RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 C12orf57Q99622 126 aa11.97□□□□□ -0.49
MSH6-202ENST00000411819 S100A6P06703 90 aa11.96□□□□□ -0.49
MSH6-202ENST00000411819 MT1HP80294 61 aa11.94□□□□□ -0.5
MSH6-202ENST00000411819 LCE2DQ5TA82 110 aaPredicted RBP11.94□□□□□ -0.5
MSH6-202ENST00000411819 Q6JHZ5 121 aa11.94□□□□□ -0.5
MSH6-202ENST00000411819 CLEC2BQ92478 149 aa11.94□□□□□ -0.5
MSH6-202ENST00000411819 HIST1H4GQ99525 98 aa11.93□□□□□ -0.5
MSH6-202ENST00000411819 IGFL1Q6UW32 110 aa11.91□□□□□ -0.5
MSH6-202ENST00000411819 TRBV7-7A0A0K0K1E9 115 aa11.9□□□□□ -0.5
MSH6-202ENST00000411819 SCGB1D1O95968 90 aa11.9□□□□□ -0.5
MSH6-202ENST00000411819 BVES-AS1Q5T3Y7 98 aa11.9□□□□□ -0.5
MSH6-202ENST00000411819 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.9□□□□□ -0.5
MSH6-202ENST00000411819 OCIAD2Q56VL3 154 aa11.89□□□□□ -0.51
MSH6-202ENST00000411819 CFC1BP0CG36 223 aa11.87□□□□□ -0.51
MSH6-202ENST00000411819 COX8AP10176 69 aa11.85□□□□□ -0.51
MSH6-202ENST00000411819 SNHG12Q9BXW3 62 aa11.85□□□□□ -0.51
MSH6-202ENST00000411819 S100A1P23297 94 aa11.84□□□□□ -0.51
MSH6-202ENST00000411819 COX6B2Q6YFQ2 88 aa11.84□□□□□ -0.51
MSH6-202ENST00000411819 PPDPFLQ8WWR9 84 aa11.84□□□□□ -0.51
MSH6-202ENST00000411819 H3BUT2 72 aa11.82□□□□□ -0.52
MSH6-202ENST00000411819 M0R2T5 61 aa11.79□□□□□ -0.52
MSH6-202ENST00000411819 RAB37Q96AX2 223 aa11.79□□□□□ -0.52
MSH6-202ENST00000411819 OBSCN-AS1Q96MR7 158 aa11.79□□□□□ -0.52
MSH6-202ENST00000411819 DLEU1O43261 78 aa11.77□□□□□ -0.53
MSH6-202ENST00000411819 FSIP2Q5CZC0 6907 aa11.77□□□□□ -0.53
MSH6-202ENST00000411819 LST1O00453 97 aa11.76□□□□□ -0.53
MSH6-202ENST00000411819 CFC1P0CG37 223 aa11.76□□□□□ -0.53
MSH6-202ENST00000411819 C14orf144Q96I85 54 aa11.76□□□□□ -0.53
MSH6-202ENST00000411819 SNCGO76070 127 aa11.75□□□□□ -0.53
MSH6-202ENST00000411819 KRTAP10-6P60371 365 aaPredicted RBP11.74□□□□□ -0.53
MSH6-202ENST00000411819 LORP23490 312 aaPredicted RBP11.73□□□□□ -0.53
MSH6-202ENST00000411819 ATP11AUNQ6ZP68 121 aa11.73□□□□□ -0.53
MSH6-202ENST00000411819 CRCT1Q9UGL9 99 aa11.73□□□□□ -0.53
MSH6-202ENST00000411819 PAM16Q9Y3D7 125 aa11.73□□□□□ -0.53
MSH6-202ENST00000411819 SS18L2Q9UHA2 77 aa11.72□□□□□ -0.53
MSH6-202ENST00000411819 A0A0B4J2C4 111 aa11.71□□□□□ -0.53
MSH6-202ENST00000411819 SPATA45Q537H7 98 aa11.71□□□□□ -0.53
MSH6-202ENST00000411819 Q75L30 129 aa11.71□□□□□ -0.53
MSH6-202ENST00000411819 H0YGX0 51 aa11.7□□□□□ -0.54
MSH6-202ENST00000411819 FAM218AQ96MZ4 157 aa11.7□□□□□ -0.54
MSH6-202ENST00000411819 HIGD1BQ9P298 99 aa11.7□□□□□ -0.54
MSH6-202ENST00000411819 NDUFV3P56181 108 aaKnown RBP11.68□□□□□ -0.54
MSH6-202ENST00000411819 Q96NJ1 140 aa11.68□□□□□ -0.54
MSH6-202ENST00000411819 FLGP20930 4061 aaPredicted RBP11.67□□□□□ -0.54
MSH6-202ENST00000411819 Q6Q795 121 aa11.67□□□□□ -0.54
MSH6-202ENST00000411819 VAMP8Q9BV40 100 aa11.67□□□□□ -0.54
MSH6-202ENST00000411819 C2orf91Q6ZV80 131 aa11.66□□□□□ -0.54
MSH6-202ENST00000411819 TEN1Q86WV5 123 aa11.66□□□□□ -0.54
MSH6-202ENST00000411819 A0A087WSZ3 146 aa11.63□□□□□ -0.55
MSH6-202ENST00000411819 H3BMG7 143 aa11.62□□□□□ -0.55
MSH6-202ENST00000411819 FABP2P12104 132 aa11.62□□□□□ -0.55
MSH6-202ENST00000411819 CEND1Q8N111 149 aa11.62□□□□□ -0.55
MSH6-202ENST00000411819 TMEM238LA0A1B0GVL6 79 aa11.61□□□□□ -0.55
MSH6-202ENST00000411819 A6NJY4 79 aa11.61□□□□□ -0.55
MSH6-202ENST00000411819 GHRHP01286 108 aa11.6□□□□□ -0.55
MSH6-202ENST00000411819 PRO1854Q9UHT4 67 aa11.6□□□□□ -0.55
MSH6-202ENST00000411819 A0A1B0GX51 115 aa11.59□□□□□ -0.55
MSH6-202ENST00000411819 FXYD2P54710 66 aa11.56□□□□□ -0.56
MSH6-202ENST00000411819 C20orf166-AS1Q96NR2 134 aa11.55□□□□□ -0.56
MSH6-202ENST00000411819 TRIAP1O43715 76 aa11.54□□□□□ -0.56
MSH6-202ENST00000411819 SIGMAR1Q99720 223 aa11.54□□□□□ -0.56
MSH6-202ENST00000411819 A8MUU9 505 aa11.52□□□□□ -0.57
MSH6-202ENST00000411819 DSCR10P59022 87 aa11.52□□□□□ -0.57
MSH6-202ENST00000411819 A0A1B0GV72 72 aa11.5□□□□□ -0.57
MSH6-202ENST00000411819 A0A1W2PNM2 257 aa11.5□□□□□ -0.57
MSH6-202ENST00000411819 DNAL4O96015 105 aa11.5□□□□□ -0.57
MSH6-202ENST00000411819 PSMB2P49721 201 aa11.46□□□□□ -0.57
MSH6-202ENST00000411819 ORMDL1Q9P0S3 153 aa11.46□□□□□ -0.57
MSH6-202ENST00000411819 TRBV20-1A0A075B6N2 111 aa11.45□□□□□ -0.58
MSH6-202ENST00000411819 ANKRD29Q8N6D5 301 aa11.45□□□□□ -0.58
MSH6-202ENST00000411819 K7ERJ3 54 aa11.44□□□□□ -0.58
MSH6-202ENST00000411819 HSD52Q0P140 79 aa11.44□□□□□ -0.58
MSH6-202ENST00000411819 IGKV4-1P06312 121 aa11.43□□□□□ -0.58
MSH6-202ENST00000411819 TRBV7-4A0A0J9YYF1 115 aa11.41□□□□□ -0.58
MSH6-202ENST00000411819 LINC00313P59037 77 aa11.41□□□□□ -0.58
MSH6-202ENST00000411819 H3BQ85 93 aa11.4□□□□□ -0.58
MSH6-202ENST00000411819 COX6CP09669 75 aa11.39□□□□□ -0.59
MSH6-202ENST00000411819 TMEM256-PLSCR3K7ERE1 68 aa11.38□□□□□ -0.59
MSH6-202ENST00000411819 PYY3Q5JQD4 70 aa11.37□□□□□ -0.59
MSH6-202ENST00000411819 TRACP01848 142 aa11.36□□□□□ -0.59
MSH6-202ENST00000411819 CCKP06307 115 aa11.36□□□□□ -0.59
MSH6-202ENST00000411819 DEFB116Q30KQ4 102 aa11.36□□□□□ -0.59
MSH6-202ENST00000411819 KRTAP16-1A8MUX0 517 aa11.33□□□□□ -0.6
MSH6-202ENST00000411819 FAM236DA0A1B0GTK5 79 aa11.31□□□□□ -0.6
MSH6-202ENST00000411819 FAM236CP0DP71 79 aa11.31□□□□□ -0.6
MSH6-202ENST00000411819 NOTCH2NLQ7Z3S9 236 aa11.31□□□□□ -0.6
MSH6-202ENST00000411819 IGHV6-1A0A0B4J1U7 121 aa11.3□□□□□ -0.6
MSH6-202ENST00000411819 VPS25Q9BRG1 176 aa11.3□□□□□ -0.6
MSH6-202ENST00000411819 LINC00472Q9H8W2 130 aa11.3□□□□□ -0.6
MSH6-202ENST00000411819 UBE2V1Q13404 147 aa11.29□□□□□ -0.6
MSH6-202ENST00000411819 UQCR10Q9UDW1 63 aa11.28□□□□□ -0.6
MSH6-202ENST00000411819 SCGB1C2P0DMR2 95 aa11.25□□□□□ -0.61
MSH6-202ENST00000411819 KRTAP9-8Q9BYQ0 159 aa11.24□□□□□ -0.61
MSH6-202ENST00000411819 RBM3P98179 157 aaKnown RBP11.22□□□□□ -0.61
MSH6-202ENST00000411819 RBM12B-AS1Q9P1G2 102 aa11.22□□□□□ -0.61
MSH6-202ENST00000411819 DSCR8Q96T75 97 aa11.21□□□□□ -0.61
MSH6-202ENST00000411819 A0A1B0GVX0 72 aa11.19□□□□□ -0.62
MSH6-202ENST00000411819 C8orf87E5RJ46 101 aa11.19□□□□□ -0.62
MSH6-202ENST00000411819 HRES1P13985 223 aa11.19□□□□□ -0.62
MSH6-202ENST00000411819 TMA7Q9Y2S6 64 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms