RNA–Protein interactions for RNA: ENST00000397004.8

NUP98-204, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-204ENST00000397004 UBE2BP63146 152 aa8.76□□□□□ -1.01
NUP98-204ENST00000397004 hDV103S1A0JD37 113 aa8.75□□□□□ -1.01
NUP98-204ENST00000397004 PRLHP81277 87 aa8.75□□□□□ -1.01
NUP98-204ENST00000397004 KRTAP1-5Q9BYS1 174 aa8.75□□□□□ -1.01
NUP98-204ENST00000397004 STAB2Q8WWQ8 2551 aa8.74□□□□□ -1.01
NUP98-204ENST00000397004 A0A1B0GW54 56 aa8.74□□□□□ -1.01
NUP98-204ENST00000397004 C1orf64Q8NEQ6 169 aa8.74□□□□□ -1.01
NUP98-204ENST00000397004 REG3GQ6UW15 175 aa8.73□□□□□ -1.01
NUP98-204ENST00000397004 RPL37AP61513 92 aaKnown RBP8.73□□□□□ -1.01
NUP98-204ENST00000397004 PSCAO43653 123 aa8.73□□□□□ -1.01
NUP98-204ENST00000397004 A0A096LNI7 61 aa8.72□□□□□ -1.01
NUP98-204ENST00000397004 PRR4Q16378 134 aa8.72□□□□□ -1.01
NUP98-204ENST00000397004 BRK1Q8WUW1 75 aa8.71□□□□□ -1.01
NUP98-204ENST00000397004 HCG22E2RYF7 251 aa8.7□□□□□ -1.02
NUP98-204ENST00000397004 PKIGQ9Y2B9 76 aa8.7□□□□□ -1.02
NUP98-204ENST00000397004 A0A087WSZ3 146 aa8.69□□□□□ -1.02
NUP98-204ENST00000397004 IGKV2-24A0A0C4DH68 120 aa8.68□□□□□ -1.02
NUP98-204ENST00000397004 WFDC13Q8IUB5 93 aa8.68□□□□□ -1.02
NUP98-204ENST00000397004 FRAS1Q86XX4 4008 aa8.67□□□□□ -1.02
NUP98-204ENST00000397004 KRTAP29-1A8MX34 341 aaPredicted RBP8.67□□□□□ -1.02
NUP98-204ENST00000397004 CHTF8P0CG12 524 aa8.65□□□□□ -1.02
NUP98-204ENST00000397004 PLECQ15149 4684 aaKnown RBP8.65□□□□□ -1.02
NUP98-204ENST00000397004 IGLV8-61A0A075B6I0 122 aa8.65□□□□□ -1.03
NUP98-204ENST00000397004 MGAM2Q2M2H8 2515 aa8.62□□□□□ -1.03
NUP98-204ENST00000397004 PHF5AQ7RTV0 110 aaKnown RBP8.62□□□□□ -1.03
NUP98-204ENST00000397004 C16orf90A8MZG2 172 aa8.61□□□□□ -1.03
NUP98-204ENST00000397004 CNBPP62633 177 aaKnown RBP8.61□□□□□ -1.03
NUP98-204ENST00000397004 DYNC2H1Q8NCM8 4307 aaKnown RBP8.61□□□□□ -1.03
NUP98-204ENST00000397004 Q1T7F1 81 aa8.61□□□□□ -1.03
NUP98-204ENST00000397004 A8MU10 97 aa8.6□□□□□ -1.03
NUP98-204ENST00000397004 CYP4F30PQ9H0H9 118 aa8.6□□□□□ -1.03
NUP98-204ENST00000397004 MDFIQ99750 246 aa8.6□□□□□ -1.03
NUP98-204ENST00000397004 PANO1I0J062 215 aa8.59□□□□□ -1.03
NUP98-204ENST00000397004 K7EIL1 84 aa8.59□□□□□ -1.03
NUP98-204ENST00000397004 PSPHP1O15172 72 aa8.59□□□□□ -1.03
NUP98-204ENST00000397004 TRAV22A0A0B4J277 110 aa8.58□□□□□ -1.04
NUP98-204ENST00000397004 LINC00472Q9H8W2 130 aa8.58□□□□□ -1.04
NUP98-204ENST00000397004 LINC00208Q96KT6 92 aa8.57□□□□□ -1.04
NUP98-204ENST00000397004 UBE2AP49459 152 aa8.55□□□□□ -1.04
NUP98-204ENST00000397004 DNAH8Q96JB1 4490 aa8.55□□□□□ -1.04
NUP98-204ENST00000397004 PRR15Q8IV56 129 aa8.55□□□□□ -1.04
NUP98-204ENST00000397004 HECTD4Q9Y4D8 3996 aa8.54□□□□□ -1.04
NUP98-204ENST00000397004 SPRR1BP22528 89 aa8.52□□□□□ -1.04
NUP98-204ENST00000397004 CASC2Q6XLA1 102 aa8.52□□□□□ -1.05
NUP98-204ENST00000397004 STARD9Q9P2P6 4700 aa8.51□□□□□ -1.05
NUP98-204ENST00000397004 A8MUN3 132 aa8.51□□□□□ -1.05
NUP98-204ENST00000397004 H0Y9P7 68 aa8.5□□□□□ -1.05
NUP98-204ENST00000397004 KMT2AQ03164 3969 aa8.5□□□□□ -1.05
NUP98-204ENST00000397004 A8MWP4 228 aa8.5□□□□□ -1.05
NUP98-204ENST00000397004 C9orf163Q8N9P6 203 aa8.5□□□□□ -1.05
NUP98-204ENST00000397004 KRTAP13-1Q8IUC0 172 aa8.49□□□□□ -1.05
NUP98-204ENST00000397004 Q96NJ1 140 aa8.49□□□□□ -1.05
NUP98-204ENST00000397004 MMP24-AS1A0A0U1RRL7 71 aa8.48□□□□□ -1.05
NUP98-204ENST00000397004 B9D2Q9BPU9 175 aa8.48□□□□□ -1.05
NUP98-204ENST00000397004 FBN3Q75N90 2809 aa8.48□□□□□ -1.05
NUP98-204ENST00000397004 MP68P56378 58 aa8.47□□□□□ -1.05
NUP98-204ENST00000397004 C1orf195Q5TG92 126 aa8.47□□□□□ -1.05
NUP98-204ENST00000397004 DNAH2Q9P225 4427 aa8.47□□□□□ -1.05
NUP98-204ENST00000397004 Q5VV11 94 aa8.47□□□□□ -1.05
NUP98-204ENST00000397004 H0Y9J4 135 aa8.47□□□□□ -1.05
NUP98-204ENST00000397004 DNAH17Q9UFH2 4485 aa8.45□□□□□ -1.06
NUP98-204ENST00000397004 NDUFB1O75438 58 aa8.45□□□□□ -1.06
NUP98-204ENST00000397004 Q8N9P0 234 aaPredicted RBP8.44□□□□□ -1.06
NUP98-204ENST00000397004 APLNQ9ULZ1 77 aa8.44□□□□□ -1.06
NUP98-204ENST00000397004 SPANXA2-OT1Q8N9U9 137 aa8.43□□□□□ -1.06
NUP98-204ENST00000397004 ASB16-AS1Q495Z4 193 aa8.42□□□□□ -1.06
NUP98-204ENST00000397004 VPS13DQ5THJ4 4388 aa8.41□□□□□ -1.06
NUP98-204ENST00000397004 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.41□□□□□ -1.06
NUP98-204ENST00000397004 DNHD1Q96M86 4753 aa8.41□□□□□ -1.06
NUP98-204ENST00000397004 PRKDCP78527 4128 aaKnown RBP8.4□□□□□ -1.06
NUP98-204ENST00000397004 MOBPQ13875 183 aa8.4□□□□□ -1.06
NUP98-204ENST00000397004 Q6ZRN7 208 aaPredicted RBP8.4□□□□□ -1.06
NUP98-204ENST00000397004 A0A087X002 238 aa8.39□□□□□ -1.07
NUP98-204ENST00000397004 NOTCH2NLQ7Z3S9 236 aa8.39□□□□□ -1.07
NUP98-204ENST00000397004 CD164Q04900 197 aa8.38□□□□□ -1.07
NUP98-204ENST00000397004 IGLV9-49A0A0B4J1Y8 123 aa8.38□□□□□ -1.07
NUP98-204ENST00000397004 ANAPC11Q9NYG5 84 aa8.38□□□□□ -1.07
NUP98-204ENST00000397004 ALMS1Q8TCU4 4167 aa8.36□□□□□ -1.07
NUP98-204ENST00000397004 H3BPC8 53 aa8.36□□□□□ -1.07
NUP98-204ENST00000397004 PCOTHQ58A44 107 aa8.36□□□□□ -1.07
NUP98-204ENST00000397004 DNAH6Q9C0G6 4158 aa8.36□□□□□ -1.07
NUP98-204ENST00000397004 IGLV7-46A0A075B6I9 117 aa8.35□□□□□ -1.07
NUP98-204ENST00000397004 COA5Q86WW8 74 aa8.35□□□□□ -1.07
NUP98-204ENST00000397004 UBE2DNLQ8IWF7 75 aa8.35□□□□□ -1.07
NUP98-204ENST00000397004 LCA10Q71F78 164 aa8.32□□□□□ -1.08
NUP98-204ENST00000397004 SPACA4Q8TDM5 124 aa8.32□□□□□ -1.08
NUP98-204ENST00000397004 PRR15LQ9BU68 103 aa8.31□□□□□ -1.08
NUP98-204ENST00000397004 C8orf17Q9NRJ1 99 aa8.31□□□□□ -1.08
NUP98-204ENST00000397004 WWC2-AS2Q96NR7 200 aa8.31□□□□□ -1.08
NUP98-204ENST00000397004 V9GYY9 64 aa8.31□□□□□ -1.08
NUP98-204ENST00000397004 NBDYA0A0U1RRE5 68 aa8.3□□□□□ -1.08
NUP98-204ENST00000397004 LINC00483Q53H64 154 aa8.3□□□□□ -1.08
NUP98-204ENST00000397004 Q6ZR54 194 aa8.3□□□□□ -1.08
NUP98-204ENST00000397004 C14orf177Q52M58 125 aa8.3□□□□□ -1.08
NUP98-204ENST00000397004 CHKB-CPT1BH3BT56 60 aa8.29□□□□□ -1.08
NUP98-204ENST00000397004 TGP01266 2768 aa8.29□□□□□ -1.08
NUP98-204ENST00000397004 MEGF8Q7Z7M0 2845 aa8.28□□□□□ -1.08
NUP98-204ENST00000397004 IGHV6-1A0A0B4J1U7 121 aa8.28□□□□□ -1.08
NUP98-204ENST00000397004 PMAIP1Q13794 54 aa8.28□□□□□ -1.08
NUP98-204ENST00000397004 LOC101927531A0A1B0GV80 90 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms