RNA–Protein interactions for RNA: ENST00000396027.8

XRCC4-203, Transcript of X-ray repair cross complementing 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene XRCC4, Length 1,530 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-203ENST00000396027 TRIOBPQ9H2D6 2365 aa2.12□□□□□ -2.07
XRCC4-203ENST00000396027 ANKRD17O75179 2603 aaKnown RBP2.12□□□□□ -2.07
XRCC4-203ENST00000396027 A0A087WTM6 91 aa2.12□□□□□ -2.07
XRCC4-203ENST00000396027 PANO1I0J062 215 aa2.12□□□□□ -2.07
XRCC4-203ENST00000396027 SSBP3-AS1Q7Z2R9 100 aa2.12□□□□□ -2.07
XRCC4-203ENST00000396027 NBEAQ8NFP9 2946 aa2.11□□□□□ -2.07
XRCC4-203ENST00000396027 MGAQ8IWI9 3026 aa2.11□□□□□ -2.07
XRCC4-203ENST00000396027 SPENQ96T58 3664 aaKnown RBP2.11□□□□□ -2.07
XRCC4-203ENST00000396027 A0A1W2PNN7 141 aa2.11□□□□□ -2.07
XRCC4-203ENST00000396027 COL6A3P12111 3177 aa2.11□□□□□ -2.07
XRCC4-203ENST00000396027 PKDREJQ9NTG1 2253 aa2.1□□□□□ -2.07
XRCC4-203ENST00000396027 A0A1B0GU33 70 aa2.1□□□□□ -2.07
XRCC4-203ENST00000396027 Q96NJ1 140 aa2.1□□□□□ -2.07
XRCC4-203ENST00000396027 CREBBPQ92793 2442 aa2.1□□□□□ -2.07
XRCC4-203ENST00000396027 ZFHX4Q86UP3 3567 aa2.09□□□□□ -2.07
XRCC4-203ENST00000396027 RP1L1Q8IWN7 2480 aaPredicted RBP2.09□□□□□ -2.07
XRCC4-203ENST00000396027 SMG1Q96Q15 3661 aaKnown RBP2.09□□□□□ -2.07
XRCC4-203ENST00000396027 CIRBP-AS1Q8TBR5 109 aa2.09□□□□□ -2.07
XRCC4-203ENST00000396027 DSPP15924 2871 aaKnown RBP2.09□□□□□ -2.08
XRCC4-203ENST00000396027 ZDBF2Q9HCK1 2354 aa2.09□□□□□ -2.08
XRCC4-203ENST00000396027 ACACAQ13085 2346 aa2.09□□□□□ -2.08
XRCC4-203ENST00000396027 CUL9Q8IWT3 2517 aa2.09□□□□□ -2.08
XRCC4-203ENST00000396027 VPS13AQ96RL7 3174 aa2.08□□□□□ -2.08
XRCC4-203ENST00000396027 CELSR3Q9NYQ7 3312 aa2.08□□□□□ -2.08
XRCC4-203ENST00000396027 NBDYA0A0U1RRE5 68 aa2.08□□□□□ -2.08
XRCC4-203ENST00000396027 SPTA1P02549 2419 aa2.08□□□□□ -2.08
XRCC4-203ENST00000396027 AKAP6Q13023 2319 aa2.08□□□□□ -2.08
XRCC4-203ENST00000396027 ROS1P08922 2347 aa2.07□□□□□ -2.08
XRCC4-203ENST00000396027 COL6A6A6NMZ7 2263 aa2.07□□□□□ -2.08
XRCC4-203ENST00000396027 A0A1W2PPR1 153 aa2.07□□□□□ -2.08
XRCC4-203ENST00000396027 KRTAP10-3P60369 221 aa2.07□□□□□ -2.08
XRCC4-203ENST00000396027 KRTAP24-1Q3LI83 254 aa2.07□□□□□ -2.08
XRCC4-203ENST00000396027 KRTAP13-3Q3SY46 172 aa2.07□□□□□ -2.08
XRCC4-203ENST00000396027 CACNA1HO95180 2353 aa2.06□□□□□ -2.08
XRCC4-203ENST00000396027 PCNX1Q96RV3 2341 aa2.06□□□□□ -2.08
XRCC4-203ENST00000396027 PRRC2CQ9Y520 2896 aaKnown RBP2.06□□□□□ -2.08
XRCC4-203ENST00000396027 NCOR1O75376 2440 aa2.06□□□□□ -2.08
XRCC4-203ENST00000396027 SPART-AS1P0CW21 52 aa2.06□□□□□ -2.08
XRCC4-203ENST00000396027 RPL37P61927 97 aaKnown RBP2.06□□□□□ -2.08
XRCC4-203ENST00000396027 ZZEF1O43149 2961 aa2.05□□□□□ -2.08
XRCC4-203ENST00000396027 DEFB130BP0DP73 79 aa2.05□□□□□ -2.08
XRCC4-203ENST00000396027 DEFB130AP0DP74 79 aa2.05□□□□□ -2.08
XRCC4-203ENST00000396027 LINC01556Q5JQF7 62 aa2.05□□□□□ -2.08
XRCC4-203ENST00000396027 BRD3OSQ6XYD6 125 aa2.05□□□□□ -2.08
XRCC4-203ENST00000396027 PTPRZ1P23471 2315 aaPredicted RBP2.04□□□□□ -2.08
XRCC4-203ENST00000396027 WDFY4Q6ZS81 3184 aa2.04□□□□□ -2.08
XRCC4-203ENST00000396027 KRTAP10-8P60410 259 aa2.04□□□□□ -2.08
XRCC4-203ENST00000396027 H1FX-AS1Q4G0G2 97 aa2.04□□□□□ -2.08
XRCC4-203ENST00000396027 Q6ZSA8 131 aa2.04□□□□□ -2.08
XRCC4-203ENST00000396027 BSNQ9UPA5 3926 aa2.04□□□□□ -2.08
XRCC4-203ENST00000396027 C2CD3Q4AC94 2353 aa2.04□□□□□ -2.08
XRCC4-203ENST00000396027 LOC400499M0QZD8 3231 aa2.04□□□□□ -2.08
XRCC4-203ENST00000396027 BDP1A6H8Y1 2624 aa2.03□□□□□ -2.08
XRCC4-203ENST00000396027 ASPMQ8IZT6 3477 aa2.03□□□□□ -2.08
XRCC4-203ENST00000396027 LAMA5O15230 3695 aa2.03□□□□□ -2.08
XRCC4-203ENST00000396027 H0YAA0 97 aa2.03□□□□□ -2.08
XRCC4-203ENST00000396027 GIG44P09565 113 aaPredicted RBP2.03□□□□□ -2.08
XRCC4-203ENST00000396027 C14orf177Q52M58 125 aa2.03□□□□□ -2.08
XRCC4-203ENST00000396027 PLAC4Q8WY50 150 aa2.03□□□□□ -2.08
XRCC4-203ENST00000396027 OTOGLQ3ZCN5 2332 aa2.03□□□□□ -2.08
XRCC4-203ENST00000396027 EP300Q09472 2414 aaPredicted RBP2.03□□□□□ -2.08
XRCC4-203ENST00000396027 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.08
XRCC4-203ENST00000396027 ALMS1Q8TCU4 4167 aa2.03□□□□□ -2.08
XRCC4-203ENST00000396027 MUC3AQ02505 3323 aa2.03□□□□□ -2.09
XRCC4-203ENST00000396027 PRO2289Q9P1D8 64 aa2.02□□□□□ -2.09
XRCC4-203ENST00000396027 AKAP13Q12802 2813 aa2.02□□□□□ -2.09
XRCC4-203ENST00000396027 KALRNO60229 2985 aa2.02□□□□□ -2.09
XRCC4-203ENST00000396027 C10orf99Q6UWK7 81 aa2.01□□□□□ -2.09
XRCC4-203ENST00000396027 ANKHD1Q8IWZ3 2542 aaKnown RBP2.01□□□□□ -2.09
XRCC4-203ENST00000396027 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.01□□□□□ -2.095e-6■■■■□ 22.8
XRCC4-203ENST00000396027 DMXL2Q8TDJ6 3036 aa2.01□□□□□ -2.09
XRCC4-203ENST00000396027 A0A1B0GVY2 172 aa2.01□□□□□ -2.09
XRCC4-203ENST00000396027 CFAP47Q6ZTR5 3102 aa2.01□□□□□ -2.09
XRCC4-203ENST00000396027 A0A096LPF7 62 aa2□□□□□ -2.09
XRCC4-203ENST00000396027 INE1O15225 51 aa2□□□□□ -2.09
XRCC4-203ENST00000396027 CSMD1Q96PZ7 3565 aa2□□□□□ -2.09
XRCC4-203ENST00000396027 BOD1L1Q8NFC6 3051 aa2□□□□□ -2.09
XRCC4-203ENST00000396027 ZNF292O60281 2723 aa2□□□□□ -2.09
XRCC4-203ENST00000396027 DCHS2Q6V1P9 2916 aa1.99□□□□□ -2.09
XRCC4-203ENST00000396027 ANKRD11Q6UB99 2663 aaPredicted RBP1.99□□□□□ -2.09
XRCC4-203ENST00000396027 TACC2O95359 2948 aa1.99□□□□□ -2.09
XRCC4-203ENST00000396027 LCE1CQ5T751 118 aa1.99□□□□□ -2.09
XRCC4-203ENST00000396027 LCE1BQ5T7P3 118 aa1.99□□□□□ -2.09
XRCC4-203ENST00000396027 KRTAP5-5Q701N2 237 aaPredicted RBP1.99□□□□□ -2.09
XRCC4-203ENST00000396027 ZFHX2Q9C0A1 2572 aaPredicted RBP1.99□□□□□ -2.09
XRCC4-203ENST00000396027 ADGRG4Q8IZF6 3080 aa1.99□□□□□ -2.09
XRCC4-203ENST00000396027 PIEZO2Q9H5I5 2752 aa1.99□□□□□ -2.09
XRCC4-203ENST00000396027 SPTAN1Q13813 2472 aaKnown RBP1.99□□□□□ -2.09
XRCC4-203ENST00000396027 CSPG4Q6UVK1 2322 aa1.99□□□□□ -2.09
XRCC4-203ENST00000396027 DMXL1Q9Y485 3027 aa1.98□□□□□ -2.09
XRCC4-203ENST00000396027 SVEP1Q4LDE5 3571 aa1.98□□□□□ -2.09
XRCC4-203ENST00000396027 DEFB136Q30KP8 78 aa1.98□□□□□ -2.09
XRCC4-203ENST00000396027 LRBAP50851 2863 aa1.98□□□□□ -2.09
XRCC4-203ENST00000396027 GVINP1Q7Z2Y8 2422 aa1.98□□□□□ -2.09
XRCC4-203ENST00000396027 HRNRQ86YZ3 2850 aaPredicted RBP1.98□□□□□ -2.09
XRCC4-203ENST00000396027 K7EIL1 84 aa1.97□□□□□ -2.09
XRCC4-203ENST00000396027 PP632Q6XCG6 107 aa1.97□□□□□ -2.09
XRCC4-203ENST00000396027 ATMQ13315 3056 aa1.97□□□□□ -2.09
XRCC4-203ENST00000396027 TTC28Q96AY4 2481 aa1.96□□□□□ -2.1
XRCC4-203ENST00000396027 PRLHP81277 87 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms