RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 IGFL1Q6UW32 110 aa5.32□□□□□ -1.56
SNX13-201ENST00000409076 KRTAP26-1Q6PEX3 210 aa5.32□□□□□ -1.56
SNX13-201ENST00000409076 C1orf64Q8NEQ6 169 aa5.32□□□□□ -1.56
SNX13-201ENST00000409076 KCNQ1DNQ9H478 68 aa5.31□□□□□ -1.56
SNX13-201ENST00000409076 IGHV6-1A0A0B4J1U7 121 aa5.31□□□□□ -1.56
SNX13-201ENST00000409076 A8MUN3 132 aa5.31□□□□□ -1.56
SNX13-201ENST00000409076 DSCR10P59022 87 aa5.3□□□□□ -1.56
SNX13-201ENST00000409076 OCR1Q9BZK8 76 aa5.3□□□□□ -1.56
SNX13-201ENST00000409076 EPM2AB3EWF7 344 aa5.3□□□□□ -1.56
SNX13-201ENST00000409076 H0Y9P7 68 aa5.3□□□□□ -1.56
SNX13-201ENST00000409076 CASC2Q6XLA1 102 aa5.3□□□□□ -1.56
SNX13-201ENST00000409076 KRTAP1-5Q9BYS1 174 aa5.3□□□□□ -1.56
SNX13-201ENST00000409076 V9GYY9 64 aa5.3□□□□□ -1.56
SNX13-201ENST00000409076 A8MU10 97 aa5.29□□□□□ -1.56
SNX13-201ENST00000409076 CHKB-CPT1BH3BT56 60 aa5.29□□□□□ -1.56
SNX13-201ENST00000409076 CDK2AP2O75956 126 aa5.29□□□□□ -1.56
SNX13-201ENST00000409076 NDUFC1O43677 76 aa5.29□□□□□ -1.56
SNX13-201ENST00000409076 PRR15LQ9BU68 103 aa5.29□□□□□ -1.56
SNX13-201ENST00000409076 KRTAP7-1Q8IUC3 87 aa5.28□□□□□ -1.56
SNX13-201ENST00000409076 H3BQ85 93 aa5.28□□□□□ -1.56
SNX13-201ENST00000409076 KRTAP11-1Q8IUC1 163 aa5.27□□□□□ -1.57
SNX13-201ENST00000409076 K7EIL1 84 aa5.27□□□□□ -1.57
SNX13-201ENST00000409076 ANK2Q01484 3957 aa5.26□□□□□ -1.57
SNX13-201ENST00000409076 SEC61GP60059 68 aa5.26□□□□□ -1.57
SNX13-201ENST00000409076 B9D2Q9BPU9 175 aa5.25□□□□□ -1.57
SNX13-201ENST00000409076 A6NED7 52 aa5.24□□□□□ -1.57
SNX13-201ENST00000409076 PANO1I0J062 215 aa5.24□□□□□ -1.57
SNX13-201ENST00000409076 BCE1O60756 84 aa5.24□□□□□ -1.57
SNX13-201ENST00000409076 SPAG11AQ6PDA7 123 aa5.24□□□□□ -1.57
SNX13-201ENST00000409076 CIRBP-AS1Q8TBR5 109 aa5.24□□□□□ -1.57
SNX13-201ENST00000409076 NDUFB1O75438 58 aa5.24□□□□□ -1.57
SNX13-201ENST00000409076 DNAH10Q8IVF4 4471 aa5.24□□□□□ -1.57
SNX13-201ENST00000409076 FBN3Q75N90 2809 aa5.24□□□□□ -1.57
SNX13-201ENST00000409076 MOBPQ13875 183 aa5.24□□□□□ -1.57
SNX13-201ENST00000409076 LYSTQ99698 3801 aa5.23□□□□□ -1.57
SNX13-201ENST00000409076 ATP5EP56381 51 aaPredicted RBP5.23□□□□□ -1.57
SNX13-201ENST00000409076 IGLV5-48A0A075B6I7 105 aa5.23□□□□□ -1.57
SNX13-201ENST00000409076 PMAIP1Q13794 54 aa5.22□□□□□ -1.57
SNX13-201ENST00000409076 TRAV22A0A0B4J277 110 aa5.21□□□□□ -1.57
SNX13-201ENST00000409076 MDFIQ99750 246 aa5.2□□□□□ -1.58
SNX13-201ENST00000409076 DMBT1Q9UGM3 2413 aaPredicted RBP5.19□□□□□ -1.58
SNX13-201ENST00000409076 hDV103S1A0JD37 113 aa5.19□□□□□ -1.58
SNX13-201ENST00000409076 H3BNG1 76 aa5.19□□□□□ -1.58
SNX13-201ENST00000409076 C16orf90A8MZG2 172 aa5.18□□□□□ -1.58
SNX13-201ENST00000409076 F8WDY8 70 aa5.18□□□□□ -1.58
SNX13-201ENST00000409076 PRR15Q8IV56 129 aa5.18□□□□□ -1.58
SNX13-201ENST00000409076 LY6G6CO95867 125 aa5.18□□□□□ -1.58
SNX13-201ENST00000409076 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.18□□□□□ -1.58
SNX13-201ENST00000409076 KRTAP4-16G5E9R7 235 aaPredicted RBP5.16□□□□□ -1.58
SNX13-201ENST00000409076 CNBPP62633 177 aaKnown RBP5.16□□□□□ -1.58
SNX13-201ENST00000409076 IGLV8-61A0A075B6I0 122 aa5.16□□□□□ -1.58
SNX13-201ENST00000409076 SPINK1P00995 79 aa5.15□□□□□ -1.58
SNX13-201ENST00000409076 TNP2Q05952 138 aa5.15□□□□□ -1.59
SNX13-201ENST00000409076 SPRR4Q96PI1 79 aa5.14□□□□□ -1.59
SNX13-201ENST00000409076 SPRR1AP35321 89 aa5.13□□□□□ -1.59
SNX13-201ENST00000409076 COA5Q86WW8 74 aa5.13□□□□□ -1.59
SNX13-201ENST00000409076 A0A087X002 238 aa5.13□□□□□ -1.59
SNX13-201ENST00000409076 TLX1NBP0CAT3 122 aa5.13□□□□□ -1.59
SNX13-201ENST00000409076 NOTCH2NLQ7Z3S9 236 aa5.13□□□□□ -1.59
SNX13-201ENST00000409076 PRR26Q8N8Z3 221 aa5.13□□□□□ -1.59
SNX13-201ENST00000409076 A8MWP4 228 aa5.12□□□□□ -1.59
SNX13-201ENST00000409076 NBDYA0A0U1RRE5 68 aa5.11□□□□□ -1.59
SNX13-201ENST00000409076 C14orf177Q52M58 125 aa5.1□□□□□ -1.59
SNX13-201ENST00000409076 FLG2Q5D862 2391 aaPredicted RBP5.1□□□□□ -1.59
SNX13-201ENST00000409076 IGLV5-52A0A0A0MRZ9 124 aa5.1□□□□□ -1.59
SNX13-201ENST00000409076 PSORS1C2Q9UIG4 136 aa5.1□□□□□ -1.59
SNX13-201ENST00000409076 IGKV2D-30A0A075B6S6 120 aa5.09□□□□□ -1.59
SNX13-201ENST00000409076 IGKV2-30P06310 120 aa5.09□□□□□ -1.59
SNX13-201ENST00000409076 RTL8CO15255 209 aa5.09□□□□□ -1.6
SNX13-201ENST00000409076 SPACA4Q8TDM5 124 aa5.08□□□□□ -1.6
SNX13-201ENST00000409076 C9orf163Q8N9P6 203 aa5.08□□□□□ -1.6
SNX13-201ENST00000409076 CD164Q04900 197 aa5.07□□□□□ -1.6
SNX13-201ENST00000409076 Q1T7F1 81 aa5.07□□□□□ -1.6
SNX13-201ENST00000409076 PLA2G2DQ9UNK4 145 aa5.07□□□□□ -1.6
SNX13-201ENST00000409076 C8orf17Q9NRJ1 99 aa5.07□□□□□ -1.6
SNX13-201ENST00000409076 APLNQ9ULZ1 77 aa5.07□□□□□ -1.6
SNX13-201ENST00000409076 MEGF8Q7Z7M0 2845 aa5.06□□□□□ -1.6
SNX13-201ENST00000409076 MMP24-AS1A0A0U1RRL7 71 aa5.06□□□□□ -1.6
SNX13-201ENST00000409076 IGLV5-37A0A075B6J1 123 aa5.06□□□□□ -1.6
SNX13-201ENST00000409076 Q5VV11 94 aa5.05□□□□□ -1.6
SNX13-201ENST00000409076 Q8N9P0 234 aaPredicted RBP5.05□□□□□ -1.6
SNX13-201ENST00000409076 ZCCHC13Q8WW36 166 aaKnown RBP5.04□□□□□ -1.6
SNX13-201ENST00000409076 LINC00472Q9H8W2 130 aa5.04□□□□□ -1.6
SNX13-201ENST00000409076 HUWE1Q7Z6Z7 4374 aaKnown RBP5.03□□□□□ -1.6
SNX13-201ENST00000409076 A0A087WTM6 91 aa5.02□□□□□ -1.61
SNX13-201ENST00000409076 SPINK7P58062 85 aa5.02□□□□□ -1.61
SNX13-201ENST00000409076 MRPL34Q9BQ48 92 aaKnown RBP5.01□□□□□ -1.61
SNX13-201ENST00000409076 KRTAP29-1A8MX34 341 aaPredicted RBP5.01□□□□□ -1.61
SNX13-201ENST00000409076 DNAH9Q9NYC9 4486 aa5.01□□□□□ -1.61
SNX13-201ENST00000409076 A0A1B0GVX0 72 aa5.01□□□□□ -1.61
SNX13-201ENST00000409076 PRAC1Q96KF2 57 aa5.01□□□□□ -1.61
SNX13-201ENST00000409076 CYP4F30PQ9H0H9 118 aa4.99□□□□□ -1.61
SNX13-201ENST00000409076 LCE6AA0A183 80 aa4.99□□□□□ -1.61
SNX13-201ENST00000409076 Q5W150 140 aa4.99□□□□□ -1.61
SNX13-201ENST00000409076 LIMD2Q9BT23 127 aa4.99□□□□□ -1.61
SNX13-201ENST00000409076 SMR3BP02814 79 aaPredicted RBP4.99□□□□□ -1.61
SNX13-201ENST00000409076 C1orf134Q5TEV5 83 aa4.99□□□□□ -1.61
SNX13-201ENST00000409076 NUPR2A6NF83 97 aa4.98□□□□□ -1.61
SNX13-201ENST00000409076 HRES1P13985 223 aa4.98□□□□□ -1.61
SNX13-201ENST00000409076 LCA10Q71F78 164 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms