RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 IGLV5-52A0A0A0MRZ9 124 aa6.94□□□□□ -1.3
TCOF1-203ENST00000394269 LINC00476Q8WZB0 136 aa6.94□□□□□ -1.3
TCOF1-203ENST00000394269 IGLV5-48A0A075B6I7 105 aa6.94□□□□□ -1.3
TCOF1-203ENST00000394269 BPY2O14599 106 aa6.94□□□□□ -1.3
TCOF1-203ENST00000394269 DYNC2H1Q8NCM8 4307 aaKnown RBP6.93□□□□□ -1.3
TCOF1-203ENST00000394269 SMIM29Q86T20 159 aa6.92□□□□□ -1.3
TCOF1-203ENST00000394269 TNP2Q05952 138 aa6.92□□□□□ -1.3
TCOF1-203ENST00000394269 Q6ZR54 194 aa6.91□□□□□ -1.3
TCOF1-203ENST00000394269 IGLV9-49A0A0B4J1Y8 123 aa6.91□□□□□ -1.3
TCOF1-203ENST00000394269 OXTP01178 125 aa6.91□□□□□ -1.3
TCOF1-203ENST00000394269 CRYGAP11844 174 aa6.91□□□□□ -1.3
TCOF1-203ENST00000394269 VPS13DQ5THJ4 4388 aa6.9□□□□□ -1.3
TCOF1-203ENST00000394269 Q8NBF4 154 aa6.9□□□□□ -1.3
TCOF1-203ENST00000394269 A0A087WSZ3 146 aa6.9□□□□□ -1.31
TCOF1-203ENST00000394269 IGFL1Q6UW32 110 aa6.9□□□□□ -1.31
TCOF1-203ENST00000394269 SPACA4Q8TDM5 124 aa6.9□□□□□ -1.31
TCOF1-203ENST00000394269 ANAPC11Q9NYG5 84 aa6.9□□□□□ -1.31
TCOF1-203ENST00000394269 CXCL6P80162 114 aa6.89□□□□□ -1.31
TCOF1-203ENST00000394269 SERP2Q8N6R1 65 aa6.89□□□□□ -1.31
TCOF1-203ENST00000394269 HRCT1Q6UXD1 115 aa6.89□□□□□ -1.31
TCOF1-203ENST00000394269 DNAH2Q9P225 4427 aa6.89□□□□□ -1.31
TCOF1-203ENST00000394269 BCE1O60756 84 aa6.88□□□□□ -1.31
TCOF1-203ENST00000394269 H3BS24 57 aa6.88□□□□□ -1.31
TCOF1-203ENST00000394269 C20orf197Q8N268 126 aa6.87□□□□□ -1.31
TCOF1-203ENST00000394269 DMBT1Q9UGM3 2413 aaPredicted RBP6.87□□□□□ -1.31
TCOF1-203ENST00000394269 J3KT08 172 aa6.87□□□□□ -1.31
TCOF1-203ENST00000394269 PSORS1C2Q9UIG4 136 aa6.86□□□□□ -1.31
TCOF1-203ENST00000394269 C4orf26Q17RF5 130 aa6.85□□□□□ -1.31
TCOF1-203ENST00000394269 KRTAP10-2P60368 255 aa6.85□□□□□ -1.31
TCOF1-203ENST00000394269 SNURFQ9Y675 71 aa6.84□□□□□ -1.31
TCOF1-203ENST00000394269 HECTD4Q9Y4D8 3996 aa6.84□□□□□ -1.32
TCOF1-203ENST00000394269 RPL37AP61513 92 aaKnown RBP6.83□□□□□ -1.32
TCOF1-203ENST00000394269 IGKV4-1P06312 121 aa6.83□□□□□ -1.32
TCOF1-203ENST00000394269 FAM30AQ9NZY2 134 aa6.82□□□□□ -1.32
TCOF1-203ENST00000394269 FRAS1Q86XX4 4008 aa6.82□□□□□ -1.32
TCOF1-203ENST00000394269 K7EQZ3 153 aa6.81□□□□□ -1.32
TCOF1-203ENST00000394269 SPRR4Q96PI1 79 aa6.81□□□□□ -1.32
TCOF1-203ENST00000394269 SMR3BP02814 79 aaPredicted RBP6.81□□□□□ -1.32
TCOF1-203ENST00000394269 H0Y9J4 135 aa6.8□□□□□ -1.32
TCOF1-203ENST00000394269 DNAH6Q9C0G6 4158 aa6.79□□□□□ -1.32
TCOF1-203ENST00000394269 WFDC13Q8IUB5 93 aa6.79□□□□□ -1.32
TCOF1-203ENST00000394269 HYDINQ4G0P3 5121 aa6.79□□□□□ -1.32
TCOF1-203ENST00000394269 DSCR10P59022 87 aa6.78□□□□□ -1.32
TCOF1-203ENST00000394269 MOBPQ13875 183 aa6.78□□□□□ -1.32
TCOF1-203ENST00000394269 CIRBP-AS1Q8TBR5 109 aa6.78□□□□□ -1.32
TCOF1-203ENST00000394269 TRAV7A0A075B6U4 112 aa6.78□□□□□ -1.32
TCOF1-203ENST00000394269 PLAC8Q9NZF1 115 aa6.78□□□□□ -1.32
TCOF1-203ENST00000394269 KRTAP21-3Q3LHN1 58 aa6.77□□□□□ -1.33
TCOF1-203ENST00000394269 KRTAP13-1Q8IUC0 172 aa6.77□□□□□ -1.33
TCOF1-203ENST00000394269 DNAH11Q96DT5 4516 aa6.77□□□□□ -1.33
TCOF1-203ENST00000394269 KMT2CQ8NEZ4 4911 aaKnown RBP6.76□□□□□ -1.33
TCOF1-203ENST00000394269 ZNF861PO60384 105 aa6.76□□□□□ -1.33
TCOF1-203ENST00000394269 A0A0U1RQV1 116 aa6.75□□□□□ -1.33
TCOF1-203ENST00000394269 TMEM258P61165 79 aa6.74□□□□□ -1.33
TCOF1-203ENST00000394269 A0A1B0GW54 56 aa6.74□□□□□ -1.33
TCOF1-203ENST00000394269 SPRR1BP22528 89 aa6.74□□□□□ -1.33
TCOF1-203ENST00000394269 IGLV8-61A0A075B6I0 122 aa6.73□□□□□ -1.33
TCOF1-203ENST00000394269 KRTAP10-1P60331 282 aa6.73□□□□□ -1.33
TCOF1-203ENST00000394269 DNAH17Q9UFH2 4485 aa6.73□□□□□ -1.33
TCOF1-203ENST00000394269 H7BZZ5 65 aa6.73□□□□□ -1.33
TCOF1-203ENST00000394269 RPS28P62857 69 aaKnown RBP6.72□□□□□ -1.33
TCOF1-203ENST00000394269 Q5XG85 94 aa6.72□□□□□ -1.33
TCOF1-203ENST00000394269 IGLV7-43P04211 117 aa6.72□□□□□ -1.33
TCOF1-203ENST00000394269 ZNF706Q9Y5V0 76 aaPredicted RBP6.71□□□□□ -1.33
TCOF1-203ENST00000394269 SPINK6Q6UWN8 80 aa6.71□□□□□ -1.34
TCOF1-203ENST00000394269 FAM236DA0A1B0GTK5 79 aa6.7□□□□□ -1.34
TCOF1-203ENST00000394269 FAM236CP0DP71 79 aa6.7□□□□□ -1.34
TCOF1-203ENST00000394269 DNAH8Q96JB1 4490 aa6.7□□□□□ -1.34
TCOF1-203ENST00000394269 HCG22E2RYF7 251 aa6.7□□□□□ -1.34
TCOF1-203ENST00000394269 TMEM254Q8TBM7 123 aa6.69□□□□□ -1.34
TCOF1-203ENST00000394269 OCR1Q9BZK8 76 aa6.68□□□□□ -1.34
TCOF1-203ENST00000394269 DNAH5Q8TE73 4624 aa6.67□□□□□ -1.34
TCOF1-203ENST00000394269 C1orf195Q5TG92 126 aa6.66□□□□□ -1.34
TCOF1-203ENST00000394269 LINC00472Q9H8W2 130 aa6.66□□□□□ -1.34
TCOF1-203ENST00000394269 CASC2Q6XLA1 102 aa6.65□□□□□ -1.34
TCOF1-203ENST00000394269 BRK1Q8WUW1 75 aa6.65□□□□□ -1.34
TCOF1-203ENST00000394269 IGHV6-1A0A0B4J1U7 121 aa6.65□□□□□ -1.35
TCOF1-203ENST00000394269 NDUFB1O75438 58 aa6.65□□□□□ -1.35
TCOF1-203ENST00000394269 KLKP1Q107X0 134 aa6.65□□□□□ -1.35
TCOF1-203ENST00000394269 LINC00336Q6ZUF6 198 aa6.65□□□□□ -1.35
TCOF1-203ENST00000394269 LRP1BQ9NZR2 4599 aa6.65□□□□□ -1.35
TCOF1-203ENST00000394269 CDK2AP2O75956 126 aa6.64□□□□□ -1.35
TCOF1-203ENST00000394269 PRR15Q8IV56 129 aa6.64□□□□□ -1.35
TCOF1-203ENST00000394269 LINC00483Q53H64 154 aa6.64□□□□□ -1.35
TCOF1-203ENST00000394269 A8MWP4 228 aa6.63□□□□□ -1.35
TCOF1-203ENST00000394269 A0A0A0MQY5 61 aa6.62□□□□□ -1.35
TCOF1-203ENST00000394269 NDUFS5O43920 106 aa6.62□□□□□ -1.35
TCOF1-203ENST00000394269 PRR4Q16378 134 aa6.62□□□□□ -1.35
TCOF1-203ENST00000394269 MPLKIPQ8TAP9 179 aa6.6□□□□□ -1.35
TCOF1-203ENST00000394269 A0A087X002 238 aa6.6□□□□□ -1.35
TCOF1-203ENST00000394269 FP248Q71RG6 208 aaPredicted RBP6.6□□□□□ -1.35
TCOF1-203ENST00000394269 PKHD1P08F94 4074 aa6.6□□□□□ -1.35
TCOF1-203ENST00000394269 FAM229BQ4G0N7 80 aa6.59□□□□□ -1.35
TCOF1-203ENST00000394269 LINC00208Q96KT6 92 aa6.59□□□□□ -1.36
TCOF1-203ENST00000394269 FAT2Q9NYQ8 4349 aa6.58□□□□□ -1.36
TCOF1-203ENST00000394269 hDV103S1A0JD37 113 aa6.57□□□□□ -1.36
TCOF1-203ENST00000394269 LCE6AA0A183 80 aa6.57□□□□□ -1.36
TCOF1-203ENST00000394269 Q6ZSA8 131 aa6.57□□□□□ -1.36
TCOF1-203ENST00000394269 Q96NJ1 140 aa6.57□□□□□ -1.36
TCOF1-203ENST00000394269 MP68P56378 58 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms