RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 HRCT1Q6UXD1 115 aa8.48□□□□□ -1.05
GTF2F1-201ENST00000394456 HIGD2AQ9BW72 106 aa8.48□□□□□ -1.05
GTF2F1-201ENST00000394456 NUPR2A6NF83 97 aa8.47□□□□□ -1.05
GTF2F1-201ENST00000394456 DSCR10P59022 87 aa8.47□□□□□ -1.05
GTF2F1-201ENST00000394456 K7EQZ3 153 aa8.47□□□□□ -1.05
GTF2F1-201ENST00000394456 PHF5AQ7RTV0 110 aaKnown RBP8.46□□□□□ -1.06
GTF2F1-201ENST00000394456 EPM2AB3EWF7 344 aa8.45□□□□□ -1.06
GTF2F1-201ENST00000394456 IGFL1Q6UW32 110 aa8.45□□□□□ -1.06
GTF2F1-201ENST00000394456 NBDYA0A0U1RRE5 68 aa8.44□□□□□ -1.06
GTF2F1-201ENST00000394456 SPRR4Q96PI1 79 aa8.44□□□□□ -1.06
GTF2F1-201ENST00000394456 CNBPP62633 177 aaKnown RBP8.43□□□□□ -1.06
GTF2F1-201ENST00000394456 A0A0U1RQV1 116 aa8.42□□□□□ -1.06
GTF2F1-201ENST00000394456 C16orf90A8MZG2 172 aa8.42□□□□□ -1.06
GTF2F1-201ENST00000394456 PANO1I0J062 215 aa8.42□□□□□ -1.06
GTF2F1-201ENST00000394456 LINC00474Q9P2X8 69 aa8.42□□□□□ -1.06
GTF2F1-201ENST00000394456 SERP1Q9Y6X1 66 aa8.42□□□□□ -1.06
GTF2F1-201ENST00000394456 RPL37AP61513 92 aaKnown RBP8.41□□□□□ -1.06
GTF2F1-201ENST00000394456 VPS13DQ5THJ4 4388 aa8.4□□□□□ -1.06
GTF2F1-201ENST00000394456 A0A087WSZ3 146 aa8.39□□□□□ -1.07
GTF2F1-201ENST00000394456 FAM229BQ4G0N7 80 aa8.39□□□□□ -1.07
GTF2F1-201ENST00000394456 LRCOL1A6NCL2 159 aa8.39□□□□□ -1.07
GTF2F1-201ENST00000394456 FP248Q71RG6 208 aaPredicted RBP8.39□□□□□ -1.07
GTF2F1-201ENST00000394456 FBN3Q75N90 2809 aa8.39□□□□□ -1.07
GTF2F1-201ENST00000394456 C14orf177Q52M58 125 aa8.38□□□□□ -1.07
GTF2F1-201ENST00000394456 Q6ZRN7 208 aaPredicted RBP8.38□□□□□ -1.07
GTF2F1-201ENST00000394456 KMT2AQ03164 3969 aa8.37□□□□□ -1.07
GTF2F1-201ENST00000394456 WFDC13Q8IUB5 93 aa8.36□□□□□ -1.07
GTF2F1-201ENST00000394456 UBE2AP49459 152 aa8.35□□□□□ -1.07
GTF2F1-201ENST00000394456 C5orf47Q569G3 176 aa8.35□□□□□ -1.07
GTF2F1-201ENST00000394456 NDUFC1O43677 76 aa8.34□□□□□ -1.07
GTF2F1-201ENST00000394456 C9orf163Q8N9P6 203 aa8.34□□□□□ -1.07
GTF2F1-201ENST00000394456 A0A1B0GW54 56 aa8.31□□□□□ -1.08
GTF2F1-201ENST00000394456 HCG22E2RYF7 251 aa8.31□□□□□ -1.08
GTF2F1-201ENST00000394456 PRR4Q16378 134 aa8.31□□□□□ -1.08
GTF2F1-201ENST00000394456 DNAH2Q9P225 4427 aa8.3□□□□□ -1.08
GTF2F1-201ENST00000394456 FRAS1Q86XX4 4008 aa8.29□□□□□ -1.08
GTF2F1-201ENST00000394456 IGLV8-61A0A075B6I0 122 aa8.29□□□□□ -1.08
GTF2F1-201ENST00000394456 LCE6AA0A183 80 aa8.29□□□□□ -1.08
GTF2F1-201ENST00000394456 MPLKIPQ8TAP9 179 aa8.29□□□□□ -1.08
GTF2F1-201ENST00000394456 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.28□□□□□ -1.08
GTF2F1-201ENST00000394456 A0A087WTM6 91 aa8.27□□□□□ -1.09
GTF2F1-201ENST00000394456 SMIM26A0A096LP01 95 aa8.27□□□□□ -1.09
GTF2F1-201ENST00000394456 HECTD4Q9Y4D8 3996 aa8.26□□□□□ -1.09
GTF2F1-201ENST00000394456 LINC00336Q6ZUF6 198 aa8.26□□□□□ -1.09
GTF2F1-201ENST00000394456 ZCCHC13Q8WW36 166 aaKnown RBP8.26□□□□□ -1.09
GTF2F1-201ENST00000394456 Q6ZR54 194 aa8.24□□□□□ -1.09
GTF2F1-201ENST00000394456 LY6G6CO95867 125 aa8.23□□□□□ -1.09
GTF2F1-201ENST00000394456 IGLV9-49A0A0B4J1Y8 123 aa8.22□□□□□ -1.09
GTF2F1-201ENST00000394456 ATP5EP56381 51 aaPredicted RBP8.22□□□□□ -1.09
GTF2F1-201ENST00000394456 ANAPC11Q9NYG5 84 aa8.22□□□□□ -1.09
GTF2F1-201ENST00000394456 KRTAP29-1A8MX34 341 aaPredicted RBP8.21□□□□□ -1.09
GTF2F1-201ENST00000394456 RTL8CO15255 209 aa8.21□□□□□ -1.09
GTF2F1-201ENST00000394456 SPRR1BP22528 89 aa8.21□□□□□ -1.09
GTF2F1-201ENST00000394456 KRTAP13-1Q8IUC0 172 aa8.21□□□□□ -1.09
GTF2F1-201ENST00000394456 SPACA4Q8TDM5 124 aa8.21□□□□□ -1.1
GTF2F1-201ENST00000394456 LINC00472Q9H8W2 130 aa8.21□□□□□ -1.1
GTF2F1-201ENST00000394456 DNAH8Q96JB1 4490 aa8.21□□□□□ -1.1
GTF2F1-201ENST00000394456 PKIGQ9Y2B9 76 aa8.2□□□□□ -1.1
GTF2F1-201ENST00000394456 C1orf64Q8NEQ6 169 aa8.2□□□□□ -1.1
GTF2F1-201ENST00000394456 DNAH17Q9UFH2 4485 aa8.19□□□□□ -1.1
GTF2F1-201ENST00000394456 H0Y9J4 135 aa8.19□□□□□ -1.1
GTF2F1-201ENST00000394456 C1orf134Q5TEV5 83 aa8.18□□□□□ -1.1
GTF2F1-201ENST00000394456 PRR15Q8IV56 129 aa8.18□□□□□ -1.1
GTF2F1-201ENST00000394456 LINC00208Q96KT6 92 aa8.18□□□□□ -1.1
GTF2F1-201ENST00000394456 CASC2Q6XLA1 102 aa8.18□□□□□ -1.1
GTF2F1-201ENST00000394456 hDV103S1A0JD37 113 aa8.17□□□□□ -1.1
GTF2F1-201ENST00000394456 A8MWP4 228 aa8.15□□□□□ -1.1
GTF2F1-201ENST00000394456 IGLV5-52A0A0A0MRZ9 124 aa8.14□□□□□ -1.11
GTF2F1-201ENST00000394456 H0Y9P7 68 aa8.13□□□□□ -1.11
GTF2F1-201ENST00000394456 Q96NJ1 140 aa8.13□□□□□ -1.11
GTF2F1-201ENST00000394456 MOBPQ13875 183 aa8.12□□□□□ -1.11
GTF2F1-201ENST00000394456 DNAH6Q9C0G6 4158 aa8.12□□□□□ -1.11
GTF2F1-201ENST00000394456 TRAV22A0A0B4J277 110 aa8.12□□□□□ -1.11
GTF2F1-201ENST00000394456 MMP24-AS1A0A0U1RRL7 71 aa8.12□□□□□ -1.11
GTF2F1-201ENST00000394456 PSORS1C2Q9UIG4 136 aa8.12□□□□□ -1.11
GTF2F1-201ENST00000394456 WWC2-AS2Q96NR7 200 aa8.11□□□□□ -1.11
GTF2F1-201ENST00000394456 MP68P56378 58 aa8.1□□□□□ -1.11
GTF2F1-201ENST00000394456 BRK1Q8WUW1 75 aa8.09□□□□□ -1.11
GTF2F1-201ENST00000394456 HYDINQ4G0P3 5121 aa8.09□□□□□ -1.11
GTF2F1-201ENST00000394456 KRTAP21-3Q3LHN1 58 aa8.08□□□□□ -1.12
GTF2F1-201ENST00000394456 A0A087X002 238 aa8.07□□□□□ -1.12
GTF2F1-201ENST00000394456 NOTCH2NLQ7Z3S9 236 aa8.07□□□□□ -1.12
GTF2F1-201ENST00000394456 KRTAP10-2P60368 255 aa8.07□□□□□ -1.12
GTF2F1-201ENST00000394456 PLAC8Q9NZF1 115 aa8.07□□□□□ -1.12
GTF2F1-201ENST00000394456 DNAH5Q8TE73 4624 aa8.06□□□□□ -1.12
GTF2F1-201ENST00000394456 PSPHP1O15172 72 aa8.06□□□□□ -1.12
GTF2F1-201ENST00000394456 PRO0628Q9UI54 55 aa8.05□□□□□ -1.12
GTF2F1-201ENST00000394456 DNAH11Q96DT5 4516 aa8.05□□□□□ -1.12
GTF2F1-201ENST00000394456 IGHV6-1A0A0B4J1U7 121 aa8.04□□□□□ -1.12
GTF2F1-201ENST00000394456 CYP4F30PQ9H0H9 118 aa8.04□□□□□ -1.12
GTF2F1-201ENST00000394456 LINC00483Q53H64 154 aa8.03□□□□□ -1.12
GTF2F1-201ENST00000394456 ALMS1Q8TCU4 4167 aa8.03□□□□□ -1.12
GTF2F1-201ENST00000394456 PCOTHQ58A44 107 aa8.02□□□□□ -1.12
GTF2F1-201ENST00000394456 NDUFB1O75438 58 aa8□□□□□ -1.13
GTF2F1-201ENST00000394456 C8orf17Q9NRJ1 99 aa8□□□□□ -1.13
GTF2F1-201ENST00000394456 PKD1P98161 4303 aa7.99□□□□□ -1.13
GTF2F1-201ENST00000394456 FAT2Q9NYQ8 4349 aa7.99□□□□□ -1.13
GTF2F1-201ENST00000394456 NDUFS5O43920 106 aa7.99□□□□□ -1.13
GTF2F1-201ENST00000394456 ZNF861PO60384 105 aa7.99□□□□□ -1.13
GTF2F1-201ENST00000394456 SPINK6Q6UWN8 80 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 141.3 ms