RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 CFC1BP0CG36 223 aa6.23□□□□□ -1.41
RFFL-204ENST00000414419 CFC1P0CG37 223 aa6.23□□□□□ -1.41
RFFL-204ENST00000414419 SEC61BP60468 96 aaKnown RBP6.23□□□□□ -1.41
RFFL-204ENST00000414419 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.23□□□□□ -1.41
RFFL-204ENST00000414419 A0A0B4J2C4 111 aa6.22□□□□□ -1.41
RFFL-204ENST00000414419 A0A0G2JQZ4 141 aa6.22□□□□□ -1.41
RFFL-204ENST00000414419 TMEM238LA0A1B0GVL6 79 aa6.22□□□□□ -1.41
RFFL-204ENST00000414419 A6NJY4 79 aa6.22□□□□□ -1.41
RFFL-204ENST00000414419 MUC2Q02817 5179 aa6.21□□□□□ -1.42
RFFL-204ENST00000414419 ASB16-AS1Q495Z4 193 aa6.21□□□□□ -1.42
RFFL-204ENST00000414419 Q5XG85 94 aa6.21□□□□□ -1.42
RFFL-204ENST00000414419 C2orf91Q6ZV80 131 aa6.21□□□□□ -1.42
RFFL-204ENST00000414419 CEND1Q8N111 149 aa6.21□□□□□ -1.42
RFFL-204ENST00000414419 SNHG12Q9BXW3 62 aa6.21□□□□□ -1.42
RFFL-204ENST00000414419 TSTD3H0UI37 97 aa6.2□□□□□ -1.42
RFFL-204ENST00000414419 H0YGX0 51 aa6.2□□□□□ -1.42
RFFL-204ENST00000414419 TCL1BO95988 128 aa6.2□□□□□ -1.42
RFFL-204ENST00000414419 Q6JHZ5 121 aa6.2□□□□□ -1.42
RFFL-204ENST00000414419 PPDPFLQ8WWR9 84 aa6.2□□□□□ -1.42
RFFL-204ENST00000414419 C9orf92A6NGG3 77 aa6.18□□□□□ -1.42
RFFL-204ENST00000414419 OCIAD2Q56VL3 154 aa6.18□□□□□ -1.42
RFFL-204ENST00000414419 XP32Q5T750 250 aa6.18□□□□□ -1.42
RFFL-204ENST00000414419 PRO1854Q9UHT4 67 aa6.18□□□□□ -1.42
RFFL-204ENST00000414419 A0A1B0GV90 55 aa6.17□□□□□ -1.42
RFFL-204ENST00000414419 C1orf195Q5TG92 126 aa6.17□□□□□ -1.42
RFFL-204ENST00000414419 CLEC2BQ92478 149 aa6.17□□□□□ -1.42
RFFL-204ENST00000414419 MUC17Q685J3 4493 aa6.16□□□□□ -1.42
RFFL-204ENST00000414419 IGLV8-61A0A075B6I0 122 aa6.16□□□□□ -1.42
RFFL-204ENST00000414419 GHRHP01286 108 aa6.16□□□□□ -1.42
RFFL-204ENST00000414419 IGFL1Q6UW32 110 aa6.16□□□□□ -1.42
RFFL-204ENST00000414419 FXYD2P54710 66 aa6.15□□□□□ -1.42
RFFL-204ENST00000414419 TRBV7-7A0A0K0K1E9 115 aa6.14□□□□□ -1.43
RFFL-204ENST00000414419 HSD52Q0P140 79 aa6.14□□□□□ -1.43
RFFL-204ENST00000414419 A0A1B0GX51 115 aa6.13□□□□□ -1.43
RFFL-204ENST00000414419 FAM218AQ96MZ4 157 aa6.13□□□□□ -1.43
RFFL-204ENST00000414419 H3BUT2 72 aa6.12□□□□□ -1.43
RFFL-204ENST00000414419 PSMB2P49721 201 aa6.12□□□□□ -1.43
RFFL-204ENST00000414419 UQCR10Q9UDW1 63 aa6.12□□□□□ -1.43
RFFL-204ENST00000414419 TRIAP1O43715 76 aa6.11□□□□□ -1.43
RFFL-204ENST00000414419 COX6CP09669 75 aa6.11□□□□□ -1.43
RFFL-204ENST00000414419 FABP2P12104 132 aa6.11□□□□□ -1.43
RFFL-204ENST00000414419 NDUFV3P56181 108 aaKnown RBP6.11□□□□□ -1.43
RFFL-204ENST00000414419 DNAL4O96015 105 aa6.1□□□□□ -1.43
RFFL-204ENST00000414419 PCOTHQ58A44 107 aa6.09□□□□□ -1.43
RFFL-204ENST00000414419 H3BMG7 143 aa6.08□□□□□ -1.44
RFFL-204ENST00000414419 K7ERJ3 54 aa6.08□□□□□ -1.44
RFFL-204ENST00000414419 M0R143 59 aa6.08□□□□□ -1.44
RFFL-204ENST00000414419 LST1O00453 97 aa6.08□□□□□ -1.44
RFFL-204ENST00000414419 KRTAP4-1Q9BYQ7 146 aa6.08□□□□□ -1.44
RFFL-204ENST00000414419 SS18L2Q9UHA2 77 aa6.08□□□□□ -1.44
RFFL-204ENST00000414419 TEN1Q86WV5 123 aa6.07□□□□□ -1.44
RFFL-204ENST00000414419 ORMDL1Q9P0S3 153 aa6.07□□□□□ -1.44
RFFL-204ENST00000414419 H3BQ85 93 aa6.06□□□□□ -1.44
RFFL-204ENST00000414419 LCE2AQ5TA79 106 aaPredicted RBP6.06□□□□□ -1.44
RFFL-204ENST00000414419 Q6Q795 121 aa6.06□□□□□ -1.44
RFFL-204ENST00000414419 FAT4Q6V0I7 4981 aa6.04□□□□□ -1.44
RFFL-204ENST00000414419 SCGB1C2P0DMR2 95 aa6.04□□□□□ -1.44
RFFL-204ENST00000414419 RPL37P61927 97 aaKnown RBP6.04□□□□□ -1.44
RFFL-204ENST00000414419 TMEM256-PLSCR3K7ERE1 68 aa6.03□□□□□ -1.44
RFFL-204ENST00000414419 A0A087WSZ3 146 aa6.02□□□□□ -1.45
RFFL-204ENST00000414419 ANKRD29Q8N6D5 301 aa6.02□□□□□ -1.45
RFFL-204ENST00000414419 A0A1B0GV72 72 aa6.01□□□□□ -1.45
RFFL-204ENST00000414419 OBSCN-AS1Q96MR7 158 aa6.01□□□□□ -1.45
RFFL-204ENST00000414419 TRACP01848 142 aa5.99□□□□□ -1.45
RFFL-204ENST00000414419 A0A1W2PNM2 257 aa5.98□□□□□ -1.45
RFFL-204ENST00000414419 UBE2V1Q13404 147 aa5.98□□□□□ -1.45
RFFL-204ENST00000414419 COL5A1-AS1Q5SY13 56 aa5.98□□□□□ -1.45
RFFL-204ENST00000414419 ATP11AUNQ6ZP68 121 aa5.98□□□□□ -1.45
RFFL-204ENST00000414419 Q96NJ1 140 aa5.98□□□□□ -1.45
RFFL-204ENST00000414419 TRBV7-4A0A0J9YYF1 115 aa5.97□□□□□ -1.45
RFFL-204ENST00000414419 CCKP06307 115 aa5.96□□□□□ -1.46
RFFL-204ENST00000414419 Q75L30 129 aa5.96□□□□□ -1.46
RFFL-204ENST00000414419 SIGMAR1Q99720 223 aa5.95□□□□□ -1.46
RFFL-204ENST00000414419 RBM3P98179 157 aaKnown RBP5.94□□□□□ -1.46
RFFL-204ENST00000414419 IGKV4-1P06312 121 aa5.93□□□□□ -1.46
RFFL-204ENST00000414419 BAALC-AS2P0C853 105 aa5.93□□□□□ -1.46
RFFL-204ENST00000414419 DSCR8Q96T75 97 aa5.93□□□□□ -1.46
RFFL-204ENST00000414419 VPS25Q9BRG1 176 aa5.93□□□□□ -1.46
RFFL-204ENST00000414419 ATXN8Q156A1 80 aa5.92□□□□□ -1.46
RFFL-204ENST00000414419 PCP4P48539 62 aa5.91□□□□□ -1.46
RFFL-204ENST00000414419 COX6B2Q6YFQ2 88 aa5.91□□□□□ -1.46
RFFL-204ENST00000414419 C9JAW5 83 aa5.9□□□□□ -1.46
RFFL-204ENST00000414419 DSCR10P59022 87 aa5.9□□□□□ -1.46
RFFL-204ENST00000414419 LINC00313P59037 77 aa5.9□□□□□ -1.46
RFFL-204ENST00000414419 LCE2CQ5TA81 110 aa5.9□□□□□ -1.46
RFFL-204ENST00000414419 NAA38Q9BRA0 125 aaKnown RBP5.9□□□□□ -1.46
RFFL-204ENST00000414419 KRTAP9-2Q9BYQ4 174 aa5.9□□□□□ -1.46
RFFL-204ENST00000414419 DEFB116Q30KQ4 102 aa5.89□□□□□ -1.47
RFFL-204ENST00000414419 KRTAP19-2Q3LHN2 52 aa5.89□□□□□ -1.47
RFFL-204ENST00000414419 C20orf166-AS1Q96NR2 134 aa5.89□□□□□ -1.47
RFFL-204ENST00000414419 A8MUU9 505 aa5.88□□□□□ -1.47
RFFL-204ENST00000414419 C21orf62-AS1Q17RA5 79 aa5.88□□□□□ -1.47
RFFL-204ENST00000414419 LYRM7Q5U5X0 104 aa5.88□□□□□ -1.47
RFFL-204ENST00000414419 JMJD7-PLA2G4BH0Y9G9 81 aa5.87□□□□□ -1.47
RFFL-204ENST00000414419 BATFQ16520 125 aa5.87□□□□□ -1.47
RFFL-204ENST00000414419 LINC00472Q9H8W2 130 aa5.87□□□□□ -1.47
RFFL-204ENST00000414419 MT1HP80294 61 aa5.86□□□□□ -1.47
RFFL-204ENST00000414419 IGHV6-1A0A0B4J1U7 121 aa5.85□□□□□ -1.47
RFFL-204ENST00000414419 M0R2T5 61 aa5.84□□□□□ -1.47
RFFL-204ENST00000414419 TRBV20-1A0A075B6N2 111 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 166.9 ms