RNA–Protein interactions for RNA: ENST00000393357.6

PHTF1-205, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHTF1, Length 3,244 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-205ENST00000393357 IGFL1Q6UW32 110 aa10.45□□□□□ -0.74
PHTF1-205ENST00000393357 STAB2Q8WWQ8 2551 aa10.44□□□□□ -0.74
PHTF1-205ENST00000393357 KRTAP7-1Q8IUC3 87 aa10.43□□□□□ -0.74
PHTF1-205ENST00000393357 KMT2BQ9UMN6 2715 aaPredicted RBP10.43□□□□□ -0.74
PHTF1-205ENST00000393357 H0Y9P7 68 aa10.43□□□□□ -0.74
PHTF1-205ENST00000393357 B9D2Q9BPU9 175 aa10.43□□□□□ -0.74
PHTF1-205ENST00000393357 C11orf45Q8TAV5 145 aa10.42□□□□□ -0.74
PHTF1-205ENST00000393357 REG3GQ6UW15 175 aa10.4□□□□□ -0.74
PHTF1-205ENST00000393357 UBE2AP49459 152 aa10.39□□□□□ -0.75
PHTF1-205ENST00000393357 A6NED7 52 aa10.39□□□□□ -0.75
PHTF1-205ENST00000393357 CHTF8P0CG12 524 aa10.39□□□□□ -0.75
PHTF1-205ENST00000393357 CASC2Q6XLA1 102 aa10.39□□□□□ -0.75
PHTF1-205ENST00000393357 Q1T7F1 81 aa10.37□□□□□ -0.75
PHTF1-205ENST00000393357 NDUFS5O43920 106 aa10.37□□□□□ -0.75
PHTF1-205ENST00000393357 ZCCHC13Q8WW36 166 aaKnown RBP10.37□□□□□ -0.75
PHTF1-205ENST00000393357 ANK2Q01484 3957 aa10.37□□□□□ -0.75
PHTF1-205ENST00000393357 TNP2Q05952 138 aa10.37□□□□□ -0.75
PHTF1-205ENST00000393357 PRR15Q8IV56 129 aa10.35□□□□□ -0.75
PHTF1-205ENST00000393357 KRTAP10-11P60412 298 aa10.35□□□□□ -0.75
PHTF1-205ENST00000393357 LINC01556Q5JQF7 62 aa10.35□□□□□ -0.75
PHTF1-205ENST00000393357 Q5VV11 94 aa10.34□□□□□ -0.75
PHTF1-205ENST00000393357 KRTAP4-16G5E9R7 235 aaPredicted RBP10.34□□□□□ -0.75
PHTF1-205ENST00000393357 SPAG11AQ6PDA7 123 aa10.34□□□□□ -0.75
PHTF1-205ENST00000393357 SPRR4Q96PI1 79 aa10.33□□□□□ -0.76
PHTF1-205ENST00000393357 LINC00588Q9Y4M8 146 aa10.32□□□□□ -0.76
PHTF1-205ENST00000393357 PHF5AQ7RTV0 110 aaKnown RBP10.3□□□□□ -0.76
PHTF1-205ENST00000393357 IGLV9-49A0A0B4J1Y8 123 aa10.29□□□□□ -0.76
PHTF1-205ENST00000393357 NDUFB1O75438 58 aa10.29□□□□□ -0.76
PHTF1-205ENST00000393357 C16orf90A8MZG2 172 aa10.29□□□□□ -0.76
PHTF1-205ENST00000393357 Q8N9P0 234 aaPredicted RBP10.26□□□□□ -0.77
PHTF1-205ENST00000393357 LCE6AA0A183 80 aa10.26□□□□□ -0.77
PHTF1-205ENST00000393357 KRTAP11-1Q8IUC1 163 aa10.25□□□□□ -0.77
PHTF1-205ENST00000393357 CNBPP62633 177 aaKnown RBP10.25□□□□□ -0.77
PHTF1-205ENST00000393357 DNAH10Q8IVF4 4471 aa10.24□□□□□ -0.77
PHTF1-205ENST00000393357 SPRR1AP35321 89 aa10.24□□□□□ -0.77
PHTF1-205ENST00000393357 COA5Q86WW8 74 aa10.24□□□□□ -0.77
PHTF1-205ENST00000393357 LYSTQ99698 3801 aa10.24□□□□□ -0.77
PHTF1-205ENST00000393357 CYP4F30PQ9H0H9 118 aa10.23□□□□□ -0.77
PHTF1-205ENST00000393357 LCA10Q71F78 164 aa10.2□□□□□ -0.78
PHTF1-205ENST00000393357 DNAH10OSP0CZ25 163 aa10.19□□□□□ -0.78
PHTF1-205ENST00000393357 IGHV6-1A0A0B4J1U7 121 aa10.19□□□□□ -0.78
PHTF1-205ENST00000393357 ANAPC11Q9NYG5 84 aa10.18□□□□□ -0.78
PHTF1-205ENST00000393357 SPINK6Q6UWN8 80 aa10.17□□□□□ -0.78
PHTF1-205ENST00000393357 J3QKU1 62 aa10.16□□□□□ -0.78
PHTF1-205ENST00000393357 TLX1NBP0CAT3 122 aa10.15□□□□□ -0.78
PHTF1-205ENST00000393357 H3BNG1 76 aa10.15□□□□□ -0.78
PHTF1-205ENST00000393357 KRTAP29-1A8MX34 341 aaPredicted RBP10.14□□□□□ -0.79
PHTF1-205ENST00000393357 LIMD2Q9BT23 127 aa10.14□□□□□ -0.79
PHTF1-205ENST00000393357 A0A1B0GW54 56 aa10.14□□□□□ -0.79
PHTF1-205ENST00000393357 A8MWP4 228 aa10.13□□□□□ -0.79
PHTF1-205ENST00000393357 RETNLBQ9BQ08 111 aa10.13□□□□□ -0.79
PHTF1-205ENST00000393357 UBE2DNLQ8IWF7 75 aa10.13□□□□□ -0.79
PHTF1-205ENST00000393357 KRTAP1-5Q9BYS1 174 aa10.13□□□□□ -0.79
PHTF1-205ENST00000393357 RBM12B-AS1Q9P1G2 102 aa10.12□□□□□ -0.79
PHTF1-205ENST00000393357 K7EIL1 84 aa10.11□□□□□ -0.79
PHTF1-205ENST00000393357 PLA2G2DQ9UNK4 145 aa10.11□□□□□ -0.79
PHTF1-205ENST00000393357 CD164Q04900 197 aa10.11□□□□□ -0.79
PHTF1-205ENST00000393357 SPINK7P58062 85 aa10.09□□□□□ -0.79
PHTF1-205ENST00000393357 PRR26Q8N8Z3 221 aa10.09□□□□□ -0.79
PHTF1-205ENST00000393357 IGLV5-37A0A075B6J1 123 aa10.08□□□□□ -0.8
PHTF1-205ENST00000393357 KTN1-AS1Q86SY8 53 aa10.06□□□□□ -0.8
PHTF1-205ENST00000393357 LINC00472Q9H8W2 130 aa10.06□□□□□ -0.8
PHTF1-205ENST00000393357 MMP24-AS1A0A0U1RRL7 71 aa10.05□□□□□ -0.8
PHTF1-205ENST00000393357 PANO1I0J062 215 aa10.05□□□□□ -0.8
PHTF1-205ENST00000393357 A0A087X002 238 aa10.04□□□□□ -0.8
PHTF1-205ENST00000393357 CDK2AP2O75956 126 aa10.04□□□□□ -0.8
PHTF1-205ENST00000393357 NOTCH2NLQ7Z3S9 236 aa10.04□□□□□ -0.8
PHTF1-205ENST00000393357 C9orf163Q8N9P6 203 aa10.03□□□□□ -0.8
PHTF1-205ENST00000393357 LOC101927531A0A1B0GV80 90 aa10.03□□□□□ -0.8
PHTF1-205ENST00000393357 PRAC1Q96KF2 57 aa10.03□□□□□ -0.8
PHTF1-205ENST00000393357 SPANXA2-OT1Q8N9U9 137 aa10.01□□□□□ -0.81
PHTF1-205ENST00000393357 MOBPQ13875 183 aa9.99□□□□□ -0.81
PHTF1-205ENST00000393357 ATP11AUNQ6ZP68 121 aa9.98□□□□□ -0.81
PHTF1-205ENST00000393357 IGLV7-46A0A075B6I9 117 aa9.97□□□□□ -0.81
PHTF1-205ENST00000393357 HRES1P13985 223 aa9.97□□□□□ -0.81
PHTF1-205ENST00000393357 Q75L30 129 aa9.96□□□□□ -0.81
PHTF1-205ENST00000393357 KRTAP24-1Q3LI83 254 aa9.95□□□□□ -0.82
PHTF1-205ENST00000393357 TGP01266 2768 aa9.95□□□□□ -0.82
PHTF1-205ENST00000393357 C8orf17Q9NRJ1 99 aa9.95□□□□□ -0.82
PHTF1-205ENST00000393357 ADM2Q7Z4H4 148 aa9.94□□□□□ -0.82
PHTF1-205ENST00000393357 CDC42SE1Q9NRR8 79 aa9.92□□□□□ -0.82
PHTF1-205ENST00000393357 IGLV8-61A0A075B6I0 122 aa9.92□□□□□ -0.82
PHTF1-205ENST00000393357 H3BPC8 53 aa9.92□□□□□ -0.82
PHTF1-205ENST00000393357 A6NN06 94 aa9.9□□□□□ -0.82
PHTF1-205ENST00000393357 DNAH9Q9NYC9 4486 aa9.89□□□□□ -0.83
PHTF1-205ENST00000393357 CIRBP-AS1Q8TBR5 109 aa9.88□□□□□ -0.83
PHTF1-205ENST00000393357 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.88□□□□□ -0.83
PHTF1-205ENST00000393357 Q5W150 140 aa9.86□□□□□ -0.83
PHTF1-205ENST00000393357 FBN3Q75N90 2809 aa9.85□□□□□ -0.83
PHTF1-205ENST00000393357 Q96NJ1 140 aa9.84□□□□□ -0.83
PHTF1-205ENST00000393357 MRPL34Q9BQ48 92 aaKnown RBP9.84□□□□□ -0.83
PHTF1-205ENST00000393357 C7orf65Q6ZTY9 151 aa9.84□□□□□ -0.83
PHTF1-205ENST00000393357 A0A1B0GVX0 72 aa9.83□□□□□ -0.84
PHTF1-205ENST00000393357 LINC01558Q9Y6Z2 57 aa9.83□□□□□ -0.84
PHTF1-205ENST00000393357 LINC00313P59037 77 aa9.81□□□□□ -0.84
PHTF1-205ENST00000393357 TP53AIP1Q9HCN2 124 aa9.8□□□□□ -0.84
PHTF1-205ENST00000393357 MDFIQ99750 246 aa9.79□□□□□ -0.84
PHTF1-205ENST00000393357 FRAS1Q86XX4 4008 aa9.78□□□□□ -0.84
PHTF1-205ENST00000393357 FLG2Q5D862 2391 aaPredicted RBP9.78□□□□□ -0.84
PHTF1-205ENST00000393357 DNAH7Q8WXX0 4024 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms