RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 Q9BRP9 147 aa8.82□□□□□ -1
VCX3A-201ENST00000381089 COX7BP24311 80 aa8.8□□□□□ -1
VCX3A-201ENST00000381089 Q1RN00 199 aa8.8□□□□□ -1
VCX3A-201ENST00000381089 LCE2CQ5TA81 110 aa8.79□□□□□ -1
VCX3A-201ENST00000381089 LIMD2Q9BT23 127 aa8.79□□□□□ -1
VCX3A-201ENST00000381089 M0R143 59 aa8.78□□□□□ -1
VCX3A-201ENST00000381089 PRO1854Q9UHT4 67 aa8.78□□□□□ -1
VCX3A-201ENST00000381089 BATFQ16520 125 aa8.77□□□□□ -1.01
VCX3A-201ENST00000381089 IGLV8-61A0A075B6I0 122 aa8.76□□□□□ -1.01
VCX3A-201ENST00000381089 ELOF1P60002 83 aaKnown RBP8.76□□□□□ -1.01
VCX3A-201ENST00000381089 A0A1B0GWB2 263 aa8.75□□□□□ -1.01
VCX3A-201ENST00000381089 MT1HP80294 61 aa8.75□□□□□ -1.01
VCX3A-201ENST00000381089 PCOTHQ58A44 107 aa8.75□□□□□ -1.01
VCX3A-201ENST00000381089 TRBV7-6A0A0J9YX20 115 aa8.74□□□□□ -1.01
VCX3A-201ENST00000381089 VAMP3Q15836 100 aa8.73□□□□□ -1.01
VCX3A-201ENST00000381089 KRTAP19-2Q3LHN2 52 aa8.72□□□□□ -1.01
VCX3A-201ENST00000381089 DHRS4-AS1Q9P1J3 65 aa8.72□□□□□ -1.01
VCX3A-201ENST00000381089 C9orf92A6NGG3 77 aa8.71□□□□□ -1.02
VCX3A-201ENST00000381089 PCP4L1A6NKN8 68 aa8.71□□□□□ -1.02
VCX3A-201ENST00000381089 ST20-AS1Q8NBB2 130 aa8.71□□□□□ -1.02
VCX3A-201ENST00000381089 PSMB2P49721 201 aa8.7□□□□□ -1.02
VCX3A-201ENST00000381089 HRCT1Q6UXD1 115 aa8.7□□□□□ -1.02
VCX3A-201ENST00000381089 TRIAP1O43715 76 aa8.69□□□□□ -1.02
VCX3A-201ENST00000381089 LINC00575Q6W349 94 aa8.68□□□□□ -1.02
VCX3A-201ENST00000381089 LAMTOR3Q9UHA4 124 aa8.68□□□□□ -1.02
VCX3A-201ENST00000381089 M0R2T5 61 aa8.66□□□□□ -1.02
VCX3A-201ENST00000381089 SPRR1BP22528 89 aa8.66□□□□□ -1.02
VCX3A-201ENST00000381089 NAA38Q9BRA0 125 aaKnown RBP8.66□□□□□ -1.02
VCX3A-201ENST00000381089 DEFB105AQ8NG35 78 aa8.65□□□□□ -1.02
VCX3A-201ENST00000381089 FAM218AQ96MZ4 157 aa8.65□□□□□ -1.02
VCX3A-201ENST00000381089 hADV29S1A0JD25 119 aa8.64□□□□□ -1.03
VCX3A-201ENST00000381089 H0YGX0 51 aa8.64□□□□□ -1.03
VCX3A-201ENST00000381089 LORP23490 312 aaPredicted RBP8.64□□□□□ -1.03
VCX3A-201ENST00000381089 KRTAP10-6P60371 365 aaPredicted RBP8.64□□□□□ -1.03
VCX3A-201ENST00000381089 CLEC2BQ92478 149 aa8.64□□□□□ -1.03
VCX3A-201ENST00000381089 CD164Q04900 197 aa8.63□□□□□ -1.03
VCX3A-201ENST00000381089 SNHG12Q9BXW3 62 aa8.63□□□□□ -1.03
VCX3A-201ENST00000381089 COX6CP09669 75 aa8.62□□□□□ -1.03
VCX3A-201ENST00000381089 SCGB1C2P0DMR2 95 aa8.62□□□□□ -1.03
VCX3A-201ENST00000381089 COX6B2Q6YFQ2 88 aa8.62□□□□□ -1.03
VCX3A-201ENST00000381089 Q6ZQY7 126 aa8.62□□□□□ -1.03
VCX3A-201ENST00000381089 TEX49A0A1B0GTD5 131 aa8.58□□□□□ -1.04
VCX3A-201ENST00000381089 SNCGO76070 127 aa8.58□□□□□ -1.04
VCX3A-201ENST00000381089 IGLV5-48A0A075B6I7 105 aa8.57□□□□□ -1.04
VCX3A-201ENST00000381089 H3BUT2 72 aa8.57□□□□□ -1.04
VCX3A-201ENST00000381089 TAX1BP3O14907 124 aa8.57□□□□□ -1.04
VCX3A-201ENST00000381089 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.57□□□□□ -1.04
VCX3A-201ENST00000381089 Q5XG85 94 aa8.56□□□□□ -1.04
VCX3A-201ENST00000381089 RPL37P61927 97 aaKnown RBP8.55□□□□□ -1.04
VCX3A-201ENST00000381089 A0A1B0GX51 115 aa8.54□□□□□ -1.04
VCX3A-201ENST00000381089 C9orf118A6NHY6 69 aa8.54□□□□□ -1.04
VCX3A-201ENST00000381089 DNAL4O96015 105 aa8.54□□□□□ -1.04
VCX3A-201ENST00000381089 COL5A1-AS1Q5SY13 56 aa8.54□□□□□ -1.04
VCX3A-201ENST00000381089 LST1O00453 97 aa8.53□□□□□ -1.04
VCX3A-201ENST00000381089 TCL1BO95988 128 aa8.52□□□□□ -1.05
VCX3A-201ENST00000381089 C1orf195Q5TG92 126 aa8.52□□□□□ -1.05
VCX3A-201ENST00000381089 SMIM29Q86T20 159 aa8.52□□□□□ -1.05
VCX3A-201ENST00000381089 LYRM7Q5U5X0 104 aa8.51□□□□□ -1.05
VCX3A-201ENST00000381089 TRACP01848 142 aa8.5□□□□□ -1.05
VCX3A-201ENST00000381089 FLGP20930 4061 aaPredicted RBP8.49□□□□□ -1.05
VCX3A-201ENST00000381089 A0A1W2PPM0 123 aa8.49□□□□□ -1.05
VCX3A-201ENST00000381089 F8WEM9 126 aa8.49□□□□□ -1.05
VCX3A-201ENST00000381089 FABP2P12104 132 aa8.49□□□□□ -1.05
VCX3A-201ENST00000381089 ATXN8Q156A1 80 aa8.49□□□□□ -1.05
VCX3A-201ENST00000381089 OCIAD2Q56VL3 154 aa8.49□□□□□ -1.05
VCX3A-201ENST00000381089 ORMDL1Q9P0S3 153 aa8.49□□□□□ -1.05
VCX3A-201ENST00000381089 PPDPFLQ8WWR9 84 aa8.47□□□□□ -1.05
VCX3A-201ENST00000381089 A0A0G2JQZ4 141 aa8.45□□□□□ -1.06
VCX3A-201ENST00000381089 A0A1B0GV72 72 aa8.45□□□□□ -1.06
VCX3A-201ENST00000381089 TRBV20-1A0A075B6N2 111 aa8.44□□□□□ -1.06
VCX3A-201ENST00000381089 GHRHP01286 108 aa8.44□□□□□ -1.06
VCX3A-201ENST00000381089 NDUFV3P56181 108 aaKnown RBP8.44□□□□□ -1.06
VCX3A-201ENST00000381089 SPCS1Q9Y6A9 102 aa8.43□□□□□ -1.06
VCX3A-201ENST00000381089 C9JAW5 83 aa8.41□□□□□ -1.06
VCX3A-201ENST00000381089 BAALC-AS2P0C853 105 aa8.41□□□□□ -1.06
VCX3A-201ENST00000381089 Q6Q795 121 aa8.41□□□□□ -1.06
VCX3A-201ENST00000381089 H3BQ85 93 aa8.4□□□□□ -1.06
VCX3A-201ENST00000381089 TMEM256-PLSCR3K7ERE1 68 aa8.4□□□□□ -1.06
VCX3A-201ENST00000381089 MTURNQ8N3F0 131 aa8.4□□□□□ -1.06
VCX3A-201ENST00000381089 H3BMG7 143 aa8.39□□□□□ -1.07
VCX3A-201ENST00000381089 ATP11AUNQ6ZP68 121 aa8.39□□□□□ -1.07
VCX3A-201ENST00000381089 IGFL1Q6UW32 110 aa8.38□□□□□ -1.07
VCX3A-201ENST00000381089 Q6JHZ5 121 aa8.37□□□□□ -1.07
VCX3A-201ENST00000381089 ANKRD29Q8N6D5 301 aa8.37□□□□□ -1.07
VCX3A-201ENST00000381089 K7EP34 96 aa8.36□□□□□ -1.07
VCX3A-201ENST00000381089 UBE2V1Q13404 147 aa8.36□□□□□ -1.07
VCX3A-201ENST00000381089 KRTAP9-7A8MTY7 169 aa8.33□□□□□ -1.08
VCX3A-201ENST00000381089 Q75L30 129 aa8.33□□□□□ -1.08
VCX3A-201ENST00000381089 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.32□□□□□ -1.08
VCX3A-201ENST00000381089 OBSCN-AS1Q96MR7 158 aa8.31□□□□□ -1.08
VCX3A-201ENST00000381089 H3BT86 120 aa8.3□□□□□ -1.08
VCX3A-201ENST00000381089 GTF2H5Q6ZYL4 71 aa8.3□□□□□ -1.08
VCX3A-201ENST00000381089 RBM3P98179 157 aaKnown RBP8.29□□□□□ -1.08
VCX3A-201ENST00000381089 TRBV7-7A0A0K0K1E9 115 aa8.28□□□□□ -1.08
VCX3A-201ENST00000381089 DSCR8Q96T75 97 aa8.27□□□□□ -1.09
VCX3A-201ENST00000381089 VPS25Q9BRG1 176 aa8.27□□□□□ -1.09
VCX3A-201ENST00000381089 A0A1W2PNM2 257 aa8.26□□□□□ -1.09
VCX3A-201ENST00000381089 SMCPP49901 116 aaPredicted RBP8.26□□□□□ -1.09
VCX3A-201ENST00000381089 PRO0461Q9UI25 63 aa8.26□□□□□ -1.09
VCX3A-201ENST00000381089 TRBV7-4A0A0J9YYF1 115 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms