RNA–Protein interactions for RNA: ENST00000377843.6

CSNK1A1-202, Transcript of casein kinase 1 alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1A1, Length 2,559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-202ENST00000377843 SPART-AS1P0CW21 52 aa9.98□□□□□ -0.81
CSNK1A1-202ENST00000377843 MRPL55Q7Z7F7 128 aaKnown RBP9.98□□□□□ -0.81
CSNK1A1-202ENST00000377843 LINC00476Q8WZB0 136 aa9.98□□□□□ -0.81
CSNK1A1-202ENST00000377843 SPRR1AP35321 89 aa9.97□□□□□ -0.81
CSNK1A1-202ENST00000377843 KRTAP7-1Q8IUC3 87 aa9.97□□□□□ -0.81
CSNK1A1-202ENST00000377843 LIMD2Q9BT23 127 aa9.97□□□□□ -0.81
CSNK1A1-202ENST00000377843 IGLV1-50A0A075B6I6 118 aa9.96□□□□□ -0.81
CSNK1A1-202ENST00000377843 IGKV2D-24A0A075B6R9 120 aa9.96□□□□□ -0.81
CSNK1A1-202ENST00000377843 KRTAP29-1A8MX34 341 aaPredicted RBP9.95□□□□□ -0.82
CSNK1A1-202ENST00000377843 SPANXA2-OT1Q8N9U9 137 aa9.95□□□□□ -0.82
CSNK1A1-202ENST00000377843 H0Y9P7 68 aa9.94□□□□□ -0.82
CSNK1A1-202ENST00000377843 IGFL1Q6UW32 110 aa9.94□□□□□ -0.82
CSNK1A1-202ENST00000377843 NOTCH1P46531 2555 aa9.93□□□□□ -0.82
CSNK1A1-202ENST00000377843 A6NN06 94 aa9.93□□□□□ -0.82
CSNK1A1-202ENST00000377843 Q75L30 129 aa9.92□□□□□ -0.82
CSNK1A1-202ENST00000377843 KRTAP24-1Q3LI83 254 aa9.91□□□□□ -0.82
CSNK1A1-202ENST00000377843 A0A087WSZ3 146 aa9.91□□□□□ -0.82
CSNK1A1-202ENST00000377843 APOC4P55056 127 aa9.91□□□□□ -0.82
CSNK1A1-202ENST00000377843 ATP11AUNQ6ZP68 121 aa9.91□□□□□ -0.82
CSNK1A1-202ENST00000377843 C9orf163Q8N9P6 203 aa9.9□□□□□ -0.82
CSNK1A1-202ENST00000377843 A6NED7 52 aa9.9□□□□□ -0.82
CSNK1A1-202ENST00000377843 LOC101927531A0A1B0GV80 90 aa9.88□□□□□ -0.83
CSNK1A1-202ENST00000377843 CMYA5Q8N3K9 4069 aa9.88□□□□□ -0.83
CSNK1A1-202ENST00000377843 COA5Q86WW8 74 aa9.87□□□□□ -0.83
CSNK1A1-202ENST00000377843 PLA2G2DQ9UNK4 145 aa9.87□□□□□ -0.83
CSNK1A1-202ENST00000377843 CNBPP62633 177 aaKnown RBP9.87□□□□□ -0.83
CSNK1A1-202ENST00000377843 OXLD1Q5BKU9 147 aa9.86□□□□□ -0.83
CSNK1A1-202ENST00000377843 CASC2Q6XLA1 102 aa9.86□□□□□ -0.83
CSNK1A1-202ENST00000377843 IGLV5-37A0A075B6J1 123 aa9.85□□□□□ -0.83
CSNK1A1-202ENST00000377843 PHF5AQ7RTV0 110 aaKnown RBP9.85□□□□□ -0.83
CSNK1A1-202ENST00000377843 TLX1NBP0CAT3 122 aa9.84□□□□□ -0.83
CSNK1A1-202ENST00000377843 NBEAL1Q6ZS30 2694 aa9.83□□□□□ -0.84
CSNK1A1-202ENST00000377843 H3BPC8 53 aa9.83□□□□□ -0.84
CSNK1A1-202ENST00000377843 CASC10Q5T4H9 136 aa9.82□□□□□ -0.84
CSNK1A1-202ENST00000377843 NDUFS5O43920 106 aa9.82□□□□□ -0.84
CSNK1A1-202ENST00000377843 CDC42SE1Q9NRR8 79 aa9.82□□□□□ -0.84
CSNK1A1-202ENST00000377843 MOBPQ13875 183 aa9.8□□□□□ -0.84
CSNK1A1-202ENST00000377843 MGAM2Q2M2H8 2515 aa9.79□□□□□ -0.84
CSNK1A1-202ENST00000377843 IGLV7-46A0A075B6I9 117 aa9.78□□□□□ -0.84
CSNK1A1-202ENST00000377843 REG3GQ6UW15 175 aa9.78□□□□□ -0.84
CSNK1A1-202ENST00000377843 PRLHP81277 87 aa9.78□□□□□ -0.84
CSNK1A1-202ENST00000377843 LINC01556Q5JQF7 62 aa9.78□□□□□ -0.84
CSNK1A1-202ENST00000377843 SPAG11AQ6PDA7 123 aa9.77□□□□□ -0.85
CSNK1A1-202ENST00000377843 IGLV8-61A0A075B6I0 122 aa9.76□□□□□ -0.85
CSNK1A1-202ENST00000377843 PLAC8Q9NZF1 115 aa9.76□□□□□ -0.85
CSNK1A1-202ENST00000377843 TENM3Q9P273 2699 aa9.76□□□□□ -0.85
CSNK1A1-202ENST00000377843 PCOTHQ58A44 107 aa9.76□□□□□ -0.85
CSNK1A1-202ENST00000377843 SRRM2Q9UQ35 2752 aaKnown RBP9.76□□□□□ -0.85
CSNK1A1-202ENST00000377843 SPINK7P58062 85 aa9.75□□□□□ -0.85
CSNK1A1-202ENST00000377843 C7orf65Q6ZTY9 151 aa9.75□□□□□ -0.85
CSNK1A1-202ENST00000377843 H3BNG1 76 aa9.75□□□□□ -0.85
CSNK1A1-202ENST00000377843 KRTAP10-11P60412 298 aa9.75□□□□□ -0.85
CSNK1A1-202ENST00000377843 A8MWP4 228 aa9.74□□□□□ -0.85
CSNK1A1-202ENST00000377843 LINC00472Q9H8W2 130 aa9.73□□□□□ -0.85
CSNK1A1-202ENST00000377843 LINC01558Q9Y6Z2 57 aa9.73□□□□□ -0.85
CSNK1A1-202ENST00000377843 MMP24-AS1A0A0U1RRL7 71 aa9.71□□□□□ -0.86
CSNK1A1-202ENST00000377843 C11orf45Q8TAV5 145 aa9.71□□□□□ -0.86
CSNK1A1-202ENST00000377843 DNAH1Q9P2D7 4330 aa9.71□□□□□ -0.86
CSNK1A1-202ENST00000377843 CSMD3Q7Z407 3707 aa9.7□□□□□ -0.86
CSNK1A1-202ENST00000377843 H0Y9J4 135 aa9.66□□□□□ -0.86
CSNK1A1-202ENST00000377843 DNAH10OSP0CZ25 163 aa9.66□□□□□ -0.86
CSNK1A1-202ENST00000377843 HRES1P13985 223 aa9.64□□□□□ -0.87
CSNK1A1-202ENST00000377843 DNAH3Q8TD57 4116 aa9.64□□□□□ -0.87
CSNK1A1-202ENST00000377843 TENM2Q9NT68 2774 aa9.63□□□□□ -0.87
CSNK1A1-202ENST00000377843 KRTAP11-1Q8IUC1 163 aa9.63□□□□□ -0.87
CSNK1A1-202ENST00000377843 MDFIQ99750 246 aa9.63□□□□□ -0.87
CSNK1A1-202ENST00000377843 A0A096LNI7 61 aa9.62□□□□□ -0.87
CSNK1A1-202ENST00000377843 C8orf87E5RJ46 101 aa9.62□□□□□ -0.87
CSNK1A1-202ENST00000377843 PRAC1Q96KF2 57 aa9.61□□□□□ -0.87
CSNK1A1-202ENST00000377843 DEFB131BA0A096LNP1 70 aa9.61□□□□□ -0.87
CSNK1A1-202ENST00000377843 IGKV2-24A0A0C4DH68 120 aa9.59□□□□□ -0.87
CSNK1A1-202ENST00000377843 LINC00313P59037 77 aa9.58□□□□□ -0.88
CSNK1A1-202ENST00000377843 ASB16-AS1Q495Z4 193 aa9.58□□□□□ -0.88
CSNK1A1-202ENST00000377843 DNAH10Q8IVF4 4471 aa9.56□□□□□ -0.88
CSNK1A1-202ENST00000377843 Q6ZR54 194 aa9.56□□□□□ -0.88
CSNK1A1-202ENST00000377843 ADM2Q7Z4H4 148 aa9.56□□□□□ -0.88
CSNK1A1-202ENST00000377843 SPRR1BP22528 89 aa9.55□□□□□ -0.88
CSNK1A1-202ENST00000377843 Q96NJ1 140 aa9.55□□□□□ -0.88
CSNK1A1-202ENST00000377843 COL7A1Q02388 2944 aa9.55□□□□□ -0.88
CSNK1A1-202ENST00000377843 DNHD1Q96M86 4753 aa9.55□□□□□ -0.88
CSNK1A1-202ENST00000377843 PRR26Q8N8Z3 221 aa9.53□□□□□ -0.88
CSNK1A1-202ENST00000377843 C4orf48Q5BLP8 95 aa9.52□□□□□ -0.89
CSNK1A1-202ENST00000377843 TP53AIP1Q9HCN2 124 aa9.51□□□□□ -0.89
CSNK1A1-202ENST00000377843 LYSTQ99698 3801 aa9.51□□□□□ -0.89
CSNK1A1-202ENST00000377843 C8orf17Q9NRJ1 99 aa9.5□□□□□ -0.89
CSNK1A1-202ENST00000377843 STAB2Q8WWQ8 2551 aa9.5□□□□□ -0.89
CSNK1A1-202ENST00000377843 HUWE1Q7Z6Z7 4374 aaKnown RBP9.49□□□□□ -0.89
CSNK1A1-202ENST00000377843 CHTF8P0CG12 524 aa9.48□□□□□ -0.89
CSNK1A1-202ENST00000377843 K7EIL1 84 aa9.47□□□□□ -0.89
CSNK1A1-202ENST00000377843 A0A087X002 238 aa9.44□□□□□ -0.9
CSNK1A1-202ENST00000377843 IGHV6-1A0A0B4J1U7 121 aa9.44□□□□□ -0.9
CSNK1A1-202ENST00000377843 NOTCH2NLQ7Z3S9 236 aa9.44□□□□□ -0.9
CSNK1A1-202ENST00000377843 IGLV9-49A0A0B4J1Y8 123 aa9.4□□□□□ -0.9
CSNK1A1-202ENST00000377843 PLA2G1BP04054 148 aaKnown RBP9.4□□□□□ -0.9
CSNK1A1-202ENST00000377843 ALMS1Q8TCU4 4167 aa9.39□□□□□ -0.91
CSNK1A1-202ENST00000377843 A0A1B0GVX0 72 aa9.39□□□□□ -0.91
CSNK1A1-202ENST00000377843 MRPL34Q9BQ48 92 aaKnown RBP9.38□□□□□ -0.91
CSNK1A1-202ENST00000377843 Q5W150 140 aa9.38□□□□□ -0.91
CSNK1A1-202ENST00000377843 KRTAP1-5Q9BYS1 174 aa9.38□□□□□ -0.91
CSNK1A1-202ENST00000377843 LINC01554Q52M75 96 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms