RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 CHKB-CPT1BH3BT56 60 aa5.16□□□□□ -1.58
PTPRD-204ENST00000397606 FAM30AQ9NZY2 134 aa5.15□□□□□ -1.58
PTPRD-204ENST00000397606 IGLV5-48A0A075B6I7 105 aa5.15□□□□□ -1.59
PTPRD-204ENST00000397606 Q8N9L7 120 aa5.14□□□□□ -1.59
PTPRD-204ENST00000397606 CDIP1Q9H305 208 aa5.14□□□□□ -1.59
PTPRD-204ENST00000397606 TRBV7-7A0A0K0K1E9 115 aa5.14□□□□□ -1.59
PTPRD-204ENST00000397606 CSMD1Q96PZ7 3565 aa5.13□□□□□ -1.59
PTPRD-204ENST00000397606 TRAV7A0A075B6U4 112 aa5.13□□□□□ -1.59
PTPRD-204ENST00000397606 FAM229BQ4G0N7 80 aa5.12□□□□□ -1.59
PTPRD-204ENST00000397606 hDV103S1A0JD37 113 aa5.12□□□□□ -1.59
PTPRD-204ENST00000397606 LINC00313P59037 77 aa5.12□□□□□ -1.59
PTPRD-204ENST00000397606 NDUFC1O43677 76 aa5.11□□□□□ -1.59
PTPRD-204ENST00000397606 SPINK1P00995 79 aa5.11□□□□□ -1.59
PTPRD-204ENST00000397606 ZFHX3Q15911 3703 aa5.11□□□□□ -1.59
PTPRD-204ENST00000397606 FBN1P35555 2871 aaKnown RBP5.11□□□□□ -1.59
PTPRD-204ENST00000397606 COX7CP15954 63 aa5.11□□□□□ -1.59
PTPRD-204ENST00000397606 A8MWP4 228 aa5.1□□□□□ -1.59
PTPRD-204ENST00000397606 C8orf87E5RJ46 101 aa5.1□□□□□ -1.59
PTPRD-204ENST00000397606 VWFP04275 2813 aa5.1□□□□□ -1.59
PTPRD-204ENST00000397606 LINC00208Q96KT6 92 aa5.1□□□□□ -1.59
PTPRD-204ENST00000397606 TP53AIP1Q9HCN2 124 aa5.1□□□□□ -1.59
PTPRD-204ENST00000397606 PRR4Q16378 134 aa5.09□□□□□ -1.59
PTPRD-204ENST00000397606 A0A0G2JQZ4 141 aa5.09□□□□□ -1.59
PTPRD-204ENST00000397606 PANO1I0J062 215 aa5.09□□□□□ -1.59
PTPRD-204ENST00000397606 TENM3Q9P273 2699 aa5.09□□□□□ -1.59
PTPRD-204ENST00000397606 A0A1W2PNM2 257 aa5.09□□□□□ -1.59
PTPRD-204ENST00000397606 CD164Q04900 197 aa5.08□□□□□ -1.6
PTPRD-204ENST00000397606 C5orf47Q569G3 176 aa5.08□□□□□ -1.6
PTPRD-204ENST00000397606 ANK3Q12955 4377 aaKnown RBP5.08□□□□□ -1.6
PTPRD-204ENST00000397606 CSMD2Q7Z408 3487 aa5.08□□□□□ -1.6
PTPRD-204ENST00000397606 TMEM258P61165 79 aa5.08□□□□□ -1.6
PTPRD-204ENST00000397606 LINC01600Q96MT4 127 aa5.08□□□□□ -1.6
PTPRD-204ENST00000397606 SNURFQ9Y675 71 aa5.08□□□□□ -1.6
PTPRD-204ENST00000397606 SPRR1BP22528 89 aa5.07□□□□□ -1.6
PTPRD-204ENST00000397606 SMIM29Q86T20 159 aa5.07□□□□□ -1.6
PTPRD-204ENST00000397606 OBSCN-AS1Q96MR7 158 aa5.07□□□□□ -1.6
PTPRD-204ENST00000397606 RETNLBQ9BQ08 111 aa5.07□□□□□ -1.6
PTPRD-204ENST00000397606 H0Y9P7 68 aa5.07□□□□□ -1.6
PTPRD-204ENST00000397606 PRR26Q8N8Z3 221 aa5.07□□□□□ -1.6
PTPRD-204ENST00000397606 Q5VSD8 79 aa5.06□□□□□ -1.6
PTPRD-204ENST00000397606 Q96NJ1 140 aa5.06□□□□□ -1.6
PTPRD-204ENST00000397606 K7EQZ3 153 aa5.05□□□□□ -1.6
PTPRD-204ENST00000397606 PRR15Q8IV56 129 aa5.05□□□□□ -1.6
PTPRD-204ENST00000397606 FAM236DA0A1B0GTK5 79 aa5.04□□□□□ -1.6
PTPRD-204ENST00000397606 A0A1B0GVX0 72 aa5.04□□□□□ -1.6
PTPRD-204ENST00000397606 FAM236CP0DP71 79 aa5.04□□□□□ -1.6
PTPRD-204ENST00000397606 KRTAP4-16G5E9R7 235 aaPredicted RBP5.04□□□□□ -1.6
PTPRD-204ENST00000397606 ATP5EP56381 51 aaPredicted RBP5.03□□□□□ -1.6
PTPRD-204ENST00000397606 TMEM254Q8TBM7 123 aa5.03□□□□□ -1.6
PTPRD-204ENST00000397606 MRPL34Q9BQ48 92 aaKnown RBP5.03□□□□□ -1.6
PTPRD-204ENST00000397606 ATP11AUNQ6ZP68 121 aa5.03□□□□□ -1.6
PTPRD-204ENST00000397606 IGKV2D-30A0A075B6S6 120 aa5.02□□□□□ -1.61
PTPRD-204ENST00000397606 IGKV2-30P06310 120 aa5.02□□□□□ -1.61
PTPRD-204ENST00000397606 C8orf17Q9NRJ1 99 aa5.02□□□□□ -1.61
PTPRD-204ENST00000397606 C1orf64Q8NEQ6 169 aa5.02□□□□□ -1.61
PTPRD-204ENST00000397606 V9GYY9 64 aa5.02□□□□□ -1.61
PTPRD-204ENST00000397606 IGLV8-61A0A075B6I0 122 aa5.02□□□□□ -1.61
PTPRD-204ENST00000397606 SEC61GP60059 68 aa5.02□□□□□ -1.61
PTPRD-204ENST00000397606 TRAV22A0A0B4J277 110 aa5.01□□□□□ -1.61
PTPRD-204ENST00000397606 DSCR10P59022 87 aa5.01□□□□□ -1.61
PTPRD-204ENST00000397606 PCOTHQ58A44 107 aa5.01□□□□□ -1.61
PTPRD-204ENST00000397606 SVEP1Q4LDE5 3571 aa5.01□□□□□ -1.61
PTPRD-204ENST00000397606 CCDC179H3BU77 68 aa5□□□□□ -1.61
PTPRD-204ENST00000397606 H3BPC8 53 aa5□□□□□ -1.61
PTPRD-204ENST00000397606 LINC00483Q53H64 154 aa4.99□□□□□ -1.61
PTPRD-204ENST00000397606 KRTAP7-1Q8IUC3 87 aa4.99□□□□□ -1.61
PTPRD-204ENST00000397606 SPTSSBQ8NFR3 76 aa4.98□□□□□ -1.61
PTPRD-204ENST00000397606 C9orf92A6NGG3 77 aa4.98□□□□□ -1.61
PTPRD-204ENST00000397606 TENM2Q9NT68 2774 aa4.97□□□□□ -1.61
PTPRD-204ENST00000397606 KRTAP11-1Q8IUC1 163 aa4.96□□□□□ -1.62
PTPRD-204ENST00000397606 LOC101927531A0A1B0GV80 90 aa4.95□□□□□ -1.62
PTPRD-204ENST00000397606 IGLV7-46A0A075B6I9 117 aa4.95□□□□□ -1.62
PTPRD-204ENST00000397606 PKD1L1Q8TDX9 2849 aa4.94□□□□□ -1.62
PTPRD-204ENST00000397606 Q6ZSA8 131 aa4.93□□□□□ -1.62
PTPRD-204ENST00000397606 KRTAP13-1Q8IUC0 172 aa4.91□□□□□ -1.62
PTPRD-204ENST00000397606 C7orf65Q6ZTY9 151 aa4.91□□□□□ -1.62
PTPRD-204ENST00000397606 A0A087X002 238 aa4.9□□□□□ -1.62
PTPRD-204ENST00000397606 PRR15LQ9BU68 103 aa4.9□□□□□ -1.62
PTPRD-204ENST00000397606 SERP1Q9Y6X1 66 aa4.9□□□□□ -1.62
PTPRD-204ENST00000397606 TGP01266 2768 aa4.9□□□□□ -1.63
PTPRD-204ENST00000397606 LINC00472Q9H8W2 130 aa4.9□□□□□ -1.63
PTPRD-204ENST00000397606 Q8N1X5 172 aa4.88□□□□□ -1.63
PTPRD-204ENST00000397606 DMBT1Q9UGM3 2413 aaPredicted RBP4.88□□□□□ -1.63
PTPRD-204ENST00000397606 ACYP2P14621 99 aa4.88□□□□□ -1.63
PTPRD-204ENST00000397606 TRRAPQ9Y4A5 3859 aa4.88□□□□□ -1.63
PTPRD-204ENST00000397606 C1orf195Q5TG92 126 aa4.87□□□□□ -1.63
PTPRD-204ENST00000397606 MPLKIPQ8TAP9 179 aa4.86□□□□□ -1.63
PTPRD-204ENST00000397606 OXTP01178 125 aa4.85□□□□□ -1.63
PTPRD-204ENST00000397606 FP248Q71RG6 208 aaPredicted RBP4.85□□□□□ -1.63
PTPRD-204ENST00000397606 FBN3Q75N90 2809 aa4.85□□□□□ -1.63
PTPRD-204ENST00000397606 COX6B2Q6YFQ2 88 aa4.84□□□□□ -1.63
PTPRD-204ENST00000397606 MMP24-AS1A0A0U1RRL7 71 aa4.84□□□□□ -1.63
PTPRD-204ENST00000397606 AKAP9Q99996 3911 aa4.84□□□□□ -1.64
PTPRD-204ENST00000397606 RPS29P62273 56 aaKnown RBP4.84□□□□□ -1.64
PTPRD-204ENST00000397606 ZNF469Q96JG9 3925 aaPredicted RBP4.83□□□□□ -1.64
PTPRD-204ENST00000397606 SMIM26A0A096LP01 95 aa4.83□□□□□ -1.64
PTPRD-204ENST00000397606 RBM12B-AS1Q9P1G2 102 aa4.82□□□□□ -1.64
PTPRD-204ENST00000397606 KLKP1Q107X0 134 aa4.82□□□□□ -1.64
PTPRD-204ENST00000397606 KRTAP13-2Q52LG2 175 aa4.82□□□□□ -1.64
PTPRD-204ENST00000397606 FLG2Q5D862 2391 aaPredicted RBP4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 137.6 ms