RNA–Protein interactions for RNA: ENST00000389759.7

PKP4-202, Transcript of plakophilin 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PKP4, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-202ENST00000389759 UQCR11O14957 56 aa5.64□□□□□ -1.51
PKP4-202ENST00000389759 C8orf17Q9NRJ1 99 aa5.64□□□□□ -1.51
PKP4-202ENST00000389759 SPENQ96T58 3664 aaKnown RBP5.64□□□□□ -1.51
PKP4-202ENST00000389759 DCHS2Q6V1P9 2916 aa5.64□□□□□ -1.51
PKP4-202ENST00000389759 TLX1NBP0CAT3 122 aa5.64□□□□□ -1.51
PKP4-202ENST00000389759 MDFIQ99750 246 aa5.64□□□□□ -1.51
PKP4-202ENST00000389759 PLA2G2DQ9UNK4 145 aa5.64□□□□□ -1.51
PKP4-202ENST00000389759 TEP1Q99973 2627 aaKnown RBP5.63□□□□□ -1.51
PKP4-202ENST00000389759 Q1T7F1 81 aa5.63□□□□□ -1.51
PKP4-202ENST00000389759 CELSR1Q9NYQ6 3014 aa5.62□□□□□ -1.51
PKP4-202ENST00000389759 CR1P17927 2039 aa5.62□□□□□ -1.51
PKP4-202ENST00000389759 FP248Q71RG6 208 aaPredicted RBP5.62□□□□□ -1.51
PKP4-202ENST00000389759 A0A1B0GVX0 72 aa5.6□□□□□ -1.51
PKP4-202ENST00000389759 NBDYA0A0U1RRE5 68 aa5.6□□□□□ -1.51
PKP4-202ENST00000389759 LCA10Q71F78 164 aa5.6□□□□□ -1.51
PKP4-202ENST00000389759 DSCR10P59022 87 aa5.59□□□□□ -1.52
PKP4-202ENST00000389759 HELZ2Q9BYK8 2649 aaKnown RBP5.58□□□□□ -1.52
PKP4-202ENST00000389759 CDC42SE1Q9NRR8 79 aa5.58□□□□□ -1.52
PKP4-202ENST00000389759 MIR22HGQ0VDD5 57 aa5.58□□□□□ -1.52
PKP4-202ENST00000389759 GCN1Q92616 2671 aaKnown RBP5.58□□□□□ -1.52
PKP4-202ENST00000389759 UNC79Q9P2D8 2635 aa5.58□□□□□ -1.52
PKP4-202ENST00000389759 NF1P21359 2839 aa5.58□□□□□ -1.52
PKP4-202ENST00000389759 SPRR4Q96PI1 79 aa5.58□□□□□ -1.52
PKP4-202ENST00000389759 RTL8CO15255 209 aa5.57□□□□□ -1.52
PKP4-202ENST00000389759 OXTP01178 125 aa5.57□□□□□ -1.52
PKP4-202ENST00000389759 NBEAL2Q6ZNJ1 2754 aa5.56□□□□□ -1.52
PKP4-202ENST00000389759 FAM229BQ4G0N7 80 aa5.56□□□□□ -1.52
PKP4-202ENST00000389759 NBEAL1Q6ZS30 2694 aa5.56□□□□□ -1.52
PKP4-202ENST00000389759 Q8NDZ9 215 aa5.56□□□□□ -1.52
PKP4-202ENST00000389759 KRTAP24-1Q3LI83 254 aa5.55□□□□□ -1.52
PKP4-202ENST00000389759 TEX15Q9BXT5 2789 aa5.55□□□□□ -1.52
PKP4-202ENST00000389759 NOTCH1P46531 2555 aa5.55□□□□□ -1.52
PKP4-202ENST00000389759 IGSF10Q6WRI0 2623 aa5.55□□□□□ -1.52
PKP4-202ENST00000389759 IGLV5-37A0A075B6J1 123 aa5.54□□□□□ -1.52
PKP4-202ENST00000389759 FBN2P35556 2912 aa5.54□□□□□ -1.52
PKP4-202ENST00000389759 CASC10Q5T4H9 136 aa5.54□□□□□ -1.52
PKP4-202ENST00000389759 C9orf163Q8N9P6 203 aa5.54□□□□□ -1.52
PKP4-202ENST00000389759 KRTAP10-3P60369 221 aa5.53□□□□□ -1.52
PKP4-202ENST00000389759 Q96NJ1 140 aa5.53□□□□□ -1.52
PKP4-202ENST00000389759 UBR5O95071 2799 aaPredicted RBP5.52□□□□□ -1.53
PKP4-202ENST00000389759 PRR26Q8N8Z3 221 aa5.52□□□□□ -1.53
PKP4-202ENST00000389759 ZNF861PO60384 105 aa5.52□□□□□ -1.53
PKP4-202ENST00000389759 TYMSOSQ8TAI1 123 aa5.52□□□□□ -1.53
PKP4-202ENST00000389759 SSBP3-AS1Q7Z2R9 100 aa5.51□□□□□ -1.53
PKP4-202ENST00000389759 Q8N9P0 234 aaPredicted RBP5.51□□□□□ -1.53
PKP4-202ENST00000389759 IGLV7-46A0A075B6I9 117 aa5.51□□□□□ -1.53
PKP4-202ENST00000389759 KRTAP10-11P60412 298 aa5.5□□□□□ -1.53
PKP4-202ENST00000389759 SPINT4Q6UDR6 99 aa5.5□□□□□ -1.53
PKP4-202ENST00000389759 CELSR2Q9HCU4 2923 aa5.49□□□□□ -1.53
PKP4-202ENST00000389759 Q75L30 129 aa5.49□□□□□ -1.53
PKP4-202ENST00000389759 CNBPP62633 177 aaKnown RBP5.49□□□□□ -1.53
PKP4-202ENST00000389759 RBM12B-AS1Q9P1G2 102 aa5.49□□□□□ -1.53
PKP4-202ENST00000389759 ANAPC11Q9NYG5 84 aa5.49□□□□□ -1.53
PKP4-202ENST00000389759 BAHCC1Q9P281 2608 aa5.48□□□□□ -1.53
PKP4-202ENST00000389759 ITPR2Q14571 2701 aa5.48□□□□□ -1.53
PKP4-202ENST00000389759 STAB1Q9NY15 2570 aa5.46□□□□□ -1.53
PKP4-202ENST00000389759 KRTAP1-3Q8IUG1 177 aa5.46□□□□□ -1.53
PKP4-202ENST00000389759 CSMD2Q7Z408 3487 aa5.46□□□□□ -1.54
PKP4-202ENST00000389759 HRNRQ86YZ3 2850 aaPredicted RBP5.46□□□□□ -1.54
PKP4-202ENST00000389759 COL6A5A8TX70 2615 aa5.45□□□□□ -1.54
PKP4-202ENST00000389759 SPRR1AP35321 89 aa5.45□□□□□ -1.54
PKP4-202ENST00000389759 Q5VV11 94 aa5.45□□□□□ -1.54
PKP4-202ENST00000389759 PLA2G1BP04054 148 aaKnown RBP5.45□□□□□ -1.54
PKP4-202ENST00000389759 PSORS1C2Q9UIG4 136 aa5.45□□□□□ -1.54
PKP4-202ENST00000389759 K7EIL1 84 aa5.45□□□□□ -1.54
PKP4-202ENST00000389759 LINC01558Q9Y6Z2 57 aa5.45□□□□□ -1.54
PKP4-202ENST00000389759 KRTAP1-1Q07627 177 aa5.43□□□□□ -1.54
PKP4-202ENST00000389759 A0A087WTM6 91 aa5.43□□□□□ -1.54
PKP4-202ENST00000389759 MMP24-AS1A0A0U1RRL7 71 aa5.42□□□□□ -1.54
PKP4-202ENST00000389759 IGLV7-43P04211 117 aa5.41□□□□□ -1.54
PKP4-202ENST00000389759 NIPBLQ6KC79 2804 aaeCLIP5.39□□□□□ -1.555e-6■□□□□ 8.1
PKP4-202ENST00000389759 HRES1P13985 223 aa5.39□□□□□ -1.55
PKP4-202ENST00000389759 CRIPTQ9P021 101 aa5.39□□□□□ -1.55
PKP4-202ENST00000389759 SETXQ7Z333 2677 aaKnown RBP5.38□□□□□ -1.55
PKP4-202ENST00000389759 LINC01554Q52M75 96 aa5.38□□□□□ -1.55
PKP4-202ENST00000389759 Q8N1X5 172 aa5.38□□□□□ -1.55
PKP4-202ENST00000389759 LINC00472Q9H8W2 130 aa5.38□□□□□ -1.55
PKP4-202ENST00000389759 MXRA5Q9NR99 2828 aa5.37□□□□□ -1.55
PKP4-202ENST00000389759 PRAC1Q96KF2 57 aa5.37□□□□□ -1.55
PKP4-202ENST00000389759 LINC00304Q8N9R0 145 aa5.36□□□□□ -1.55
PKP4-202ENST00000389759 TNP2Q05952 138 aa5.36□□□□□ -1.55
PKP4-202ENST00000389759 APLNQ9ULZ1 77 aa5.36□□□□□ -1.55
PKP4-202ENST00000389759 SPINK7P58062 85 aa5.36□□□□□ -1.55
PKP4-202ENST00000389759 SPRR1BP22528 89 aa5.35□□□□□ -1.55
PKP4-202ENST00000389759 KRTAP26-1Q6PEX3 210 aa5.34□□□□□ -1.56
PKP4-202ENST00000389759 HIVEP1P15822 2718 aa5.33□□□□□ -1.56
PKP4-202ENST00000389759 C9orf92A6NGG3 77 aa5.33□□□□□ -1.56
PKP4-202ENST00000389759 ZCCHC13Q8WW36 166 aaKnown RBP5.32□□□□□ -1.56
PKP4-202ENST00000389759 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.32□□□□□ -1.56
PKP4-202ENST00000389759 FLG2Q5D862 2391 aaPredicted RBP5.31□□□□□ -1.56
PKP4-202ENST00000389759 NSD1Q96L73 2696 aaPredicted RBP5.3□□□□□ -1.56
PKP4-202ENST00000389759 A0A1B0GU33 70 aa5.3□□□□□ -1.56
PKP4-202ENST00000389759 STAB2Q8WWQ8 2551 aa5.29□□□□□ -1.56
PKP4-202ENST00000389759 A0A0D9SG42 100 aa5.29□□□□□ -1.56
PKP4-202ENST00000389759 KRTAP4-16G5E9R7 235 aaPredicted RBP5.28□□□□□ -1.56
PKP4-202ENST00000389759 KRTAP29-1A8MX34 341 aaPredicted RBP5.28□□□□□ -1.56
PKP4-202ENST00000389759 DMBT1Q9UGM3 2413 aaPredicted RBP5.28□□□□□ -1.56
PKP4-202ENST00000389759 H3BS24 57 aa5.28□□□□□ -1.56
PKP4-202ENST00000389759 APCP25054 2843 aa5.27□□□□□ -1.57
PKP4-202ENST00000389759 WWC2-AS2Q96NR7 200 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms