RNA–Protein interactions for RNA: ENST00000378980.7

CNTFR-202, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 2,052 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-202ENST00000378980 SMIM20Q8N5G0 67 aa13.32□□□□□ -0.28
CNTFR-202ENST00000378980 SPACA4Q8TDM5 124 aa13.32□□□□□ -0.28
CNTFR-202ENST00000378980 KMT2AQ03164 3969 aa13.31□□□□□ -0.28
CNTFR-202ENST00000378980 IGFL1Q6UW32 110 aa13.3□□□□□ -0.28
CNTFR-202ENST00000378980 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.3□□□□□ -0.28
CNTFR-202ENST00000378980 UBE2AP49459 152 aa13.29□□□□□ -0.28
CNTFR-202ENST00000378980 DPH3Q96FX2 82 aa13.28□□□□□ -0.28
CNTFR-202ENST00000378980 SPRR1BP22528 89 aa13.27□□□□□ -0.28
CNTFR-202ENST00000378980 DNAH2Q9P225 4427 aa13.26□□□□□ -0.29
CNTFR-202ENST00000378980 A0A0G2JQZ4 141 aa13.26□□□□□ -0.29
CNTFR-202ENST00000378980 SRRM2Q9UQ35 2752 aaKnown RBP13.25□□□□□ -0.29
CNTFR-202ENST00000378980 KRTAP13-1Q8IUC0 172 aa13.25□□□□□ -0.29
CNTFR-202ENST00000378980 RTL8CO15255 209 aa13.24□□□□□ -0.29
CNTFR-202ENST00000378980 DNAH17Q9UFH2 4485 aa13.23□□□□□ -0.29
CNTFR-202ENST00000378980 C20orf197Q8N268 126 aa13.22□□□□□ -0.29
CNTFR-202ENST00000378980 TMEM258P61165 79 aa13.19□□□□□ -0.3
CNTFR-202ENST00000378980 DSCR10P59022 87 aa13.17□□□□□ -0.3
CNTFR-202ENST00000378980 C1orf134Q5TEV5 83 aa13.16□□□□□ -0.3
CNTFR-202ENST00000378980 TGP01266 2768 aa13.15□□□□□ -0.3
CNTFR-202ENST00000378980 A0A087WSZ3 146 aa13.14□□□□□ -0.31
CNTFR-202ENST00000378980 FBN3Q75N90 2809 aa13.14□□□□□ -0.31
CNTFR-202ENST00000378980 DNAH6Q9C0G6 4158 aa13.13□□□□□ -0.31
CNTFR-202ENST00000378980 KLKP1Q107X0 134 aa13.12□□□□□ -0.31
CNTFR-202ENST00000378980 IGLV5-52A0A0A0MRZ9 124 aa13.11□□□□□ -0.31
CNTFR-202ENST00000378980 K7EQZ3 153 aa13.11□□□□□ -0.31
CNTFR-202ENST00000378980 OCR1Q9BZK8 76 aa13.11□□□□□ -0.31
CNTFR-202ENST00000378980 PLAC8Q9NZF1 115 aa13.11□□□□□ -0.31
CNTFR-202ENST00000378980 LY6G6CO95867 125 aa13.11□□□□□ -0.31
CNTFR-202ENST00000378980 PSORS1C2Q9UIG4 136 aa13.07□□□□□ -0.32
CNTFR-202ENST00000378980 SNURFQ9Y675 71 aa13.07□□□□□ -0.32
CNTFR-202ENST00000378980 DNAH8Q96JB1 4490 aa13.06□□□□□ -0.32
CNTFR-202ENST00000378980 H7BZZ5 65 aa13.05□□□□□ -0.32
CNTFR-202ENST00000378980 DEFB116Q30KQ4 102 aa13.04□□□□□ -0.32
CNTFR-202ENST00000378980 LINC00483Q53H64 154 aa13.03□□□□□ -0.32
CNTFR-202ENST00000378980 TMEM254Q8TBM7 123 aa13.02□□□□□ -0.33
CNTFR-202ENST00000378980 J3KT08 172 aa13.01□□□□□ -0.33
CNTFR-202ENST00000378980 ZNF706Q9Y5V0 76 aaPredicted RBP13□□□□□ -0.33
CNTFR-202ENST00000378980 HCG22E2RYF7 251 aa13□□□□□ -0.33
CNTFR-202ENST00000378980 FRAS1Q86XX4 4008 aa12.99□□□□□ -0.33
CNTFR-202ENST00000378980 RPS28P62857 69 aaKnown RBP12.99□□□□□ -0.33
CNTFR-202ENST00000378980 ALMS1Q8TCU4 4167 aa12.98□□□□□ -0.33
CNTFR-202ENST00000378980 IGLV9-49A0A0B4J1Y8 123 aa12.98□□□□□ -0.33
CNTFR-202ENST00000378980 WWC2-AS2Q96NR7 200 aa12.98□□□□□ -0.33
CNTFR-202ENST00000378980 FAM30AQ9NZY2 134 aa12.98□□□□□ -0.33
CNTFR-202ENST00000378980 ZNF861PO60384 105 aa12.97□□□□□ -0.33
CNTFR-202ENST00000378980 KRTAP21-3Q3LHN1 58 aa12.97□□□□□ -0.33
CNTFR-202ENST00000378980 LINC00472Q9H8W2 130 aa12.97□□□□□ -0.33
CNTFR-202ENST00000378980 NDUFC1O43677 76 aa12.96□□□□□ -0.33
CNTFR-202ENST00000378980 FAM236DA0A1B0GTK5 79 aa12.95□□□□□ -0.34
CNTFR-202ENST00000378980 FAM236CP0DP71 79 aa12.95□□□□□ -0.34
CNTFR-202ENST00000378980 RPL37AP61513 92 aaKnown RBP12.95□□□□□ -0.34
CNTFR-202ENST00000378980 A0A0U1RQV1 116 aa12.94□□□□□ -0.34
CNTFR-202ENST00000378980 DNAH5Q8TE73 4624 aa12.93□□□□□ -0.34
CNTFR-202ENST00000378980 DNAH11Q96DT5 4516 aa12.92□□□□□ -0.34
CNTFR-202ENST00000378980 LCE6AA0A183 80 aa12.92□□□□□ -0.34
CNTFR-202ENST00000378980 KRTAP10-2P60368 255 aa12.9□□□□□ -0.34
CNTFR-202ENST00000378980 A8MWP4 228 aa12.89□□□□□ -0.35
CNTFR-202ENST00000378980 PRR15Q8IV56 129 aa12.89□□□□□ -0.35
CNTFR-202ENST00000378980 WFDC13Q8IUB5 93 aa12.88□□□□□ -0.35
CNTFR-202ENST00000378980 IGLV7-43P04211 117 aa12.87□□□□□ -0.35
CNTFR-202ENST00000378980 MOBPQ13875 183 aa12.86□□□□□ -0.35
CNTFR-202ENST00000378980 ANAPC11Q9NYG5 84 aa12.86□□□□□ -0.35
CNTFR-202ENST00000378980 KRTAP29-1A8MX34 341 aaPredicted RBP12.85□□□□□ -0.35
CNTFR-202ENST00000378980 OXTP01178 125 aa12.85□□□□□ -0.35
CNTFR-202ENST00000378980 CIRBP-AS1Q8TBR5 109 aa12.83□□□□□ -0.36
CNTFR-202ENST00000378980 Q96NJ1 140 aa12.82□□□□□ -0.36
CNTFR-202ENST00000378980 HRCT1Q6UXD1 115 aa12.82□□□□□ -0.36
CNTFR-202ENST00000378980 PKD1P98161 4303 aa12.81□□□□□ -0.36
CNTFR-202ENST00000378980 HYDINQ4G0P3 5121 aa12.8□□□□□ -0.36
CNTFR-202ENST00000378980 CASC2Q6XLA1 102 aa12.8□□□□□ -0.36
CNTFR-202ENST00000378980 ATP5EP56381 51 aaPredicted RBP12.79□□□□□ -0.36
CNTFR-202ENST00000378980 C5orf47Q569G3 176 aa12.79□□□□□ -0.36
CNTFR-202ENST00000378980 FAT2Q9NYQ8 4349 aa12.79□□□□□ -0.36
CNTFR-202ENST00000378980 SERP1Q9Y6X1 66 aa12.78□□□□□ -0.36
CNTFR-202ENST00000378980 Q6ZSA8 131 aa12.77□□□□□ -0.37
CNTFR-202ENST00000378980 ZCCHC13Q8WW36 166 aaKnown RBP12.76□□□□□ -0.37
CNTFR-202ENST00000378980 NDUFB1O75438 58 aa12.75□□□□□ -0.37
CNTFR-202ENST00000378980 MMP24-AS1A0A0U1RRL7 71 aa12.74□□□□□ -0.37
CNTFR-202ENST00000378980 KRTAP10-1P60331 282 aa12.74□□□□□ -0.37
CNTFR-202ENST00000378980 MP68P56378 58 aa12.66□□□□□ -0.38
CNTFR-202ENST00000378980 hDV103S1A0JD37 113 aa12.66□□□□□ -0.38
CNTFR-202ENST00000378980 ASB16-AS1Q495Z4 193 aa12.64□□□□□ -0.39
CNTFR-202ENST00000378980 LRP1BQ9NZR2 4599 aa12.64□□□□□ -0.39
CNTFR-202ENST00000378980 A0A1B0GVX0 72 aa12.63□□□□□ -0.39
CNTFR-202ENST00000378980 C8orf17Q9NRJ1 99 aa12.63□□□□□ -0.39
CNTFR-202ENST00000378980 CD164Q04900 197 aa12.61□□□□□ -0.39
CNTFR-202ENST00000378980 SSBP3-AS1Q7Z2R9 100 aa12.61□□□□□ -0.39
CNTFR-202ENST00000378980 H0Y9P7 68 aa12.61□□□□□ -0.39
CNTFR-202ENST00000378980 CDK2AP2O75956 126 aa12.6□□□□□ -0.39
CNTFR-202ENST00000378980 IGHV6-1A0A0B4J1U7 121 aa12.59□□□□□ -0.39
CNTFR-202ENST00000378980 LINC00208Q96KT6 92 aa12.59□□□□□ -0.39
CNTFR-202ENST00000378980 H3BPC8 53 aa12.58□□□□□ -0.39
CNTFR-202ENST00000378980 Q5XG85 94 aa12.57□□□□□ -0.4
CNTFR-202ENST00000378980 TRAV22A0A0B4J277 110 aa12.57□□□□□ -0.4
CNTFR-202ENST00000378980 SACSQ9NZJ4 4579 aa12.55□□□□□ -0.4
CNTFR-202ENST00000378980 A0A087X002 238 aa12.55□□□□□ -0.4
CNTFR-202ENST00000378980 VPS13BQ7Z7G8 4022 aa12.53□□□□□ -0.4
CNTFR-202ENST00000378980 C4orf26Q17RF5 130 aa12.52□□□□□ -0.4
CNTFR-202ENST00000378980 KRTAP13-2Q52LG2 175 aa12.52□□□□□ -0.4
CNTFR-202ENST00000378980 SMIM26A0A096LP01 95 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms