RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 TENM2Q9NT68 2774 aa12.83□□□□□ -0.36
CLN5-201ENST00000377453 MDFIQ99750 246 aa12.79□□□□□ -0.36
CLN5-201ENST00000377453 RPL37AP61513 92 aaKnown RBP12.79□□□□□ -0.36
CLN5-201ENST00000377453 PSCAO43653 123 aa12.78□□□□□ -0.36
CLN5-201ENST00000377453 PHF5AQ7RTV0 110 aaKnown RBP12.78□□□□□ -0.36
CLN5-201ENST00000377453 A0A087WSZ3 146 aa12.78□□□□□ -0.36
CLN5-201ENST00000377453 SMIM26A0A096LP01 95 aa12.77□□□□□ -0.36
CLN5-201ENST00000377453 LINC00336Q6ZUF6 198 aa12.77□□□□□ -0.36
CLN5-201ENST00000377453 MPLKIPQ8TAP9 179 aa12.77□□□□□ -0.36
CLN5-201ENST00000377453 WFDC13Q8IUB5 93 aa12.76□□□□□ -0.37
CLN5-201ENST00000377453 DNAH7Q8WXX0 4024 aa12.76□□□□□ -0.37
CLN5-201ENST00000377453 LRCOL1A6NCL2 159 aa12.74□□□□□ -0.37
CLN5-201ENST00000377453 C16orf90A8MZG2 172 aa12.74□□□□□ -0.37
CLN5-201ENST00000377453 PRR4Q16378 134 aa12.74□□□□□ -0.37
CLN5-201ENST00000377453 A0A1B0GW54 56 aa12.71□□□□□ -0.38
CLN5-201ENST00000377453 HCG22E2RYF7 251 aa12.7□□□□□ -0.38
CLN5-201ENST00000377453 ATP5EP56381 51 aaPredicted RBP12.7□□□□□ -0.38
CLN5-201ENST00000377453 UBE2DNLQ8IWF7 75 aa12.7□□□□□ -0.38
CLN5-201ENST00000377453 UBE2AP49459 152 aa12.7□□□□□ -0.38
CLN5-201ENST00000377453 LCE6AA0A183 80 aa12.66□□□□□ -0.38
CLN5-201ENST00000377453 PANO1I0J062 215 aa12.66□□□□□ -0.38
CLN5-201ENST00000377453 CNBPP62633 177 aaKnown RBP12.65□□□□□ -0.38
CLN5-201ENST00000377453 ZCCHC13Q8WW36 166 aaKnown RBP12.63□□□□□ -0.39
CLN5-201ENST00000377453 DNHD1Q96M86 4753 aa12.6□□□□□ -0.39
CLN5-201ENST00000377453 APLNQ9ULZ1 77 aa12.59□□□□□ -0.39
CLN5-201ENST00000377453 C1orf64Q8NEQ6 169 aa12.58□□□□□ -0.39
CLN5-201ENST00000377453 PLECQ15149 4684 aaKnown RBP12.58□□□□□ -0.39
CLN5-201ENST00000377453 IGLV8-61A0A075B6I0 122 aa12.58□□□□□ -0.4
CLN5-201ENST00000377453 hDV103S1A0JD37 113 aa12.56□□□□□ -0.4
CLN5-201ENST00000377453 BRK1Q8WUW1 75 aa12.54□□□□□ -0.4
CLN5-201ENST00000377453 LINC00208Q96KT6 92 aa12.53□□□□□ -0.4
CLN5-201ENST00000377453 PRKDCP78527 4128 aaKnown RBP12.51□□□□□ -0.41
CLN5-201ENST00000377453 KRTAP29-1A8MX34 341 aaPredicted RBP12.51□□□□□ -0.41
CLN5-201ENST00000377453 C9orf163Q8N9P6 203 aa12.5□□□□□ -0.41
CLN5-201ENST00000377453 PRO0628Q9UI54 55 aa12.5□□□□□ -0.41
CLN5-201ENST00000377453 CASC2Q6XLA1 102 aa12.49□□□□□ -0.41
CLN5-201ENST00000377453 IGLV9-49A0A0B4J1Y8 123 aa12.48□□□□□ -0.41
CLN5-201ENST00000377453 PRR15Q8IV56 129 aa12.47□□□□□ -0.41
CLN5-201ENST00000377453 LINC00472Q9H8W2 130 aa12.47□□□□□ -0.41
CLN5-201ENST00000377453 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.47□□□□□ -0.41
CLN5-201ENST00000377453 H0Y9J4 135 aa12.46□□□□□ -0.41
CLN5-201ENST00000377453 SPRR1BP22528 89 aa12.45□□□□□ -0.42
CLN5-201ENST00000377453 C14orf177Q52M58 125 aa12.45□□□□□ -0.42
CLN5-201ENST00000377453 B9D2Q9BPU9 175 aa12.44□□□□□ -0.42
CLN5-201ENST00000377453 PKIGQ9Y2B9 76 aa12.44□□□□□ -0.42
CLN5-201ENST00000377453 MEGF8Q7Z7M0 2845 aa12.44□□□□□ -0.42
CLN5-201ENST00000377453 H0Y9P7 68 aa12.44□□□□□ -0.42
CLN5-201ENST00000377453 NBDYA0A0U1RRE5 68 aa12.43□□□□□ -0.42
CLN5-201ENST00000377453 MP68P56378 58 aa12.43□□□□□ -0.42
CLN5-201ENST00000377453 TRAV22A0A0B4J277 110 aa12.42□□□□□ -0.42
CLN5-201ENST00000377453 A8MWP4 228 aa12.42□□□□□ -0.42
CLN5-201ENST00000377453 DYNC2H1Q8NCM8 4307 aaKnown RBP12.41□□□□□ -0.42
CLN5-201ENST00000377453 ANAPC11Q9NYG5 84 aa12.41□□□□□ -0.42
CLN5-201ENST00000377453 PSPHP1O15172 72 aa12.41□□□□□ -0.42
CLN5-201ENST00000377453 Q6ZRN7 208 aaPredicted RBP12.41□□□□□ -0.42
CLN5-201ENST00000377453 STARD9Q9P2P6 4700 aa12.39□□□□□ -0.43
CLN5-201ENST00000377453 KRTAP13-1Q8IUC0 172 aa12.39□□□□□ -0.43
CLN5-201ENST00000377453 FRAS1Q86XX4 4008 aa12.39□□□□□ -0.43
CLN5-201ENST00000377453 MMP24-AS1A0A0U1RRL7 71 aa12.36□□□□□ -0.43
CLN5-201ENST00000377453 CYP4F30PQ9H0H9 118 aa12.35□□□□□ -0.43
CLN5-201ENST00000377453 SPACA4Q8TDM5 124 aa12.32□□□□□ -0.44
CLN5-201ENST00000377453 Q96NJ1 140 aa12.31□□□□□ -0.44
CLN5-201ENST00000377453 NDUFB1O75438 58 aa12.3□□□□□ -0.44
CLN5-201ENST00000377453 MOBPQ13875 183 aa12.3□□□□□ -0.44
CLN5-201ENST00000377453 TGP01266 2768 aa12.3□□□□□ -0.44
CLN5-201ENST00000377453 KMT2AQ03164 3969 aa12.29□□□□□ -0.44
CLN5-201ENST00000377453 Q1T7F1 81 aa12.28□□□□□ -0.44
CLN5-201ENST00000377453 PCOTHQ58A44 107 aa12.27□□□□□ -0.44
CLN5-201ENST00000377453 DNAH8Q96JB1 4490 aa12.27□□□□□ -0.45
CLN5-201ENST00000377453 HECTD4Q9Y4D8 3996 aa12.25□□□□□ -0.45
CLN5-201ENST00000377453 A8MUN3 132 aa12.25□□□□□ -0.45
CLN5-201ENST00000377453 PSORS1C2Q9UIG4 136 aa12.24□□□□□ -0.45
CLN5-201ENST00000377453 IGHV6-1A0A0B4J1U7 121 aa12.24□□□□□ -0.45
CLN5-201ENST00000377453 A0A087WTM6 91 aa12.24□□□□□ -0.45
CLN5-201ENST00000377453 VPS13DQ5THJ4 4388 aa12.23□□□□□ -0.45
CLN5-201ENST00000377453 A0A087X002 238 aa12.23□□□□□ -0.45
CLN5-201ENST00000377453 NOTCH2NLQ7Z3S9 236 aa12.23□□□□□ -0.45
CLN5-201ENST00000377453 A8MU10 97 aa12.22□□□□□ -0.45
CLN5-201ENST00000377453 DNAH2Q9P225 4427 aa12.22□□□□□ -0.45
CLN5-201ENST00000377453 NUPR2A6NF83 97 aa12.21□□□□□ -0.46
CLN5-201ENST00000377453 NDUFS5O43920 106 aa12.2□□□□□ -0.46
CLN5-201ENST00000377453 RTL8CO15255 209 aa12.2□□□□□ -0.46
CLN5-201ENST00000377453 WWC2-AS2Q96NR7 200 aa12.2□□□□□ -0.46
CLN5-201ENST00000377453 C8orf17Q9NRJ1 99 aa12.19□□□□□ -0.46
CLN5-201ENST00000377453 FBN3Q75N90 2809 aa12.16□□□□□ -0.46
CLN5-201ENST00000377453 DNAH17Q9UFH2 4485 aa12.16□□□□□ -0.46
CLN5-201ENST00000377453 CD164Q04900 197 aa12.15□□□□□ -0.46
CLN5-201ENST00000377453 LINC00483Q53H64 154 aa12.15□□□□□ -0.46
CLN5-201ENST00000377453 IGLV5-52A0A0A0MRZ9 124 aa12.15□□□□□ -0.46
CLN5-201ENST00000377453 H3BPC8 53 aa12.15□□□□□ -0.46
CLN5-201ENST00000377453 SPANXA2-OT1Q8N9U9 137 aa12.15□□□□□ -0.46
CLN5-201ENST00000377453 SPINK6Q6UWN8 80 aa12.13□□□□□ -0.47
CLN5-201ENST00000377453 Q5VV11 94 aa12.11□□□□□ -0.47
CLN5-201ENST00000377453 COA5Q86WW8 74 aa12.11□□□□□ -0.47
CLN5-201ENST00000377453 A0A1B0GVX0 72 aa12.1□□□□□ -0.47
CLN5-201ENST00000377453 ASB16-AS1Q495Z4 193 aa12.1□□□□□ -0.47
CLN5-201ENST00000377453 Q8N9P0 234 aaPredicted RBP12.1□□□□□ -0.47
CLN5-201ENST00000377453 C1orf195Q5TG92 126 aa12.09□□□□□ -0.47
CLN5-201ENST00000377453 ZNF861PO60384 105 aa12.07□□□□□ -0.48
CLN5-201ENST00000377453 PRR15LQ9BU68 103 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms