632 TRBV10-2A0A0K0K1G8 114 aa2.86□□□□□ -1.95
VPS41-205ENST00000414632 KRTAP4-16G5E9R7 235 aaPredicted RBP2.86□□□□□ -1.95
VPS41-205ENST00000414632 TIMM17BO60830 172 aa2.86□□□□□ -1.95
VPS41-205ENST00000414632 NDUFC2O95298 119 aa2.86□□□□□ -1.95
VPS41-205ENST00000414632 KRTAP13-2Q52LG2 175 aa2.86□□□□□ -1.95
VPS41-205ENST00000414632 ARL17AQ8IVW1 177 aa2.86□□□□□ -1.95
VPS41-205ENST00000414632 OR13C6PQ8NH95 151 aa2.86□□□□□ -1.95
VPS41-205ENST00000414632 SMCR5Q8TEV8 140 aa2.86□□□□□ -1.95
VPS41-205ENST00000414632 KCNQ1DNQ9H478 68 aa2.86□□□□□ -1.95
VPS41-205ENST00000414632 ERC2-IT1O76042 136 aa2.85□□□□□ -1.95
VPS41-205ENST00000414632 IGLV6-57P01721 117 aa2.85□□□□□ -1.95
VPS41-205ENST00000414632 CRYGAP11844 174 aa2.85□□□□□ -1.95
VPS41-205ENST00000414632 SPRR1AP35321 89 aa2.85□□□□□ -1.95
VPS41-205ENST00000414632 MUSTN1Q8IVN3 82 aa2.85□□□□□ -1.95
VPS41-205ENST00000414632 C3orf22Q8N5N4 141 aa2.85□□□□□ -1.95
VPS41-205ENST00000414632 LINC00337Q8N6G1 96 aa2.85□□□□□ -1.95
VPS41-205ENST00000414632 SPRR4Q96PI1 79 aa2.85□□□□□ -1.95
VPS41-205ENST00000414632 SPANXDQ9BXN6 97 aa2.85□□□□□ -1.95
VPS41-205ENST00000414632 SPANXCQ9NY87 97 aa2.85□□□□□ -1.95
VPS41-205ENST00000414632 ZNF73O43830 326 aaPredicted RBP2.84□□□□□ -1.95
VPS41-205ENST00000414632 Q9BRP9 147 aa2.84□□□□□ -1.95
VPS41-205ENST00000414632 KRTAP2-2Q9BYT5 123 aa2.84□□□□□ -1.95
VPS41-205ENST00000414632 A6NDN8 102 aa2.83□□□□□ -1.96
VPS41-205ENST00000414632 TAX1BP3O14907 124 aa2.83□□□□□ -1.96
VPS41-205ENST00000414632 DSCR10P59022 87 aa2.83□□□□□ -1.96
VPS41-205ENST00000414632 FAM229BQ4G0N7 80 aa2.83□□□□□ -1.96
VPS41-205ENST00000414632 Q6ZRX8 168 aa2.83□□□□□ -1.96
VPS41-205ENST00000414632 ST20-AS1Q8NBB2 130 aa2.83□□□□□ -1.96
VPS41-205ENST00000414632 RETNLBQ9BQ08 111 aa2.83□□□□□ -1.96
VPS41-205ENST00000414632 IFITM1P13164 125 aa2.82□□□□□ -1.96
VPS41-205ENST00000414632 HINT1P49773 126 aaPredicted RBP2.82□□□□□ -1.96
VPS41-205ENST00000414632 C6orf99Q4VX62 202 aa2.82□□□□□ -1.96
VPS41-205ENST00000414632 SPATA45Q537H7 98 aa2.82□□□□□ -1.96
VPS41-205ENST00000414632 LINC00304Q8N9R0 145 aa2.82□□□□□ -1.96
VPS41-205ENST00000414632 VAMP8Q9BV40 100 aa2.82□□□□□ -1.96
VPS41-205ENST00000414632 ZNF706Q9Y5V0 76 aaPredicted RBP2.82□□□□□ -1.96
VPS41-205ENST00000414632 A0A1B0GV72 72 aa2.81□□□□□ -1.96
VPS41-205ENST00000414632 COX8AP10176 69 aa2.81□□□□□ -1.96
VPS41-205ENST00000414632 SCGB1A1P11684 91 aa2.81□□□□□ -1.96
VPS41-205ENST00000414632 COX7BP24311 80 aa2.81□□□□□ -1.96
VPS41-205ENST00000414632 MOBPQ13875 183 aa2.81□□□□□ -1.96
VPS41-205ENST00000414632 UQCR10Q9UDW1 63 aa2.81□□□□□ -1.96
VPS41-205ENST00000414632 SS18L2Q9UHA2 77 aa2.81□□□□□ -1.96
VPS41-205ENST00000414632 K7ERU9 68 aa2.8□□□□□ -1.96
VPS41-205ENST00000414632 ELOF1P60002 83 aaKnown RBP2.8□□□□□ -1.96
VPS41-205ENST00000414632 VAMP3Q15836 100 aa2.8□□□□□ -1.96
VPS41-205ENST00000414632 LINC00483Q53H64 154 aa2.8□□□□□ -1.96
VPS41-205ENST00000414632 C9orf153Q5TBE3 101 aa2.8□□□□□ -1.96
VPS41-205ENST00000414632 DEFB105AQ8NG35 78 aa2.8□□□□□ -1.96
VPS41-205ENST00000414632 COPS9Q8WXC6 57 aa2.8□□□□□ -1.96
VPS41-205ENST00000414632 TRAV13-2A0A0B4J235 113 aa2.79□□□□□ -1.96
VPS41-205ENST00000414632 H7C2G1 150 aa2.79□□□□□ -1.96
VPS41-205ENST00000414632 C2orf91Q6ZV80 131 aa2.79□□□□□ -1.96
VPS41-205ENST00000414632 SMIM11BQ8TCY0 68 aa2.79□□□□□ -1.96
VPS41-205ENST00000414632 RNF213Q63HN8 5207 aa2.79□□□□□ -1.96
VPS41-205ENST00000414632 BVES-AS1Q5T3Y7 98 aa2.78□□□□□ -1.96
VPS41-205ENST00000414632 SLC25A34Q6PIV7 304 aa2.78□□□□□ -1.96
VPS41-205ENST00000414632 HRCT1Q6UXD1 115 aa2.78□□□□□ -1.96
VPS41-205ENST00000414632 MUC2Q02817 5179 aa2.77□□□□□ -1.97
VPS41-205ENST00000414632 K7EP34 96 aa2.77□□□□□ -1.97
VPS41-205ENST00000414632 TAL2Q16559 108 aa2.77□□□□□ -1.97
VPS41-205ENST00000414632 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
VPS41-205ENST00000414632 A0A0G2JQZ4 141 aa2.76□□□□□ -1.97
VPS41-205ENST00000414632 TRBV7-6A0A0J9YX20 115 aa2.76□□□□□ -1.97
VPS41-205ENST00000414632 RAB37Q96AX2 223 aa2.76□□□□□ -1.97
VPS41-205ENST00000414632 SIGMAR1Q99720 223 aa2.76□□□□□ -1.97
VPS41-205ENST00000414632 NAA38Q9BRA0 125 aaKnown RBP2.76□□□□□ -1.97
VPS41-205ENST00000414632 HIGD1BQ9P298 99 aa2.76□□□□□ -1.97
VPS41-205ENST00000414632 MUC17Q685J3 4493 aa2.76□□□□□ -1.97
VPS41-205ENST00000414632 TEX49A0A1B0GTD5 131 aa2.75□□□□□ -1.97
VPS41-205ENST00000414632 SPRR1BP22528 89 aa2.75□□□□□ -1.97
VPS41-205ENST00000414632 FXYD2P54710 66 aa2.75□□□□□ -1.97
VPS41-205ENST00000414632 HSD52Q0P140 79 aa2.75□□□□□ -1.97
VPS41-205ENST00000414632 LCE1FQ5T754 118 aa2.75□□□□□ -1.97
VPS41-205ENST00000414632 SPAG11AQ6PDA7 123 aa2.75□□□□□ -1.97
VPS41-205ENST00000414632 LINC00575Q6W349 94 aa2.75□□□□□ -1.97
VPS41-205ENST00000414632 SSBP3-AS1Q7Z2R9 100 aa2.75□□□□□ -1.97
VPS41-205ENST00000414632 LAMTOR3Q9UHA4 124 aa2.75□□□□□ -1.97
VPS41-205ENST00000414632 IGLV5-48A0A075B6I7 105 aa2.74□□□□□ -1.97
VPS41-205ENST00000414632 K7ERJ3 54 aa2.74□□□□□ -1.97
VPS41-205ENST00000414632 SLC25A20O43772 301 aa2.74□□□□□ -1.97
VPS41-205ENST00000414632 SPINK1P00995 79 aa2.74□□□□□ -1.97
VPS41-205ENST00000414632 Q6ZQY7 126 aa2.74□□□□□ -1.97
VPS41-205ENST00000414632 SMIM20Q8N5G0 67 aa2.74□□□□□ -1.97
VPS41-205ENST00000414632 NHP2Q9NX24 153 aaKnown RBP2.74□□□□□ -1.97
VPS41-205ENST00000414632 FSIP2Q5CZC0 6907 aa2.74□□□□□ -1.97
VPS41-205ENST00000414632 A0A0B4J2C4 111 aa2.73□□□□□ -1.97
VPS41-205ENST00000414632 hADV29S1A0JD25 119 aa2.73□□□□□ -1.97
VPS41-205ENST00000414632 FAT4Q6V0I7 4981 aa2.73□□□□□ -1.97
VPS41-205ENST00000414632 MT-ATP8P03928 68 aa2.72□□□□□ -1.97
VPS41-205ENST00000414632 CAMK2N1Q7Z7J9 78 aa2.72□□□□□ -1.97
VPS41-205ENST00000414632 PRO1854Q9UHT4 67 aa2.72□□□□□ -1.97
VPS41-205ENST00000414632 F8WEM9 126 aa2.71□□□□□ -1.98
VPS41-205ENST00000414632 CCDC179H3BU77 68 aa2.71□□□□□ -1.98
VPS41-205ENST00000414632 H3BUT2 72 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms