RNA–Protein interactions for RNA: ENST00000413409.6

PTPRC-206, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-206ENST00000413409 PDE6GP18545 87 aa10.79□□□□□ -0.68
PTPRC-206ENST00000413409 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.78□□□□□ -0.68
PTPRC-206ENST00000413409 C9orf163Q8N9P6 203 aa10.78□□□□□ -0.68
PTPRC-206ENST00000413409 RPL37AP8A6NKH3 93 aa10.77□□□□□ -0.69
PTPRC-206ENST00000413409 Q6ZQT0 140 aa10.77□□□□□ -0.69
PTPRC-206ENST00000413409 A0A1B0GV72 72 aa10.76□□□□□ -0.69
PTPRC-206ENST00000413409 IMUPQ9GZP8 106 aa10.76□□□□□ -0.69
PTPRC-206ENST00000413409 FAM30AQ9NZY2 134 aa10.76□□□□□ -0.69
PTPRC-206ENST00000413409 IGKV2-24A0A0C4DH68 120 aa10.75□□□□□ -0.69
PTPRC-206ENST00000413409 PLA2G1BP04054 148 aaKnown RBP10.74□□□□□ -0.69
PTPRC-206ENST00000413409 REG3GQ6UW15 175 aa10.74□□□□□ -0.69
PTPRC-206ENST00000413409 DSCR8Q96T75 97 aa10.74□□□□□ -0.69
PTPRC-206ENST00000413409 LINC00846Q9NV44 126 aa10.74□□□□□ -0.69
PTPRC-206ENST00000413409 LINC00474Q9P2X8 69 aa10.74□□□□□ -0.69
PTPRC-206ENST00000413409 NDUFV3P56181 108 aaKnown RBP10.73□□□□□ -0.69
PTPRC-206ENST00000413409 Q6JHZ5 121 aa10.73□□□□□ -0.69
PTPRC-206ENST00000413409 PKHD1L1Q86WI1 4243 aa10.73□□□□□ -0.69
PTPRC-206ENST00000413409 TRBV7-4A0A0J9YYF1 115 aa10.72□□□□□ -0.69
PTPRC-206ENST00000413409 A0A1W2PNN7 141 aa10.72□□□□□ -0.69
PTPRC-206ENST00000413409 Q9BRP9 147 aa10.72□□□□□ -0.69
PTPRC-206ENST00000413409 OXTP01178 125 aa10.7□□□□□ -0.7
PTPRC-206ENST00000413409 IGLV5-48A0A075B6I7 105 aa10.69□□□□□ -0.7
PTPRC-206ENST00000413409 LINC01547P58512 204 aaPredicted RBP10.69□□□□□ -0.7
PTPRC-206ENST00000413409 ATP5EP2Q5VTU8 51 aa10.69□□□□□ -0.7
PTPRC-206ENST00000413409 KRTAP10-4P60372 401 aaPredicted RBP10.67□□□□□ -0.7
PTPRC-206ENST00000413409 Q8N377 158 aa10.67□□□□□ -0.7
PTPRC-206ENST00000413409 IGLV5-52A0A0A0MRZ9 124 aa10.66□□□□□ -0.7
PTPRC-206ENST00000413409 CHTF8P0CG12 524 aa10.66□□□□□ -0.7
PTPRC-206ENST00000413409 UBE2BP63146 152 aa10.65□□□□□ -0.7
PTPRC-206ENST00000413409 UBL5Q9BZL1 73 aa10.65□□□□□ -0.7
PTPRC-206ENST00000413409 H0Y9J4 135 aa10.62□□□□□ -0.71
PTPRC-206ENST00000413409 SPACA4Q8TDM5 124 aa10.62□□□□□ -0.71
PTPRC-206ENST00000413409 TNXBP22105 4242 aa10.62□□□□□ -0.71
PTPRC-206ENST00000413409 PHF5AQ7RTV0 110 aaKnown RBP10.61□□□□□ -0.71
PTPRC-206ENST00000413409 FAM19A1Q7Z5A9 133 aa10.61□□□□□ -0.71
PTPRC-206ENST00000413409 ERC2-IT1O76042 136 aa10.6□□□□□ -0.71
PTPRC-206ENST00000413409 Q6ZSA8 131 aa10.59□□□□□ -0.71
PTPRC-206ENST00000413409 ST20-AS1Q8NBB2 130 aa10.59□□□□□ -0.71
PTPRC-206ENST00000413409 DEFB105AQ8NG35 78 aa10.59□□□□□ -0.71
PTPRC-206ENST00000413409 ANAPC13Q9BS18 74 aa10.59□□□□□ -0.71
PTPRC-206ENST00000413409 IGKV3D-7A0A0C4DH55 119 aa10.58□□□□□ -0.72
PTPRC-206ENST00000413409 A0A1B0GW54 56 aa10.57□□□□□ -0.72
PTPRC-206ENST00000413409 PANO1I0J062 215 aa10.57□□□□□ -0.72
PTPRC-206ENST00000413409 FAM236AA0A1B0GUQ0 79 aa10.56□□□□□ -0.72
PTPRC-206ENST00000413409 FAM236BA0A1B0GV22 79 aa10.56□□□□□ -0.72
PTPRC-206ENST00000413409 PRLHP81277 87 aa10.56□□□□□ -0.72
PTPRC-206ENST00000413409 Q6ZVQ6 151 aa10.56□□□□□ -0.72
PTPRC-206ENST00000413409 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.56□□□□□ -0.72
PTPRC-206ENST00000413409 HIST1H4AP62805 103 aaKnown RBP10.55□□□□□ -0.72
PTPRC-206ENST00000413409 KRTAP11-1Q8IUC1 163 aa10.55□□□□□ -0.72
PTPRC-206ENST00000413409 BCE1O60756 84 aa10.54□□□□□ -0.72
PTPRC-206ENST00000413409 MT1HL1P0DM35 61 aa10.54□□□□□ -0.72
PTPRC-206ENST00000413409 SMIM29Q86T20 159 aa10.52□□□□□ -0.73
PTPRC-206ENST00000413409 C3orf22Q8N5N4 141 aa10.52□□□□□ -0.73
PTPRC-206ENST00000413409 HIGD2AQ9BW72 106 aa10.52□□□□□ -0.73
PTPRC-206ENST00000413409 KRTAP9-2Q9BYQ4 174 aa10.52□□□□□ -0.73
PTPRC-206ENST00000413409 F8WEM9 126 aa10.51□□□□□ -0.73
PTPRC-206ENST00000413409 SPRR1BP22528 89 aa10.51□□□□□ -0.73
PTPRC-206ENST00000413409 CXCL6P80162 114 aa10.51□□□□□ -0.73
PTPRC-206ENST00000413409 C1orf137Q5JT78 98 aa10.51□□□□□ -0.73
PTPRC-206ENST00000413409 KRTAP13-1Q8IUC0 172 aa10.51□□□□□ -0.73
PTPRC-206ENST00000413409 UBE2AP49459 152 aa10.5□□□□□ -0.73
PTPRC-206ENST00000413409 SCXQ7RTU7 201 aa10.5□□□□□ -0.73
PTPRC-206ENST00000413409 PLAC8Q9NZF1 115 aa10.5□□□□□ -0.73
PTPRC-206ENST00000413409 IGLV8-61A0A075B6I0 122 aa10.49□□□□□ -0.73
PTPRC-206ENST00000413409 Q8NBF4 154 aa10.49□□□□□ -0.73
PTPRC-206ENST00000413409 DPH3Q96FX2 82 aa10.48□□□□□ -0.73
PTPRC-206ENST00000413409 ATOX1O00244 68 aa10.47□□□□□ -0.73
PTPRC-206ENST00000413409 A0A1W2PNM2 257 aa10.46□□□□□ -0.73
PTPRC-206ENST00000413409 SPRR4Q96PI1 79 aa10.46□□□□□ -0.73
PTPRC-206ENST00000413409 A0A087WVE0 104 aa10.43□□□□□ -0.74
PTPRC-206ENST00000413409 NREPQ16612 68 aa10.41□□□□□ -0.74
PTPRC-206ENST00000413409 CIRBP-AS1Q8TBR5 109 aa10.41□□□□□ -0.74
PTPRC-206ENST00000413409 KRTAP9-6A0A140TA67 174 aa10.4□□□□□ -0.74
PTPRC-206ENST00000413409 CRYGAP11844 174 aa10.4□□□□□ -0.74
PTPRC-206ENST00000413409 IGFL1Q6UW32 110 aa10.39□□□□□ -0.75
PTPRC-206ENST00000413409 PSORS1C2Q9UIG4 136 aa10.36□□□□□ -0.75
PTPRC-206ENST00000413409 ZNF706Q9Y5V0 76 aaPredicted RBP10.36□□□□□ -0.75
PTPRC-206ENST00000413409 FAT4Q6V0I7 4981 aa10.35□□□□□ -0.75
PTPRC-206ENST00000413409 CCDC179H3BU77 68 aa10.34□□□□□ -0.75
PTPRC-206ENST00000413409 BPY2O14599 106 aa10.34□□□□□ -0.75
PTPRC-206ENST00000413409 LINC00483Q53H64 154 aa10.34□□□□□ -0.75
PTPRC-206ENST00000413409 UQCRQO14949 82 aa10.33□□□□□ -0.76
PTPRC-206ENST00000413409 RPL37AP61513 92 aaKnown RBP10.33□□□□□ -0.76
PTPRC-206ENST00000413409 COX7CP15954 63 aa10.33□□□□□ -0.76
PTPRC-206ENST00000413409 SERP2Q8N6R1 65 aa10.32□□□□□ -0.76
PTPRC-206ENST00000413409 ZNF861PO60384 105 aa10.31□□□□□ -0.76
PTPRC-206ENST00000413409 LCE2CQ5TA81 110 aa10.31□□□□□ -0.76
PTPRC-206ENST00000413409 IGKV4-1P06312 121 aa10.3□□□□□ -0.76
PTPRC-206ENST00000413409 LPAP08519 4548 aa10.29□□□□□ -0.76
PTPRC-206ENST00000413409 SMIM20Q8N5G0 67 aa10.28□□□□□ -0.76
PTPRC-206ENST00000413409 IGLV7-43P04211 117 aa10.25□□□□□ -0.77
PTPRC-206ENST00000413409 MUC2Q02817 5179 aa10.25□□□□□ -0.77
PTPRC-206ENST00000413409 A0A087WSZ3 146 aa10.24□□□□□ -0.77
PTPRC-206ENST00000413409 A0A0G2JQZ4 141 aa10.24□□□□□ -0.77
PTPRC-206ENST00000413409 C9orf153Q5TBE3 101 aa10.23□□□□□ -0.77
PTPRC-206ENST00000413409 TRAV7A0A075B6U4 112 aa10.22□□□□□ -0.77
PTPRC-206ENST00000413409 Q8N9L7 120 aa10.21□□□□□ -0.78
PTPRC-206ENST00000413409 DSCR10P59022 87 aa10.2□□□□□ -0.78
PTPRC-206ENST00000413409 LCE2AQ5TA79 106 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms