RNA–Protein interactions for RNA: ENST00000394023.7

SMARCC2-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-203ENST00000394023 SPRR1AP35321 89 aa11.87□□□□□ -0.51
SMARCC2-203ENST00000394023 RTL8CO15255 209 aa11.86□□□□□ -0.51
SMARCC2-203ENST00000394023 BCE1O60756 84 aa11.86□□□□□ -0.51
SMARCC2-203ENST00000394023 KRTAP7-1Q8IUC3 87 aa11.85□□□□□ -0.51
SMARCC2-203ENST00000394023 LINC00208Q96KT6 92 aa11.85□□□□□ -0.51
SMARCC2-203ENST00000394023 CASC2Q6XLA1 102 aa11.83□□□□□ -0.51
SMARCC2-203ENST00000394023 A0A1B0GW54 56 aa11.82□□□□□ -0.52
SMARCC2-203ENST00000394023 ANAPC11Q9NYG5 84 aa11.81□□□□□ -0.52
SMARCC2-203ENST00000394023 A0A087WTM6 91 aa11.8□□□□□ -0.52
SMARCC2-203ENST00000394023 KRTAP4-16G5E9R7 235 aaPredicted RBP11.8□□□□□ -0.52
SMARCC2-203ENST00000394023 MOBPQ13875 183 aa11.8□□□□□ -0.52
SMARCC2-203ENST00000394023 CIRBP-AS1Q8TBR5 109 aa11.8□□□□□ -0.52
SMARCC2-203ENST00000394023 ZNF706Q9Y5V0 76 aaPredicted RBP11.8□□□□□ -0.52
SMARCC2-203ENST00000394023 SERP1Q9Y6X1 66 aa11.8□□□□□ -0.52
SMARCC2-203ENST00000394023 H7BZZ5 65 aa11.79□□□□□ -0.52
SMARCC2-203ENST00000394023 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.78□□□□□ -0.52
SMARCC2-203ENST00000394023 IGHV6-1A0A0B4J1U7 121 aa11.78□□□□□ -0.52
SMARCC2-203ENST00000394023 KLKP1Q107X0 134 aa11.76□□□□□ -0.53
SMARCC2-203ENST00000394023 RPS28P62857 69 aaKnown RBP11.74□□□□□ -0.53
SMARCC2-203ENST00000394023 PANO1I0J062 215 aa11.74□□□□□ -0.53
SMARCC2-203ENST00000394023 DSCR10P59022 87 aa11.73□□□□□ -0.53
SMARCC2-203ENST00000394023 C4orf26Q17RF5 130 aa11.72□□□□□ -0.53
SMARCC2-203ENST00000394023 SPRR4Q96PI1 79 aa11.72□□□□□ -0.53
SMARCC2-203ENST00000394023 ATP5EP56381 51 aaPredicted RBP11.71□□□□□ -0.54
SMARCC2-203ENST00000394023 C5orf47Q569G3 176 aa11.71□□□□□ -0.54
SMARCC2-203ENST00000394023 KRTAP11-1Q8IUC1 163 aa11.71□□□□□ -0.54
SMARCC2-203ENST00000394023 H0Y9P7 68 aa11.7□□□□□ -0.54
SMARCC2-203ENST00000394023 SMIM26A0A096LP01 95 aa11.69□□□□□ -0.54
SMARCC2-203ENST00000394023 PSORS1C2Q9UIG4 136 aa11.69□□□□□ -0.54
SMARCC2-203ENST00000394023 TNP2Q05952 138 aa11.68□□□□□ -0.54
SMARCC2-203ENST00000394023 OCR1Q9BZK8 76 aa11.68□□□□□ -0.54
SMARCC2-203ENST00000394023 PCOTHQ58A44 107 aa11.66□□□□□ -0.54
SMARCC2-203ENST00000394023 TGP01266 2768 aa11.64□□□□□ -0.55
SMARCC2-203ENST00000394023 BRK1Q8WUW1 75 aa11.63□□□□□ -0.55
SMARCC2-203ENST00000394023 hDV103S1A0JD37 113 aa11.62□□□□□ -0.55
SMARCC2-203ENST00000394023 A8MWP4 228 aa11.62□□□□□ -0.55
SMARCC2-203ENST00000394023 C4orf48Q5BLP8 95 aa11.62□□□□□ -0.55
SMARCC2-203ENST00000394023 PRR15Q8IV56 129 aa11.61□□□□□ -0.55
SMARCC2-203ENST00000394023 C1orf64Q8NEQ6 169 aa11.6□□□□□ -0.55
SMARCC2-203ENST00000394023 SPACA4Q8TDM5 124 aa11.6□□□□□ -0.55
SMARCC2-203ENST00000394023 A0A0U1RQV1 116 aa11.59□□□□□ -0.55
SMARCC2-203ENST00000394023 ZNF861PO60384 105 aa11.58□□□□□ -0.56
SMARCC2-203ENST00000394023 RETNLBQ9BQ08 111 aa11.56□□□□□ -0.56
SMARCC2-203ENST00000394023 SRRM2Q9UQ35 2752 aaKnown RBP11.55□□□□□ -0.56
SMARCC2-203ENST00000394023 OXTP01178 125 aa11.54□□□□□ -0.56
SMARCC2-203ENST00000394023 Q6ZRN7 208 aaPredicted RBP11.51□□□□□ -0.57
SMARCC2-203ENST00000394023 CSMD3Q7Z407 3707 aa11.5□□□□□ -0.57
SMARCC2-203ENST00000394023 PSPHP1O15172 72 aa11.5□□□□□ -0.57
SMARCC2-203ENST00000394023 WWC2-AS2Q96NR7 200 aa11.49□□□□□ -0.57
SMARCC2-203ENST00000394023 TRAV22A0A0B4J277 110 aa11.49□□□□□ -0.57
SMARCC2-203ENST00000394023 IGLV8-61A0A075B6I0 122 aa11.47□□□□□ -0.57
SMARCC2-203ENST00000394023 IGLV7-43P04211 117 aa11.46□□□□□ -0.57
SMARCC2-203ENST00000394023 SPRR1BP22528 89 aa11.46□□□□□ -0.58
SMARCC2-203ENST00000394023 C8orf17Q9NRJ1 99 aa11.43□□□□□ -0.58
SMARCC2-203ENST00000394023 LINC00472Q9H8W2 130 aa11.42□□□□□ -0.58
SMARCC2-203ENST00000394023 PLAC8Q9NZF1 115 aa11.4□□□□□ -0.59
SMARCC2-203ENST00000394023 A0A1B0GVX0 72 aa11.38□□□□□ -0.59
SMARCC2-203ENST00000394023 CHKB-CPT1BH3BT56 60 aa11.38□□□□□ -0.59
SMARCC2-203ENST00000394023 Q6ZR54 194 aa11.37□□□□□ -0.59
SMARCC2-203ENST00000394023 TP53AIP1Q9HCN2 124 aa11.36□□□□□ -0.59
SMARCC2-203ENST00000394023 KRTAP10-2P60368 255 aa11.36□□□□□ -0.59
SMARCC2-203ENST00000394023 MRPL34Q9BQ48 92 aaKnown RBP11.36□□□□□ -0.59
SMARCC2-203ENST00000394023 FAM229BQ4G0N7 80 aa11.35□□□□□ -0.59
SMARCC2-203ENST00000394023 HUWE1Q7Z6Z7 4374 aaKnown RBP11.33□□□□□ -0.6
SMARCC2-203ENST00000394023 Q5XG85 94 aa11.33□□□□□ -0.6
SMARCC2-203ENST00000394023 MMP24-AS1A0A0U1RRL7 71 aa11.32□□□□□ -0.6
SMARCC2-203ENST00000394023 H3BPC8 53 aa11.31□□□□□ -0.6
SMARCC2-203ENST00000394023 SVIPQ8NHG7 77 aa11.31□□□□□ -0.6
SMARCC2-203ENST00000394023 COL7A1Q02388 2944 aa11.31□□□□□ -0.6
SMARCC2-203ENST00000394023 ANK2Q01484 3957 aa11.3□□□□□ -0.6
SMARCC2-203ENST00000394023 PLA2G1BP04054 148 aaKnown RBP11.3□□□□□ -0.6
SMARCC2-203ENST00000394023 LINC00336Q6ZUF6 198 aa11.3□□□□□ -0.6
SMARCC2-203ENST00000394023 PRR15LQ9BU68 103 aa11.3□□□□□ -0.6
SMARCC2-203ENST00000394023 SMR3BP02814 79 aaPredicted RBP11.29□□□□□ -0.6
SMARCC2-203ENST00000394023 FP248Q71RG6 208 aaPredicted RBP11.29□□□□□ -0.6
SMARCC2-203ENST00000394023 LINC00313P59037 77 aa11.27□□□□□ -0.6
SMARCC2-203ENST00000394023 SSBP3-AS1Q7Z2R9 100 aa11.27□□□□□ -0.6
SMARCC2-203ENST00000394023 KRTAP13-1Q8IUC0 172 aa11.26□□□□□ -0.61
SMARCC2-203ENST00000394023 TYMSOSQ8TAI1 123 aa11.26□□□□□ -0.61
SMARCC2-203ENST00000394023 V9GYY9 64 aa11.26□□□□□ -0.61
SMARCC2-203ENST00000394023 SPTSSBQ8NFR3 76 aa11.25□□□□□ -0.61
SMARCC2-203ENST00000394023 IGKV2D-30A0A075B6S6 120 aa11.23□□□□□ -0.61
SMARCC2-203ENST00000394023 IGKV2-30P06310 120 aa11.23□□□□□ -0.61
SMARCC2-203ENST00000394023 KRTAP29-1A8MX34 341 aaPredicted RBP11.23□□□□□ -0.61
SMARCC2-203ENST00000394023 KRTAP10-1P60331 282 aa11.22□□□□□ -0.61
SMARCC2-203ENST00000394023 A6NED7 52 aa11.21□□□□□ -0.61
SMARCC2-203ENST00000394023 SPAG11AQ6PDA7 123 aa11.21□□□□□ -0.62
SMARCC2-203ENST00000394023 A8MUN3 132 aa11.21□□□□□ -0.62
SMARCC2-203ENST00000394023 LIMD2Q9BT23 127 aa11.21□□□□□ -0.62
SMARCC2-203ENST00000394023 LINC00483Q53H64 154 aa11.2□□□□□ -0.62
SMARCC2-203ENST00000394023 COA5Q86WW8 74 aa11.19□□□□□ -0.62
SMARCC2-203ENST00000394023 FBN3Q75N90 2809 aa11.18□□□□□ -0.62
SMARCC2-203ENST00000394023 A0A087X002 238 aa11.17□□□□□ -0.62
SMARCC2-203ENST00000394023 NOTCH2NLQ7Z3S9 236 aa11.17□□□□□ -0.62
SMARCC2-203ENST00000394023 PRO0628Q9UI54 55 aa11.17□□□□□ -0.62
SMARCC2-203ENST00000394023 ZCCHC13Q8WW36 166 aaKnown RBP11.15□□□□□ -0.63
SMARCC2-203ENST00000394023 MEGF8Q7Z7M0 2845 aa11.13□□□□□ -0.63
SMARCC2-203ENST00000394023 Q96NJ1 140 aa11.11□□□□□ -0.63
SMARCC2-203ENST00000394023 LOC101927531A0A1B0GV80 90 aa11.11□□□□□ -0.63
SMARCC2-203ENST00000394023 C8orf87E5RJ46 101 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms