RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 TMEM254Q8TBM7 123 aa12.51□□□□□ -0.41
EBF1-202ENST00000380654 K7EQZ3 153 aa12.5□□□□□ -0.41
EBF1-202ENST00000380654 PRKDCP78527 4128 aaKnown RBP12.5□□□□□ -0.41
EBF1-202ENST00000380654 NBDYA0A0U1RRE5 68 aa12.5□□□□□ -0.41
EBF1-202ENST00000380654 EPM2AB3EWF7 344 aa12.5□□□□□ -0.41
EBF1-202ENST00000380654 C9orf163Q8N9P6 203 aa12.5□□□□□ -0.41
EBF1-202ENST00000380654 SVIPQ8NHG7 77 aa12.5□□□□□ -0.41
EBF1-202ENST00000380654 PANO1I0J062 215 aa12.49□□□□□ -0.41
EBF1-202ENST00000380654 DEFB116Q30KQ4 102 aa12.49□□□□□ -0.41
EBF1-202ENST00000380654 FAM30AQ9NZY2 134 aa12.47□□□□□ -0.41
EBF1-202ENST00000380654 VPS13DQ5THJ4 4388 aa12.47□□□□□ -0.41
EBF1-202ENST00000380654 UBE2AP49459 152 aa12.46□□□□□ -0.41
EBF1-202ENST00000380654 Q6ZRN7 208 aaPredicted RBP12.46□□□□□ -0.41
EBF1-202ENST00000380654 IGLV8-61A0A075B6I0 122 aa12.44□□□□□ -0.42
EBF1-202ENST00000380654 A0A087WSZ3 146 aa12.44□□□□□ -0.42
EBF1-202ENST00000380654 A0A0U1RQV1 116 aa12.42□□□□□ -0.42
EBF1-202ENST00000380654 NUPR2A6NF83 97 aa12.42□□□□□ -0.42
EBF1-202ENST00000380654 NDUFC1O43677 76 aa12.41□□□□□ -0.42
EBF1-202ENST00000380654 KMT2AQ03164 3969 aa12.4□□□□□ -0.42
EBF1-202ENST00000380654 HECTD4Q9Y4D8 3996 aa12.4□□□□□ -0.42
EBF1-202ENST00000380654 H0Y9J4 135 aa12.39□□□□□ -0.43
EBF1-202ENST00000380654 SERP1Q9Y6X1 66 aa12.38□□□□□ -0.43
EBF1-202ENST00000380654 DNAH2Q9P225 4427 aa12.37□□□□□ -0.43
EBF1-202ENST00000380654 Q5XG85 94 aa12.36□□□□□ -0.43
EBF1-202ENST00000380654 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.36□□□□□ -0.43
EBF1-202ENST00000380654 SPRR1BP22528 89 aa12.36□□□□□ -0.43
EBF1-202ENST00000380654 RPL37AP61513 92 aaKnown RBP12.36□□□□□ -0.43
EBF1-202ENST00000380654 LINC00474Q9P2X8 69 aa12.34□□□□□ -0.43
EBF1-202ENST00000380654 HCG22E2RYF7 251 aa12.34□□□□□ -0.43
EBF1-202ENST00000380654 C4orf26Q17RF5 130 aa12.33□□□□□ -0.44
EBF1-202ENST00000380654 FRAS1Q86XX4 4008 aa12.32□□□□□ -0.44
EBF1-202ENST00000380654 KRTAP13-1Q8IUC0 172 aa12.32□□□□□ -0.44
EBF1-202ENST00000380654 MEGF8Q7Z7M0 2845 aa12.31□□□□□ -0.44
EBF1-202ENST00000380654 WFDC13Q8IUB5 93 aa12.3□□□□□ -0.44
EBF1-202ENST00000380654 SPACA4Q8TDM5 124 aa12.3□□□□□ -0.44
EBF1-202ENST00000380654 LCE6AA0A183 80 aa12.29□□□□□ -0.44
EBF1-202ENST00000380654 PKIGQ9Y2B9 76 aa12.29□□□□□ -0.44
EBF1-202ENST00000380654 A0A087WTM6 91 aa12.27□□□□□ -0.44
EBF1-202ENST00000380654 ATP5EP56381 51 aaPredicted RBP12.25□□□□□ -0.45
EBF1-202ENST00000380654 DNAH17Q9UFH2 4485 aa12.25□□□□□ -0.45
EBF1-202ENST00000380654 DNAH8Q96JB1 4490 aa12.25□□□□□ -0.45
EBF1-202ENST00000380654 FBN3Q75N90 2809 aa12.24□□□□□ -0.45
EBF1-202ENST00000380654 HRCT1Q6UXD1 115 aa12.23□□□□□ -0.45
EBF1-202ENST00000380654 LINC00472Q9H8W2 130 aa12.22□□□□□ -0.45
EBF1-202ENST00000380654 DNHD1Q96M86 4753 aa12.22□□□□□ -0.45
EBF1-202ENST00000380654 TGP01266 2768 aa12.22□□□□□ -0.45
EBF1-202ENST00000380654 IGLV9-49A0A0B4J1Y8 123 aa12.21□□□□□ -0.46
EBF1-202ENST00000380654 ZCCHC13Q8WW36 166 aaKnown RBP12.21□□□□□ -0.46
EBF1-202ENST00000380654 FP248Q71RG6 208 aaPredicted RBP12.2□□□□□ -0.46
EBF1-202ENST00000380654 RTL8CO15255 209 aa12.2□□□□□ -0.46
EBF1-202ENST00000380654 KRTAP29-1A8MX34 341 aaPredicted RBP12.18□□□□□ -0.46
EBF1-202ENST00000380654 C5orf47Q569G3 176 aa12.18□□□□□ -0.46
EBF1-202ENST00000380654 PRR15Q8IV56 129 aa12.18□□□□□ -0.46
EBF1-202ENST00000380654 FAM229BQ4G0N7 80 aa12.17□□□□□ -0.46
EBF1-202ENST00000380654 A8MWP4 228 aa12.16□□□□□ -0.46
EBF1-202ENST00000380654 SMIM26A0A096LP01 95 aa12.15□□□□□ -0.46
EBF1-202ENST00000380654 Q6ZR54 194 aa12.15□□□□□ -0.46
EBF1-202ENST00000380654 PSORS1C2Q9UIG4 136 aa12.15□□□□□ -0.46
EBF1-202ENST00000380654 CASC2Q6XLA1 102 aa12.14□□□□□ -0.47
EBF1-202ENST00000380654 ANAPC11Q9NYG5 84 aa12.12□□□□□ -0.47
EBF1-202ENST00000380654 IGLV5-52A0A0A0MRZ9 124 aa12.11□□□□□ -0.47
EBF1-202ENST00000380654 DNAH6Q9C0G6 4158 aa12.11□□□□□ -0.47
EBF1-202ENST00000380654 LINC00483Q53H64 154 aa12.1□□□□□ -0.47
EBF1-202ENST00000380654 Q96NJ1 140 aa12.08□□□□□ -0.48
EBF1-202ENST00000380654 PLAC8Q9NZF1 115 aa12.08□□□□□ -0.48
EBF1-202ENST00000380654 PRR4Q16378 134 aa12.07□□□□□ -0.48
EBF1-202ENST00000380654 WWC2-AS2Q96NR7 200 aa12.07□□□□□ -0.48
EBF1-202ENST00000380654 MOBPQ13875 183 aa12.06□□□□□ -0.48
EBF1-202ENST00000380654 LINC00208Q96KT6 92 aa12.06□□□□□ -0.48
EBF1-202ENST00000380654 MMP24-AS1A0A0U1RRL7 71 aa12.05□□□□□ -0.48
EBF1-202ENST00000380654 MP68P56378 58 aa12.05□□□□□ -0.48
EBF1-202ENST00000380654 H0Y9P7 68 aa12.03□□□□□ -0.48
EBF1-202ENST00000380654 ZNF861PO60384 105 aa12.03□□□□□ -0.48
EBF1-202ENST00000380654 C1orf134Q5TEV5 83 aa12.03□□□□□ -0.48
EBF1-202ENST00000380654 MPLKIPQ8TAP9 179 aa12.03□□□□□ -0.48
EBF1-202ENST00000380654 C1orf64Q8NEQ6 169 aa12.02□□□□□ -0.49
EBF1-202ENST00000380654 ALMS1Q8TCU4 4167 aa12.02□□□□□ -0.49
EBF1-202ENST00000380654 DNAH11Q96DT5 4516 aa12.02□□□□□ -0.49
EBF1-202ENST00000380654 ZNF706Q9Y5V0 76 aaPredicted RBP12.02□□□□□ -0.49
EBF1-202ENST00000380654 DNAH5Q8TE73 4624 aa12.01□□□□□ -0.49
EBF1-202ENST00000380654 TRAV22A0A0B4J277 110 aa12.01□□□□□ -0.49
EBF1-202ENST00000380654 hDV103S1A0JD37 113 aa12.01□□□□□ -0.49
EBF1-202ENST00000380654 NDUFB1O75438 58 aa11.99□□□□□ -0.49
EBF1-202ENST00000380654 LY6G6CO95867 125 aa11.99□□□□□ -0.49
EBF1-202ENST00000380654 LINC00336Q6ZUF6 198 aa11.94□□□□□ -0.5
EBF1-202ENST00000380654 CYP4F30PQ9H0H9 118 aa11.93□□□□□ -0.5
EBF1-202ENST00000380654 IGHV6-1A0A0B4J1U7 121 aa11.92□□□□□ -0.5
EBF1-202ENST00000380654 IGLV7-43P04211 117 aa11.91□□□□□ -0.5
EBF1-202ENST00000380654 C8orf17Q9NRJ1 99 aa11.91□□□□□ -0.5
EBF1-202ENST00000380654 ASB16-AS1Q495Z4 193 aa11.89□□□□□ -0.51
EBF1-202ENST00000380654 KRTAP10-2P60368 255 aa11.89□□□□□ -0.51
EBF1-202ENST00000380654 H3BPC8 53 aa11.88□□□□□ -0.51
EBF1-202ENST00000380654 A0A1B0GVX0 72 aa11.87□□□□□ -0.51
EBF1-202ENST00000380654 HYDINQ4G0P3 5121 aa11.87□□□□□ -0.51
EBF1-202ENST00000380654 A0A087X002 238 aa11.87□□□□□ -0.51
EBF1-202ENST00000380654 NOTCH2NLQ7Z3S9 236 aa11.87□□□□□ -0.51
EBF1-202ENST00000380654 PKD1P98161 4303 aa11.85□□□□□ -0.51
EBF1-202ENST00000380654 CIRBP-AS1Q8TBR5 109 aa11.85□□□□□ -0.51
EBF1-202ENST00000380654 CDK2AP2O75956 126 aa11.82□□□□□ -0.52
EBF1-202ENST00000380654 LRP1BQ9NZR2 4599 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms