RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 Q6JHZ5 121 aa13.45□□□□□ -0.26
TNFRSF4-201ENST00000379236 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.45□□□□□ -0.26
TNFRSF4-201ENST00000379236 RAB37Q96AX2 223 aa13.45□□□□□ -0.26
TNFRSF4-201ENST00000379236 C14orf144Q96I85 54 aa13.44□□□□□ -0.26
TNFRSF4-201ENST00000379236 PAM16Q9Y3D7 125 aa13.44□□□□□ -0.26
TNFRSF4-201ENST00000379236 SPATA45Q537H7 98 aa13.43□□□□□ -0.26
TNFRSF4-201ENST00000379236 PCOTHQ58A44 107 aa13.42□□□□□ -0.26
TNFRSF4-201ENST00000379236 PPDPFLQ8WWR9 84 aa13.41□□□□□ -0.26
TNFRSF4-201ENST00000379236 CLEC2BQ92478 149 aa13.41□□□□□ -0.26
TNFRSF4-201ENST00000379236 VAMP8Q9BV40 100 aa13.41□□□□□ -0.26
TNFRSF4-201ENST00000379236 SNCGO76070 127 aa13.4□□□□□ -0.26
TNFRSF4-201ENST00000379236 SNHG12Q9BXW3 62 aa13.4□□□□□ -0.26
TNFRSF4-201ENST00000379236 OCIAD2Q56VL3 154 aa13.39□□□□□ -0.27
TNFRSF4-201ENST00000379236 IGLV8-61A0A075B6I0 122 aa13.38□□□□□ -0.27
TNFRSF4-201ENST00000379236 HIGD1BQ9P298 99 aa13.38□□□□□ -0.27
TNFRSF4-201ENST00000379236 CFC1BP0CG36 223 aa13.37□□□□□ -0.27
TNFRSF4-201ENST00000379236 CFC1P0CG37 223 aa13.37□□□□□ -0.27
TNFRSF4-201ENST00000379236 IGFL1Q6UW32 110 aa13.37□□□□□ -0.27
TNFRSF4-201ENST00000379236 KRTAP9-2Q9BYQ4 174 aa13.36□□□□□ -0.27
TNFRSF4-201ENST00000379236 TRBV7-7A0A0K0K1E9 115 aa13.34□□□□□ -0.27
TNFRSF4-201ENST00000379236 A0A0B4J2C4 111 aa13.33□□□□□ -0.28
TNFRSF4-201ENST00000379236 H0YGX0 51 aa13.32□□□□□ -0.28
TNFRSF4-201ENST00000379236 TMEM238LA0A1B0GVL6 79 aa13.29□□□□□ -0.28
TNFRSF4-201ENST00000379236 A6NJY4 79 aa13.29□□□□□ -0.28
TNFRSF4-201ENST00000379236 C2orf91Q6ZV80 131 aa13.29□□□□□ -0.28
TNFRSF4-201ENST00000379236 H3BUT2 72 aa13.27□□□□□ -0.29
TNFRSF4-201ENST00000379236 RPL37P61927 97 aaKnown RBP13.27□□□□□ -0.29
TNFRSF4-201ENST00000379236 CEND1Q8N111 149 aa13.27□□□□□ -0.29
TNFRSF4-201ENST00000379236 GHRHP01286 108 aa13.24□□□□□ -0.29
TNFRSF4-201ENST00000379236 PRO1854Q9UHT4 67 aa13.23□□□□□ -0.29
TNFRSF4-201ENST00000379236 LST1O00453 97 aa13.22□□□□□ -0.29
TNFRSF4-201ENST00000379236 FAM218AQ96MZ4 157 aa13.21□□□□□ -0.29
TNFRSF4-201ENST00000379236 SS18L2Q9UHA2 77 aa13.2□□□□□ -0.3
TNFRSF4-201ENST00000379236 NDUFV3P56181 108 aaKnown RBP13.19□□□□□ -0.3
TNFRSF4-201ENST00000379236 A0A1B0GX51 115 aa13.18□□□□□ -0.3
TNFRSF4-201ENST00000379236 FABP2P12104 132 aa13.16□□□□□ -0.3
TNFRSF4-201ENST00000379236 FXYD2P54710 66 aa13.16□□□□□ -0.3
TNFRSF4-201ENST00000379236 Q6Q795 121 aa13.14□□□□□ -0.31
TNFRSF4-201ENST00000379236 TEN1Q86WV5 123 aa13.14□□□□□ -0.31
TNFRSF4-201ENST00000379236 OBSCN-AS1Q96MR7 158 aa13.14□□□□□ -0.31
TNFRSF4-201ENST00000379236 LCE2CQ5TA81 110 aa13.13□□□□□ -0.31
TNFRSF4-201ENST00000379236 H3BMG7 143 aa13.12□□□□□ -0.31
TNFRSF4-201ENST00000379236 TRIAP1O43715 76 aa13.11□□□□□ -0.31
TNFRSF4-201ENST00000379236 DNAL4O96015 105 aa13.11□□□□□ -0.31
TNFRSF4-201ENST00000379236 HSD52Q0P140 79 aa13.11□□□□□ -0.31
TNFRSF4-201ENST00000379236 PSMB2P49721 201 aa13.1□□□□□ -0.31
TNFRSF4-201ENST00000379236 KRTAP19-2Q3LHN2 52 aa13.09□□□□□ -0.31
TNFRSF4-201ENST00000379236 PYY3Q5JQD4 70 aa13.08□□□□□ -0.32
TNFRSF4-201ENST00000379236 ATP11AUNQ6ZP68 121 aa13.08□□□□□ -0.32
TNFRSF4-201ENST00000379236 A0A087WSZ3 146 aa13.07□□□□□ -0.32
TNFRSF4-201ENST00000379236 COX6B2Q6YFQ2 88 aa13.07□□□□□ -0.32
TNFRSF4-201ENST00000379236 MT1HP80294 61 aa13.05□□□□□ -0.32
TNFRSF4-201ENST00000379236 COX6CP09669 75 aa13.04□□□□□ -0.32
TNFRSF4-201ENST00000379236 Q75L30 129 aa13.04□□□□□ -0.32
TNFRSF4-201ENST00000379236 Q96NJ1 140 aa13.04□□□□□ -0.32
TNFRSF4-201ENST00000379236 ORMDL1Q9P0S3 153 aa13.04□□□□□ -0.32
TNFRSF4-201ENST00000379236 H3BQ85 93 aa13.02□□□□□ -0.33
TNFRSF4-201ENST00000379236 K7ERJ3 54 aa13.02□□□□□ -0.33
TNFRSF4-201ENST00000379236 TMA7Q9Y2S6 64 aaKnown RBP13.02□□□□□ -0.33
TNFRSF4-201ENST00000379236 UQCR10Q9UDW1 63 aa12.99□□□□□ -0.33
TNFRSF4-201ENST00000379236 A0A1B0GV72 72 aa12.98□□□□□ -0.33
TNFRSF4-201ENST00000379236 ANKRD29Q8N6D5 301 aa12.98□□□□□ -0.33
TNFRSF4-201ENST00000379236 M0R2T5 61 aa12.96□□□□□ -0.33
TNFRSF4-201ENST00000379236 TMEM256-PLSCR3K7ERE1 68 aa12.95□□□□□ -0.34
TNFRSF4-201ENST00000379236 SIGMAR1Q99720 223 aa12.95□□□□□ -0.34
TNFRSF4-201ENST00000379236 KRTAP9-6A0A140TA67 174 aa12.94□□□□□ -0.34
TNFRSF4-201ENST00000379236 A0A1W2PNM2 257 aa12.94□□□□□ -0.34
TNFRSF4-201ENST00000379236 LCE2DQ5TA82 110 aaPredicted RBP12.93□□□□□ -0.34
TNFRSF4-201ENST00000379236 TRBV7-4A0A0J9YYF1 115 aa12.89□□□□□ -0.35
TNFRSF4-201ENST00000379236 SCGB1C2P0DMR2 95 aa12.88□□□□□ -0.35
TNFRSF4-201ENST00000379236 C20orf166-AS1Q96NR2 134 aa12.88□□□□□ -0.35
TNFRSF4-201ENST00000379236 DSCR10P59022 87 aa12.87□□□□□ -0.35
TNFRSF4-201ENST00000379236 IGKV4-1P06312 121 aa12.86□□□□□ -0.35
TNFRSF4-201ENST00000379236 A8MUU9 505 aa12.85□□□□□ -0.35
TNFRSF4-201ENST00000379236 TRACP01848 142 aa12.85□□□□□ -0.35
TNFRSF4-201ENST00000379236 CCKP06307 115 aa12.85□□□□□ -0.35
TNFRSF4-201ENST00000379236 UBE2V1Q13404 147 aa12.84□□□□□ -0.35
TNFRSF4-201ENST00000379236 LINC00313P59037 77 aa12.81□□□□□ -0.36
TNFRSF4-201ENST00000379236 KRTAP10-6P60371 365 aaPredicted RBP12.81□□□□□ -0.36
TNFRSF4-201ENST00000379236 FLGP20930 4061 aaPredicted RBP12.8□□□□□ -0.36
TNFRSF4-201ENST00000379236 VPS25Q9BRG1 176 aa12.79□□□□□ -0.36
TNFRSF4-201ENST00000379236 LORP23490 312 aaPredicted RBP12.78□□□□□ -0.36
TNFRSF4-201ENST00000379236 TRBV20-1A0A075B6N2 111 aa12.76□□□□□ -0.37
TNFRSF4-201ENST00000379236 DEFB116Q30KQ4 102 aa12.76□□□□□ -0.37
TNFRSF4-201ENST00000379236 RBM3P98179 157 aaKnown RBP12.75□□□□□ -0.37
TNFRSF4-201ENST00000379236 DSCR8Q96T75 97 aa12.75□□□□□ -0.37
TNFRSF4-201ENST00000379236 LINC00472Q9H8W2 130 aa12.72□□□□□ -0.37
TNFRSF4-201ENST00000379236 IGHV6-1A0A0B4J1U7 121 aa12.7□□□□□ -0.38
TNFRSF4-201ENST00000379236 M0R143 59 aa12.68□□□□□ -0.38
TNFRSF4-201ENST00000379236 BAALC-AS2P0C853 105 aa12.68□□□□□ -0.38
TNFRSF4-201ENST00000379236 C9JAW5 83 aa12.66□□□□□ -0.38
TNFRSF4-201ENST00000379236 FSIP2Q5CZC0 6907 aa12.65□□□□□ -0.38
TNFRSF4-201ENST00000379236 KRTAP16-1A8MUX0 517 aa12.65□□□□□ -0.38
TNFRSF4-201ENST00000379236 C21orf62-AS1Q17RA5 79 aa12.65□□□□□ -0.38
TNFRSF4-201ENST00000379236 ATXN8Q156A1 80 aa12.63□□□□□ -0.39
TNFRSF4-201ENST00000379236 CRCT1Q9UGL9 99 aa12.63□□□□□ -0.39
TNFRSF4-201ENST00000379236 NOTCH2NLQ7Z3S9 236 aa12.62□□□□□ -0.39
TNFRSF4-201ENST00000379236 C8orf87E5RJ46 101 aa12.61□□□□□ -0.39
TNFRSF4-201ENST00000379236 A0A1B0GVX0 72 aa12.59□□□□□ -0.39
TNFRSF4-201ENST00000379236 FAM236DA0A1B0GTK5 79 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms