RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 PLA2G2DQ9UNK4 145 aa9.74□□□□□ -0.85
NPHP4-201ENST00000378156 C8orf17Q9NRJ1 99 aa9.74□□□□□ -0.85
NPHP4-201ENST00000378156 PLA2G1BP04054 148 aaKnown RBP9.74□□□□□ -0.85
NPHP4-201ENST00000378156 USP34Q70CQ2 3546 aa9.73□□□□□ -0.85
NPHP4-201ENST00000378156 SSBP3-AS1Q7Z2R9 100 aa9.73□□□□□ -0.85
NPHP4-201ENST00000378156 SPANXA2-OT1Q8N9U9 137 aa9.73□□□□□ -0.85
NPHP4-201ENST00000378156 A0A0G2JQZ4 141 aa9.72□□□□□ -0.85
NPHP4-201ENST00000378156 A0A1W2PNN7 141 aa9.72□□□□□ -0.85
NPHP4-201ENST00000378156 ZZEF1O43149 2961 aa9.72□□□□□ -0.85
NPHP4-201ENST00000378156 OBSCN-AS1Q96MR7 158 aa9.72□□□□□ -0.85
NPHP4-201ENST00000378156 WIPF1O43516 503 aa9.72□□□□□ -0.85
NPHP4-201ENST00000378156 ZNF861PO60384 105 aa9.71□□□□□ -0.85
NPHP4-201ENST00000378156 LOC400499M0QZD8 3231 aa9.7□□□□□ -0.86
NPHP4-201ENST00000378156 UBR5O95071 2799 aaPredicted RBP9.7□□□□□ -0.86
NPHP4-201ENST00000378156 Q96NJ1 140 aa9.69□□□□□ -0.86
NPHP4-201ENST00000378156 CNBPP62633 177 aaKnown RBP9.68□□□□□ -0.86
NPHP4-201ENST00000378156 A0A1B0GVX0 72 aa9.68□□□□□ -0.86
NPHP4-201ENST00000378156 TNRC18O15417 2968 aaPredicted RBP9.67□□□□□ -0.86
NPHP4-201ENST00000378156 ITPR1Q14643 2758 aa9.67□□□□□ -0.86
NPHP4-201ENST00000378156 NBEAL1Q6ZS30 2694 aa9.67□□□□□ -0.86
NPHP4-201ENST00000378156 DMXL1Q9Y485 3027 aa9.66□□□□□ -0.86
NPHP4-201ENST00000378156 CRIPTQ9P021 101 aa9.65□□□□□ -0.87
NPHP4-201ENST00000378156 CDC42SE1Q9NRR8 79 aa9.64□□□□□ -0.87
NPHP4-201ENST00000378156 Q8NDZ9 215 aa9.63□□□□□ -0.87
NPHP4-201ENST00000378156 A0A1W2PNM2 257 aa9.63□□□□□ -0.87
NPHP4-201ENST00000378156 PSORS1C2Q9UIG4 136 aa9.61□□□□□ -0.87
NPHP4-201ENST00000378156 Q1T7F1 81 aa9.61□□□□□ -0.87
NPHP4-201ENST00000378156 BAHCC1Q9P281 2608 aa9.6□□□□□ -0.87
NPHP4-201ENST00000378156 ANAPC11Q9NYG5 84 aa9.58□□□□□ -0.88
NPHP4-201ENST00000378156 IGLV7-43P04211 117 aa9.58□□□□□ -0.88
NPHP4-201ENST00000378156 IGLV5-48A0A075B6I7 105 aa9.57□□□□□ -0.88
NPHP4-201ENST00000378156 SMR3BP02814 79 aaPredicted RBP9.57□□□□□ -0.88
NPHP4-201ENST00000378156 OCR1Q9BZK8 76 aa9.57□□□□□ -0.88
NPHP4-201ENST00000378156 IGLV5-37A0A075B6J1 123 aa9.57□□□□□ -0.88
NPHP4-201ENST00000378156 DSCR10P59022 87 aa9.57□□□□□ -0.88
NPHP4-201ENST00000378156 LINC00304Q8N9R0 145 aa9.55□□□□□ -0.88
NPHP4-201ENST00000378156 SPRR4Q96PI1 79 aa9.55□□□□□ -0.88
NPHP4-201ENST00000378156 ASH1LQ9NR48 2969 aaKnown RBP9.51□□□□□ -0.89
NPHP4-201ENST00000378156 TNP2Q05952 138 aa9.5□□□□□ -0.89
NPHP4-201ENST00000378156 NSD1Q96L73 2696 aaPredicted RBP9.48□□□□□ -0.89
NPHP4-201ENST00000378156 UTP20O75691 2785 aaKnown RBP9.48□□□□□ -0.89
NPHP4-201ENST00000378156 ZANQ9Y493 2812 aa9.48□□□□□ -0.89
NPHP4-201ENST00000378156 J3QL48 77 aa9.47□□□□□ -0.89
NPHP4-201ENST00000378156 CYSTM1Q9H1C7 97 aa9.44□□□□□ -0.9
NPHP4-201ENST00000378156 IGLV7-46A0A075B6I9 117 aa9.43□□□□□ -0.9
NPHP4-201ENST00000378156 Q75L30 129 aa9.43□□□□□ -0.9
NPHP4-201ENST00000378156 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.43□□□□□ -0.9
NPHP4-201ENST00000378156 WDFY3Q8IZQ1 3526 aa9.41□□□□□ -0.9
NPHP4-201ENST00000378156 Q5XG85 94 aa9.41□□□□□ -0.9
NPHP4-201ENST00000378156 ITPR2Q14571 2701 aa9.4□□□□□ -0.91
NPHP4-201ENST00000378156 HRNRQ86YZ3 2850 aaPredicted RBP9.4□□□□□ -0.91
NPHP4-201ENST00000378156 C9orf92A6NGG3 77 aa9.4□□□□□ -0.91
NPHP4-201ENST00000378156 PRR26Q8N8Z3 221 aa9.4□□□□□ -0.91
NPHP4-201ENST00000378156 RBM12B-AS1Q9P1G2 102 aa9.39□□□□□ -0.91
NPHP4-201ENST00000378156 KRTAP26-1Q6PEX3 210 aa9.35□□□□□ -0.91
NPHP4-201ENST00000378156 LINC01558Q9Y6Z2 57 aa9.34□□□□□ -0.91
NPHP4-201ENST00000378156 SPRR1AP35321 89 aa9.34□□□□□ -0.91
NPHP4-201ENST00000378156 FP248Q71RG6 208 aaPredicted RBP9.33□□□□□ -0.92
NPHP4-201ENST00000378156 Q8N9P0 234 aaPredicted RBP9.33□□□□□ -0.92
NPHP4-201ENST00000378156 STAB2Q8WWQ8 2551 aa9.33□□□□□ -0.92
NPHP4-201ENST00000378156 LINC01554Q52M75 96 aa9.31□□□□□ -0.92
NPHP4-201ENST00000378156 Q8N1X5 172 aa9.3□□□□□ -0.92
NPHP4-201ENST00000378156 CELSR2Q9HCU4 2923 aa9.3□□□□□ -0.92
NPHP4-201ENST00000378156 KRTAP1-5Q9BYS1 174 aa9.3□□□□□ -0.92
NPHP4-201ENST00000378156 APCP25054 2843 aa9.29□□□□□ -0.92
NPHP4-201ENST00000378156 LUZP6Q538Z0 58 aa9.29□□□□□ -0.92
NPHP4-201ENST00000378156 PLAC8Q9NZF1 115 aa9.29□□□□□ -0.92
NPHP4-201ENST00000378156 A0A0D9SG42 100 aa9.26□□□□□ -0.93
NPHP4-201ENST00000378156 FAM229BQ4G0N7 80 aa9.26□□□□□ -0.93
NPHP4-201ENST00000378156 A0A1B0GU33 70 aa9.24□□□□□ -0.93
NPHP4-201ENST00000378156 HIVEP1P15822 2718 aa9.24□□□□□ -0.93
NPHP4-201ENST00000378156 COX6B2Q6YFQ2 88 aa9.24□□□□□ -0.93
NPHP4-201ENST00000378156 HRES1P13985 223 aa9.24□□□□□ -0.93
NPHP4-201ENST00000378156 NF1P21359 2839 aa9.24□□□□□ -0.93
NPHP4-201ENST00000378156 FBN2P35556 2912 aa9.23□□□□□ -0.93
NPHP4-201ENST00000378156 RELNP78509 3460 aa9.23□□□□□ -0.93
NPHP4-201ENST00000378156 ASPMQ8IZT6 3477 aa9.23□□□□□ -0.93
NPHP4-201ENST00000378156 CRYBG3Q68DQ2 2970 aa9.23□□□□□ -0.93
NPHP4-201ENST00000378156 DCHS1Q96JQ0 3298 aa9.22□□□□□ -0.93
NPHP4-201ENST00000378156 Q5VV11 94 aa9.21□□□□□ -0.94
NPHP4-201ENST00000378156 MMP24-AS1A0A0U1RRL7 71 aa9.2□□□□□ -0.94
NPHP4-201ENST00000378156 MUC3AQ02505 3323 aa9.19□□□□□ -0.94
NPHP4-201ENST00000378156 NIPBLQ6KC79 2804 aaeCLIP9.18□□□□□ -0.94
NPHP4-201ENST00000378156 ZFHX4Q86UP3 3567 aa9.18□□□□□ -0.94
NPHP4-201ENST00000378156 LAMA5O15230 3695 aa9.17□□□□□ -0.94
NPHP4-201ENST00000378156 SPRR1BP22528 89 aa9.17□□□□□ -0.94
NPHP4-201ENST00000378156 DCHS2Q6V1P9 2916 aa9.17□□□□□ -0.94
NPHP4-201ENST00000378156 OXTP01178 125 aa9.15□□□□□ -0.94
NPHP4-201ENST00000378156 DMDP11532 3685 aa9.15□□□□□ -0.95
NPHP4-201ENST00000378156 H3BS24 57 aa9.13□□□□□ -0.95
NPHP4-201ENST00000378156 KRTAP4-16G5E9R7 235 aaPredicted RBP9.12□□□□□ -0.95
NPHP4-201ENST00000378156 PRAC1Q96KF2 57 aa9.12□□□□□ -0.95
NPHP4-201ENST00000378156 LINC00472Q9H8W2 130 aa9.12□□□□□ -0.95
NPHP4-201ENST00000378156 KMT2BQ9UMN6 2715 aaPredicted RBP9.11□□□□□ -0.95
NPHP4-201ENST00000378156 DMAC1Q96GE9 116 aa9.1□□□□□ -0.95
NPHP4-201ENST00000378156 TENM4Q6N022 2769 aa9.09□□□□□ -0.95
NPHP4-201ENST00000378156 SPINK7P58062 85 aa9.07□□□□□ -0.96
NPHP4-201ENST00000378156 FLG2Q5D862 2391 aaPredicted RBP9.07□□□□□ -0.96
NPHP4-201ENST00000378156 MXRA5Q9NR99 2828 aa9.06□□□□□ -0.96
NPHP4-201ENST00000378156 KRTAP10-2P60368 255 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms