RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 SPRR1AP35321 89 aa10.59□□□□□ -0.71
PCDHA1-201ENST00000378133 IGLV5-37A0A075B6J1 123 aa10.58□□□□□ -0.72
PCDHA1-201ENST00000378133 CYP4F30PQ9H0H9 118 aa10.57□□□□□ -0.72
PCDHA1-201ENST00000378133 DNAH1Q9P2D7 4330 aa10.56□□□□□ -0.72
PCDHA1-201ENST00000378133 UBE2BP63146 152 aa10.55□□□□□ -0.72
PCDHA1-201ENST00000378133 NBEAL1Q6ZS30 2694 aa10.55□□□□□ -0.72
PCDHA1-201ENST00000378133 PSCAO43653 123 aa10.55□□□□□ -0.72
PCDHA1-201ENST00000378133 A8MUN3 132 aa10.54□□□□□ -0.72
PCDHA1-201ENST00000378133 NDUFB1O75438 58 aa10.53□□□□□ -0.72
PCDHA1-201ENST00000378133 DEFB116Q30KQ4 102 aa10.52□□□□□ -0.72
PCDHA1-201ENST00000378133 A0A0G2JQZ4 141 aa10.52□□□□□ -0.73
PCDHA1-201ENST00000378133 A0A1W2PNN7 141 aa10.52□□□□□ -0.73
PCDHA1-201ENST00000378133 LINC00476Q8WZB0 136 aa10.52□□□□□ -0.73
PCDHA1-201ENST00000378133 KTN1-AS1Q86SY8 53 aa10.51□□□□□ -0.73
PCDHA1-201ENST00000378133 WFDC13Q8IUB5 93 aa10.51□□□□□ -0.73
PCDHA1-201ENST00000378133 C4orf48Q5BLP8 95 aa10.5□□□□□ -0.73
PCDHA1-201ENST00000378133 MP68P56378 58 aa10.49□□□□□ -0.73
PCDHA1-201ENST00000378133 REG3GQ6UW15 175 aa10.49□□□□□ -0.73
PCDHA1-201ENST00000378133 HUWE1Q7Z6Z7 4374 aaKnown RBP10.49□□□□□ -0.73
PCDHA1-201ENST00000378133 IGFL1Q6UW32 110 aa10.47□□□□□ -0.73
PCDHA1-201ENST00000378133 LINC00208Q96KT6 92 aa10.46□□□□□ -0.73
PCDHA1-201ENST00000378133 DNAH10Q8IVF4 4471 aa10.45□□□□□ -0.74
PCDHA1-201ENST00000378133 K7EIL1 84 aa10.45□□□□□ -0.74
PCDHA1-201ENST00000378133 B9D2Q9BPU9 175 aa10.45□□□□□ -0.74
PCDHA1-201ENST00000378133 IGKV2-24A0A0C4DH68 120 aa10.45□□□□□ -0.74
PCDHA1-201ENST00000378133 Q5VV11 94 aa10.45□□□□□ -0.74
PCDHA1-201ENST00000378133 LYSTQ99698 3801 aa10.44□□□□□ -0.74
PCDHA1-201ENST00000378133 A0A087WSZ3 146 aa10.43□□□□□ -0.74
PCDHA1-201ENST00000378133 C16orf90A8MZG2 172 aa10.43□□□□□ -0.74
PCDHA1-201ENST00000378133 SPTSSBQ8NFR3 76 aa10.43□□□□□ -0.74
PCDHA1-201ENST00000378133 A0A096LNI7 61 aa10.43□□□□□ -0.74
PCDHA1-201ENST00000378133 RPL37AP61513 92 aaKnown RBP10.42□□□□□ -0.74
PCDHA1-201ENST00000378133 PRLHP81277 87 aa10.42□□□□□ -0.74
PCDHA1-201ENST00000378133 KRTAP1-5Q9BYS1 174 aa10.42□□□□□ -0.74
PCDHA1-201ENST00000378133 MGAM2Q2M2H8 2515 aa10.41□□□□□ -0.74
PCDHA1-201ENST00000378133 CHKB-CPT1BH3BT56 60 aa10.38□□□□□ -0.75
PCDHA1-201ENST00000378133 KRTAP29-1A8MX34 341 aaPredicted RBP10.38□□□□□ -0.75
PCDHA1-201ENST00000378133 H0Y9P7 68 aa10.38□□□□□ -0.75
PCDHA1-201ENST00000378133 STAB2Q8WWQ8 2551 aa10.37□□□□□ -0.75
PCDHA1-201ENST00000378133 SPANXA2-OT1Q8N9U9 137 aa10.36□□□□□ -0.75
PCDHA1-201ENST00000378133 DNAH9Q9NYC9 4486 aa10.36□□□□□ -0.75
PCDHA1-201ENST00000378133 CASC2Q6XLA1 102 aa10.36□□□□□ -0.75
PCDHA1-201ENST00000378133 SRRM2Q9UQ35 2752 aaKnown RBP10.36□□□□□ -0.75
PCDHA1-201ENST00000378133 CSMD3Q7Z407 3707 aa10.35□□□□□ -0.75
PCDHA1-201ENST00000378133 IGLV8-61A0A075B6I0 122 aa10.35□□□□□ -0.75
PCDHA1-201ENST00000378133 Q8N9P0 234 aaPredicted RBP10.34□□□□□ -0.75
PCDHA1-201ENST00000378133 H3BPC8 53 aa10.34□□□□□ -0.75
PCDHA1-201ENST00000378133 UBE2AP49459 152 aa10.34□□□□□ -0.75
PCDHA1-201ENST00000378133 CNBPP62633 177 aaKnown RBP10.34□□□□□ -0.75
PCDHA1-201ENST00000378133 COL7A1Q02388 2944 aa10.33□□□□□ -0.76
PCDHA1-201ENST00000378133 LCA10Q71F78 164 aa10.33□□□□□ -0.76
PCDHA1-201ENST00000378133 CHTF8P0CG12 524 aa10.33□□□□□ -0.76
PCDHA1-201ENST00000378133 LIMD2Q9BT23 127 aa10.32□□□□□ -0.76
PCDHA1-201ENST00000378133 DNHD1Q96M86 4753 aa10.32□□□□□ -0.76
PCDHA1-201ENST00000378133 KRTAP11-1Q8IUC1 163 aa10.32□□□□□ -0.76
PCDHA1-201ENST00000378133 PHF5AQ7RTV0 110 aaKnown RBP10.31□□□□□ -0.76
PCDHA1-201ENST00000378133 TENM2Q9NT68 2774 aa10.31□□□□□ -0.76
PCDHA1-201ENST00000378133 A6NN06 94 aa10.3□□□□□ -0.76
PCDHA1-201ENST00000378133 UBE2DNLQ8IWF7 75 aa10.3□□□□□ -0.76
PCDHA1-201ENST00000378133 PRR15LQ9BU68 103 aa10.29□□□□□ -0.76
PCDHA1-201ENST00000378133 NDUFS5O43920 106 aa10.29□□□□□ -0.76
PCDHA1-201ENST00000378133 ATP11AUNQ6ZP68 121 aa10.28□□□□□ -0.76
PCDHA1-201ENST00000378133 A8MWP4 228 aa10.27□□□□□ -0.77
PCDHA1-201ENST00000378133 C9orf163Q8N9P6 203 aa10.27□□□□□ -0.77
PCDHA1-201ENST00000378133 C8orf87E5RJ46 101 aa10.26□□□□□ -0.77
PCDHA1-201ENST00000378133 LINC00472Q9H8W2 130 aa10.25□□□□□ -0.77
PCDHA1-201ENST00000378133 APLNQ9ULZ1 77 aa10.24□□□□□ -0.77
PCDHA1-201ENST00000378133 DNAH7Q8WXX0 4024 aa10.23□□□□□ -0.77
PCDHA1-201ENST00000378133 A6NED7 52 aa10.22□□□□□ -0.77
PCDHA1-201ENST00000378133 H0Y9J4 135 aa10.22□□□□□ -0.77
PCDHA1-201ENST00000378133 C14orf177Q52M58 125 aa10.22□□□□□ -0.77
PCDHA1-201ENST00000378133 COA5Q86WW8 74 aa10.21□□□□□ -0.77
PCDHA1-201ENST00000378133 H3BS24 57 aa10.2□□□□□ -0.78
PCDHA1-201ENST00000378133 IGLV7-46A0A075B6I9 117 aa10.19□□□□□ -0.78
PCDHA1-201ENST00000378133 C7orf65Q6ZTY9 151 aa10.19□□□□□ -0.78
PCDHA1-201ENST00000378133 SPRR1BP22528 89 aa10.18□□□□□ -0.78
PCDHA1-201ENST00000378133 Q75L30 129 aa10.18□□□□□ -0.78
PCDHA1-201ENST00000378133 MMP24-AS1A0A0U1RRL7 71 aa10.16□□□□□ -0.78
PCDHA1-201ENST00000378133 PANO1I0J062 215 aa10.16□□□□□ -0.78
PCDHA1-201ENST00000378133 LOC101927531A0A1B0GV80 90 aa10.16□□□□□ -0.78
PCDHA1-201ENST00000378133 MEGF8Q7Z7M0 2845 aa10.15□□□□□ -0.78
PCDHA1-201ENST00000378133 PCOTHQ58A44 107 aa10.15□□□□□ -0.78
PCDHA1-201ENST00000378133 PRKDCP78527 4128 aaKnown RBP10.15□□□□□ -0.79
PCDHA1-201ENST00000378133 KRTAP21-3Q3LHN1 58 aa10.13□□□□□ -0.79
PCDHA1-201ENST00000378133 PLECQ15149 4684 aaKnown RBP10.12□□□□□ -0.79
PCDHA1-201ENST00000378133 MOBPQ13875 183 aa10.12□□□□□ -0.79
PCDHA1-201ENST00000378133 NBDYA0A0U1RRE5 68 aa10.11□□□□□ -0.79
PCDHA1-201ENST00000378133 CDC42SE1Q9NRR8 79 aa10.11□□□□□ -0.79
PCDHA1-201ENST00000378133 DYNC2H1Q8NCM8 4307 aaKnown RBP10.1□□□□□ -0.79
PCDHA1-201ENST00000378133 SPAG11AQ6PDA7 123 aa10.08□□□□□ -0.8
PCDHA1-201ENST00000378133 Q6ZRN7 208 aaPredicted RBP10.07□□□□□ -0.8
PCDHA1-201ENST00000378133 KRTAP13-1Q8IUC0 172 aa10.07□□□□□ -0.8
PCDHA1-201ENST00000378133 TP53AIP1Q9HCN2 124 aa10.07□□□□□ -0.8
PCDHA1-201ENST00000378133 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.06□□□□□ -0.8
PCDHA1-201ENST00000378133 IGLV9-49A0A0B4J1Y8 123 aa10.05□□□□□ -0.8
PCDHA1-201ENST00000378133 LINC01558Q9Y6Z2 57 aa10.05□□□□□ -0.8
PCDHA1-201ENST00000378133 ASB16-AS1Q495Z4 193 aa10.03□□□□□ -0.8
PCDHA1-201ENST00000378133 PRAC1Q96KF2 57 aa10.03□□□□□ -0.8
PCDHA1-201ENST00000378133 Q96NJ1 140 aa10.02□□□□□ -0.81
PCDHA1-201ENST00000378133 Q6ZR54 194 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms