RNA–Protein interactions for RNA: ENST00000395715.7

TRPS1-203, Transcript of transcriptional repressor GATA binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRPS1, Length 9,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-203ENST00000395715 CENPFP49454 3210 aa4.82□□□□□ -1.64
TRPS1-203ENST00000395715 DMBT1Q9UGM3 2413 aaPredicted RBP4.81□□□□□ -1.64
TRPS1-203ENST00000395715 EP400Q96L91 3159 aa4.81□□□□□ -1.64
TRPS1-203ENST00000395715 PANO1I0J062 215 aa4.8□□□□□ -1.64
TRPS1-203ENST00000395715 Q5VSD8 79 aa4.8□□□□□ -1.64
TRPS1-203ENST00000395715 C10orf142B7Z368 130 aa4.78□□□□□ -1.64
TRPS1-203ENST00000395715 KRTAP26-1Q6PEX3 210 aa4.78□□□□□ -1.64
TRPS1-203ENST00000395715 A8MU10 97 aa4.78□□□□□ -1.64
TRPS1-203ENST00000395715 FASNP49327 2511 aaKnown RBP4.77□□□□□ -1.65
TRPS1-203ENST00000395715 USP9YO00507 2555 aaPredicted RBP4.76□□□□□ -1.65
TRPS1-203ENST00000395715 A8MUU9 505 aa4.76□□□□□ -1.65
TRPS1-203ENST00000395715 SPRR1AP35321 89 aa4.74□□□□□ -1.65
TRPS1-203ENST00000395715 TNP1P09430 55 aa4.73□□□□□ -1.65
TRPS1-203ENST00000395715 PLAC8Q9NZF1 115 aa4.73□□□□□ -1.65
TRPS1-203ENST00000395715 PRRC2CQ9Y520 2896 aaKnown RBP4.72□□□□□ -1.65
TRPS1-203ENST00000395715 PP632Q6XCG6 107 aa4.72□□□□□ -1.65
TRPS1-203ENST00000395715 SPRR1BP22528 89 aa4.71□□□□□ -1.66
TRPS1-203ENST00000395715 GOLGB1Q14789 3259 aaKnown RBP4.7□□□□□ -1.66
TRPS1-203ENST00000395715 A0A087X002 238 aa4.68□□□□□ -1.66
TRPS1-203ENST00000395715 KRTAP11-1Q8IUC1 163 aa4.67□□□□□ -1.66
TRPS1-203ENST00000395715 KRTAP4-16G5E9R7 235 aaPredicted RBP4.65□□□□□ -1.67
TRPS1-203ENST00000395715 KRTAP1-3Q8IUG1 177 aa4.64□□□□□ -1.67
TRPS1-203ENST00000395715 KRTAP29-1A8MX34 341 aaPredicted RBP4.64□□□□□ -1.67
TRPS1-203ENST00000395715 P0C880 135 aa4.64□□□□□ -1.67
TRPS1-203ENST00000395715 CENPEQ02224 2701 aa4.63□□□□□ -1.67
TRPS1-203ENST00000395715 NBEAL1Q6ZS30 2694 aa4.61□□□□□ -1.67
TRPS1-203ENST00000395715 KRTAP1-1Q07627 177 aa4.6□□□□□ -1.67
TRPS1-203ENST00000395715 C5orf42Q9H799 3197 aa4.58□□□□□ -1.68
TRPS1-203ENST00000395715 DNAH12Q6ZR08 3092 aa4.58□□□□□ -1.68
TRPS1-203ENST00000395715 AKAP13Q12802 2813 aa4.58□□□□□ -1.68
TRPS1-203ENST00000395715 LCE6AA0A183 80 aa4.57□□□□□ -1.68
TRPS1-203ENST00000395715 CFAP46Q8IYW2 2715 aa4.56□□□□□ -1.68
TRPS1-203ENST00000395715 STAB1Q9NY15 2570 aa4.56□□□□□ -1.68
TRPS1-203ENST00000395715 MGAM2Q2M2H8 2515 aa4.56□□□□□ -1.68
TRPS1-203ENST00000395715 KRTAP10-1P60331 282 aa4.56□□□□□ -1.68
TRPS1-203ENST00000395715 TRANK1O15050 2925 aa4.55□□□□□ -1.68
TRPS1-203ENST00000395715 STAB2Q8WWQ8 2551 aa4.55□□□□□ -1.68
TRPS1-203ENST00000395715 CEP350Q5VT06 3117 aa4.55□□□□□ -1.68
TRPS1-203ENST00000395715 NOTCH2NLQ7Z3S9 236 aa4.53□□□□□ -1.68
TRPS1-203ENST00000395715 KRTAP10-2P60368 255 aa4.53□□□□□ -1.68
TRPS1-203ENST00000395715 CEP295Q9C0D2 2601 aa4.52□□□□□ -1.69
TRPS1-203ENST00000395715 HECTD1Q9ULT8 2610 aa4.51□□□□□ -1.69
TRPS1-203ENST00000395715 NOTCH1P46531 2555 aa4.5□□□□□ -1.69
TRPS1-203ENST00000395715 KRTAP10-8P60410 259 aa4.48□□□□□ -1.69
TRPS1-203ENST00000395715 ITPR3Q14573 2671 aa4.47□□□□□ -1.69
TRPS1-203ENST00000395715 UTRNP46939 3433 aa4.46□□□□□ -1.7
TRPS1-203ENST00000395715 FLNAP21333 2647 aaKnown RBP4.46□□□□□ -1.7
TRPS1-203ENST00000395715 RPS29P62273 56 aaKnown RBP4.44□□□□□ -1.7
TRPS1-203ENST00000395715 KRTAP1-5Q9BYS1 174 aa4.44□□□□□ -1.7
TRPS1-203ENST00000395715 PCNTO95613 3336 aa4.43□□□□□ -1.7
TRPS1-203ENST00000395715 ATRQ13535 2644 aa4.42□□□□□ -1.7
TRPS1-203ENST00000395715 MAST4O15021 2626 aa4.4□□□□□ -1.7
TRPS1-203ENST00000395715 HELZ2Q9BYK8 2649 aaKnown RBP4.39□□□□□ -1.71
TRPS1-203ENST00000395715 H0YAA0 97 aa4.39□□□□□ -1.71
TRPS1-203ENST00000395715 CHD6Q8TD26 2715 aa4.38□□□□□ -1.71
TRPS1-203ENST00000395715 FLNBO75369 2602 aaKnown RBP4.38□□□□□ -1.71
TRPS1-203ENST00000395715 A0A0C4DFX4 3053 aa4.36□□□□□ -1.71
TRPS1-203ENST00000395715 TEX15Q9BXT5 2789 aa4.36□□□□□ -1.71
TRPS1-203ENST00000395715 CFAP54Q96N23 3096 aa4.35□□□□□ -1.71
TRPS1-203ENST00000395715 Q6ZRN7 208 aaPredicted RBP4.34□□□□□ -1.72
TRPS1-203ENST00000395715 CHD9Q3L8U1 2897 aa4.33□□□□□ -1.72
TRPS1-203ENST00000395715 NSD1Q96L73 2696 aaPredicted RBP4.33□□□□□ -1.72
TRPS1-203ENST00000395715 PRO2289Q9P1D8 64 aa4.32□□□□□ -1.72
TRPS1-203ENST00000395715 BAHCC1Q9P281 2608 aa4.32□□□□□ -1.72
TRPS1-203ENST00000395715 XIRP2A4UGR9 3374 aa4.31□□□□□ -1.72
TRPS1-203ENST00000395715 REV3LO60673 3130 aa4.31□□□□□ -1.72
TRPS1-203ENST00000395715 UNC79Q9P2D8 2635 aa4.31□□□□□ -1.72
TRPS1-203ENST00000395715 ZNF292O60281 2723 aa4.3□□□□□ -1.72
TRPS1-203ENST00000395715 COL6A5A8TX70 2615 aa4.3□□□□□ -1.72
TRPS1-203ENST00000395715 KMT2BQ9UMN6 2715 aaPredicted RBP4.29□□□□□ -1.72
TRPS1-203ENST00000395715 FREM2Q5SZK8 3169 aa4.28□□□□□ -1.72
TRPS1-203ENST00000395715 IGSF10Q6WRI0 2623 aa4.28□□□□□ -1.72
TRPS1-203ENST00000395715 CHD7Q9P2D1 2997 aa4.28□□□□□ -1.72
TRPS1-203ENST00000395715 GCN1Q92616 2671 aaKnown RBP4.27□□□□□ -1.73
TRPS1-203ENST00000395715 A0A1B0GVY2 172 aa4.27□□□□□ -1.73
TRPS1-203ENST00000395715 HTTP42858 3142 aa4.25□□□□□ -1.73
TRPS1-203ENST00000395715 LAMA2P24043 3122 aaKnown RBP4.24□□□□□ -1.73
TRPS1-203ENST00000395715 KRTAP13-2Q52LG2 175 aa4.24□□□□□ -1.73
TRPS1-203ENST00000395715 APCP25054 2843 aa4.23□□□□□ -1.73
TRPS1-203ENST00000395715 CELSR3Q9NYQ7 3312 aa4.23□□□□□ -1.73
TRPS1-203ENST00000395715 MKI67P46013 3256 aaKnown RBP4.22□□□□□ -1.73
TRPS1-203ENST00000395715 ITPR2Q14571 2701 aa4.21□□□□□ -1.74
TRPS1-203ENST00000395715 KRTAP12-2P59991 146 aa4.2□□□□□ -1.74
TRPS1-203ENST00000395715 CRYBG3Q68DQ2 2970 aa4.19□□□□□ -1.74
TRPS1-203ENST00000395715 TEP1Q99973 2627 aaKnown RBP4.18□□□□□ -1.74
TRPS1-203ENST00000395715 KRTAP13-1Q8IUC0 172 aa4.17□□□□□ -1.74
TRPS1-203ENST00000395715 INE1O15225 51 aa4.17□□□□□ -1.74
TRPS1-203ENST00000395715 TRIOO75962 3097 aa4.17□□□□□ -1.74
TRPS1-203ENST00000395715 WDFY4Q6ZS81 3184 aa4.16□□□□□ -1.74
TRPS1-203ENST00000395715 KRTAP10-10P60014 251 aa4.16□□□□□ -1.74
TRPS1-203ENST00000395715 DSPP15924 2871 aaKnown RBP4.16□□□□□ -1.74
TRPS1-203ENST00000395715 UBR5O95071 2799 aaPredicted RBP4.15□□□□□ -1.74
TRPS1-203ENST00000395715 MGAQ8IWI9 3026 aa4.15□□□□□ -1.75
TRPS1-203ENST00000395715 KRTAP7-1Q8IUC3 87 aa4.14□□□□□ -1.75
TRPS1-203ENST00000395715 UNC80Q8N2C7 3258 aa4.14□□□□□ -1.75
TRPS1-203ENST00000395715 NBEAL2Q6ZNJ1 2754 aa4.14□□□□□ -1.75
TRPS1-203ENST00000395715 SETXQ7Z333 2677 aaKnown RBP4.13□□□□□ -1.75
TRPS1-203ENST00000395715 UTP20O75691 2785 aaKnown RBP4.13□□□□□ -1.75
TRPS1-203ENST00000395715 FRYQ5TBA9 3013 aa4.13□□□□□ -1.75
TRPS1-203ENST00000395715 RANBP2P49792 3224 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms