RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 UBE2DNLQ8IWF7 75 aa15.88■□□□□ 0.13
C9orf40-201ENST00000376854 DNAH7Q8WXX0 4024 aa15.88■□□□□ 0.13
C9orf40-201ENST00000376854 CSMD3Q7Z407 3707 aa15.87■□□□□ 0.13
C9orf40-201ENST00000376854 IGLV8-61A0A075B6I0 122 aa15.85■□□□□ 0.13
C9orf40-201ENST00000376854 LCE6AA0A183 80 aa15.85■□□□□ 0.13
C9orf40-201ENST00000376854 PLECQ15149 4684 aaKnown RBP15.84■□□□□ 0.13
C9orf40-201ENST00000376854 FP248Q71RG6 208 aaPredicted RBP15.84■□□□□ 0.13
C9orf40-201ENST00000376854 CHTF8P0CG12 524 aa15.83■□□□□ 0.12
C9orf40-201ENST00000376854 APLNQ9ULZ1 77 aa15.83■□□□□ 0.12
C9orf40-201ENST00000376854 HCG22E2RYF7 251 aa15.82■□□□□ 0.12
C9orf40-201ENST00000376854 PHF5AQ7RTV0 110 aaKnown RBP15.82■□□□□ 0.12
C9orf40-201ENST00000376854 A0A087WSZ3 146 aa15.82■□□□□ 0.12
C9orf40-201ENST00000376854 UBE2AP49459 152 aa15.82■□□□□ 0.12
C9orf40-201ENST00000376854 DEFB116Q30KQ4 102 aa15.82■□□□□ 0.12
C9orf40-201ENST00000376854 C14orf177Q52M58 125 aa15.82■□□□□ 0.12
C9orf40-201ENST00000376854 KRTAP11-1Q8IUC1 163 aa15.81■□□□□ 0.12
C9orf40-201ENST00000376854 MDFIQ99750 246 aa15.81■□□□□ 0.12
C9orf40-201ENST00000376854 LINC00474Q9P2X8 69 aa15.78■□□□□ 0.12
C9orf40-201ENST00000376854 H0Y9J4 135 aa15.73■□□□□ 0.11
C9orf40-201ENST00000376854 ZCCHC13Q8WW36 166 aaKnown RBP15.72■□□□□ 0.11
C9orf40-201ENST00000376854 FAM229BQ4G0N7 80 aa15.71■□□□□ 0.11
C9orf40-201ENST00000376854 SPRR1BP22528 89 aa15.7■□□□□ 0.1
C9orf40-201ENST00000376854 C9orf163Q8N9P6 203 aa15.7■□□□□ 0.1
C9orf40-201ENST00000376854 WFDC13Q8IUB5 93 aa15.69■□□□□ 0.1
C9orf40-201ENST00000376854 B9D2Q9BPU9 175 aa15.69■□□□□ 0.1
C9orf40-201ENST00000376854 RPL37AP61513 92 aaKnown RBP15.68■□□□□ 0.1
C9orf40-201ENST00000376854 LRCOL1A6NCL2 159 aa15.66■□□□□ 0.1
C9orf40-201ENST00000376854 SRRM2Q9UQ35 2752 aaKnown RBP15.63■□□□□ 0.09
C9orf40-201ENST00000376854 PKIGQ9Y2B9 76 aa15.62■□□□□ 0.09
C9orf40-201ENST00000376854 STARD9Q9P2P6 4700 aa15.61■□□□□ 0.09
C9orf40-201ENST00000376854 NBDYA0A0U1RRE5 68 aa15.61■□□□□ 0.09
C9orf40-201ENST00000376854 LINC00336Q6ZUF6 198 aa15.61■□□□□ 0.09
C9orf40-201ENST00000376854 PANO1I0J062 215 aa15.59■□□□□ 0.09
C9orf40-201ENST00000376854 MPLKIPQ8TAP9 179 aa15.59■□□□□ 0.09
C9orf40-201ENST00000376854 KRTAP29-1A8MX34 341 aaPredicted RBP15.57■□□□□ 0.08
C9orf40-201ENST00000376854 PRKDCP78527 4128 aaKnown RBP15.57■□□□□ 0.08
C9orf40-201ENST00000376854 PRR15Q8IV56 129 aa15.56■□□□□ 0.08
C9orf40-201ENST00000376854 LINC00472Q9H8W2 130 aa15.56■□□□□ 0.08
C9orf40-201ENST00000376854 VPS13DQ5THJ4 4388 aa15.55■□□□□ 0.08
C9orf40-201ENST00000376854 hDV103S1A0JD37 113 aa15.55■□□□□ 0.08
C9orf40-201ENST00000376854 Q6ZRN7 208 aaPredicted RBP15.55■□□□□ 0.08
C9orf40-201ENST00000376854 A8MWP4 228 aa15.54■□□□□ 0.08
C9orf40-201ENST00000376854 MP68P56378 58 aa15.54■□□□□ 0.08
C9orf40-201ENST00000376854 CASC2Q6XLA1 102 aa15.54■□□□□ 0.08
C9orf40-201ENST00000376854 KRTAP13-1Q8IUC0 172 aa15.53■□□□□ 0.08
C9orf40-201ENST00000376854 C1orf64Q8NEQ6 169 aa15.52■□□□□ 0.07
C9orf40-201ENST00000376854 NUPR2A6NF83 97 aa15.49■□□□□ 0.07
C9orf40-201ENST00000376854 NDUFB1O75438 58 aa15.49■□□□□ 0.07
C9orf40-201ENST00000376854 PRO0628Q9UI54 55 aa15.47■□□□□ 0.07
C9orf40-201ENST00000376854 PRR4Q16378 134 aa15.46■□□□□ 0.07
C9orf40-201ENST00000376854 LINC00208Q96KT6 92 aa15.46■□□□□ 0.07
C9orf40-201ENST00000376854 TRAV22A0A0B4J277 110 aa15.45■□□□□ 0.06
C9orf40-201ENST00000376854 CYP4F30PQ9H0H9 118 aa15.45■□□□□ 0.06
C9orf40-201ENST00000376854 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP15.45■□□□□ 0.06
C9orf40-201ENST00000376854 SPACA4Q8TDM5 124 aa15.45■□□□□ 0.06
C9orf40-201ENST00000376854 H0Y9P7 68 aa15.43■□□□□ 0.06
C9orf40-201ENST00000376854 MEGF8Q7Z7M0 2845 aa15.42■□□□□ 0.06
C9orf40-201ENST00000376854 IGLV9-49A0A0B4J1Y8 123 aa15.4■□□□□ 0.06
C9orf40-201ENST00000376854 DNAH2Q9P225 4427 aa15.39■□□□□ 0.05
C9orf40-201ENST00000376854 H3BPC8 53 aa15.37■□□□□ 0.05
C9orf40-201ENST00000376854 HECTD4Q9Y4D8 3996 aa15.37■□□□□ 0.05
C9orf40-201ENST00000376854 MMP24-AS1A0A0U1RRL7 71 aa15.36■□□□□ 0.05
C9orf40-201ENST00000376854 DNHD1Q96M86 4753 aa15.35■□□□□ 0.05
C9orf40-201ENST00000376854 KMT2AQ03164 3969 aa15.35■□□□□ 0.05
C9orf40-201ENST00000376854 BRK1Q8WUW1 75 aa15.34■□□□□ 0.05
C9orf40-201ENST00000376854 A0A087WTM6 91 aa15.33■□□□□ 0.05
C9orf40-201ENST00000376854 LINC00483Q53H64 154 aa15.32■□□□□ 0.04
C9orf40-201ENST00000376854 KRTAP21-3Q3LHN1 58 aa15.31■□□□□ 0.04
C9orf40-201ENST00000376854 Q96NJ1 140 aa15.31■□□□□ 0.04
C9orf40-201ENST00000376854 Q1T7F1 81 aa15.31■□□□□ 0.04
C9orf40-201ENST00000376854 SPANXA2-OT1Q8N9U9 137 aa15.28■□□□□ 0.04
C9orf40-201ENST00000376854 DNAH17Q9UFH2 4485 aa15.28■□□□□ 0.04
C9orf40-201ENST00000376854 ZNF706Q9Y5V0 76 aaPredicted RBP15.26■□□□□ 0.03
C9orf40-201ENST00000376854 RTL8CO15255 209 aa15.25■□□□□ 0.03
C9orf40-201ENST00000376854 PSORS1C2Q9UIG4 136 aa15.25■□□□□ 0.03
C9orf40-201ENST00000376854 MOBPQ13875 183 aa15.23■□□□□ 0.03
C9orf40-201ENST00000376854 IGLV5-52A0A0A0MRZ9 124 aa15.23■□□□□ 0.03
C9orf40-201ENST00000376854 WWC2-AS2Q96NR7 200 aa15.22■□□□□ 0.03
C9orf40-201ENST00000376854 ASB16-AS1Q495Z4 193 aa15.2■□□□□ 0.02
C9orf40-201ENST00000376854 FBN3Q75N90 2809 aa15.19■□□□□ 0.02
C9orf40-201ENST00000376854 DNAH8Q96JB1 4490 aa15.19■□□□□ 0.02
C9orf40-201ENST00000376854 C8orf17Q9NRJ1 99 aa15.18■□□□□ 0.02
C9orf40-201ENST00000376854 ANAPC11Q9NYG5 84 aa15.18■□□□□ 0.02
C9orf40-201ENST00000376854 TGP01266 2768 aa15.17■□□□□ 0.02
C9orf40-201ENST00000376854 PLAC8Q9NZF1 115 aa15.16■□□□□ 0.02
C9orf40-201ENST00000376854 Q6ZR54 194 aa15.16■□□□□ 0.02
C9orf40-201ENST00000376854 ZNF861PO60384 105 aa15.15■□□□□ 0.02
C9orf40-201ENST00000376854 TP53AIP1Q9HCN2 124 aa15.15■□□□□ 0.02
C9orf40-201ENST00000376854 PSPHP1O15172 72 aa15.15■□□□□ 0.02
C9orf40-201ENST00000376854 FRAS1Q86XX4 4008 aa15.15■□□□□ 0.02
C9orf40-201ENST00000376854 IGHV6-1A0A0B4J1U7 121 aa15.14■□□□□ 0.01
C9orf40-201ENST00000376854 A0A1B0GVX0 72 aa15.12■□□□□ 0.01
C9orf40-201ENST00000376854 CDK2AP2O75956 126 aa15.1■□□□□ 0.01
C9orf40-201ENST00000376854 V9GYY9 64 aa15.09■□□□□ 0.01
C9orf40-201ENST00000376854 IGLV7-46A0A075B6I9 117 aa15.06■□□□□ 0
C9orf40-201ENST00000376854 NDUFS5O43920 106 aa15.06■□□□□ 0
C9orf40-201ENST00000376854 PCOTHQ58A44 107 aa15.05■□□□□ -0
C9orf40-201ENST00000376854 A8MUN3 132 aa15.01□□□□□ -0.01
C9orf40-201ENST00000376854 MRPL34Q9BQ48 92 aaKnown RBP15.01□□□□□ -0.01
C9orf40-201ENST00000376854 A0A087X002 238 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms