RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 SPRR1BP22528 89 aa11.13□□□□□ -0.63
HLA-DQB1-201ENST00000374943 C1orf137Q5JT78 98 aa11.13□□□□□ -0.63
HLA-DQB1-201ENST00000374943 ANAPC13Q9BS18 74 aa11.13□□□□□ -0.63
HLA-DQB1-201ENST00000374943 FAM236AA0A1B0GUQ0 79 aa11.12□□□□□ -0.63
HLA-DQB1-201ENST00000374943 FAM236BA0A1B0GV22 79 aa11.12□□□□□ -0.63
HLA-DQB1-201ENST00000374943 DNAH8Q96JB1 4490 aa11.11□□□□□ -0.63
HLA-DQB1-201ENST00000374943 IGLV8-61A0A075B6I0 122 aa11.11□□□□□ -0.63
HLA-DQB1-201ENST00000374943 F8WEM9 126 aa11.11□□□□□ -0.63
HLA-DQB1-201ENST00000374943 HIST1H4AP62805 103 aaKnown RBP11.11□□□□□ -0.63
HLA-DQB1-201ENST00000374943 DNAH5Q8TE73 4624 aa11.1□□□□□ -0.63
HLA-DQB1-201ENST00000374943 A0A1W2PNM2 257 aa11.09□□□□□ -0.63
HLA-DQB1-201ENST00000374943 CXCL6P80162 114 aa11.09□□□□□ -0.63
HLA-DQB1-201ENST00000374943 Q8NBF4 154 aa11.09□□□□□ -0.63
HLA-DQB1-201ENST00000374943 HYDINQ4G0P3 5121 aa11.07□□□□□ -0.64
HLA-DQB1-201ENST00000374943 SPRR4Q96PI1 79 aa11.07□□□□□ -0.64
HLA-DQB1-201ENST00000374943 HAMPP81172 84 aa11.05□□□□□ -0.64
HLA-DQB1-201ENST00000374943 KRTAP10-2P60368 255 aa11.04□□□□□ -0.64
HLA-DQB1-201ENST00000374943 FAT2Q9NYQ8 4349 aa11.04□□□□□ -0.64
HLA-DQB1-201ENST00000374943 PSORS1C2Q9UIG4 136 aa11.04□□□□□ -0.64
HLA-DQB1-201ENST00000374943 PKD1P98161 4303 aa11.03□□□□□ -0.64
HLA-DQB1-201ENST00000374943 A0A087WVE0 104 aa11.03□□□□□ -0.64
HLA-DQB1-201ENST00000374943 IGFL1Q6UW32 110 aa11.02□□□□□ -0.64
HLA-DQB1-201ENST00000374943 CRYGAP11844 174 aa11.01□□□□□ -0.65
HLA-DQB1-201ENST00000374943 NREPQ16612 68 aa11.01□□□□□ -0.65
HLA-DQB1-201ENST00000374943 SRRM2Q9UQ35 2752 aaKnown RBP11□□□□□ -0.65
HLA-DQB1-201ENST00000374943 ATOX1O00244 68 aa11□□□□□ -0.65
HLA-DQB1-201ENST00000374943 Q6ZSA8 131 aa10.98□□□□□ -0.65
HLA-DQB1-201ENST00000374943 LINC00483Q53H64 154 aa10.97□□□□□ -0.65
HLA-DQB1-201ENST00000374943 ZNF706Q9Y5V0 76 aaPredicted RBP10.97□□□□□ -0.65
HLA-DQB1-201ENST00000374943 ZNF861PO60384 105 aa10.96□□□□□ -0.65
HLA-DQB1-201ENST00000374943 FAM30AQ9NZY2 134 aa10.95□□□□□ -0.66
HLA-DQB1-201ENST00000374943 SCXQ7RTU7 201 aa10.94□□□□□ -0.66
HLA-DQB1-201ENST00000374943 CIRBP-AS1Q8TBR5 109 aa10.94□□□□□ -0.66
HLA-DQB1-201ENST00000374943 BPY2O14599 106 aa10.93□□□□□ -0.66
HLA-DQB1-201ENST00000374943 KRTAP17-1Q9BYP8 105 aa10.92□□□□□ -0.66
HLA-DQB1-201ENST00000374943 A0A0G2JQZ4 141 aa10.92□□□□□ -0.66
HLA-DQB1-201ENST00000374943 KRTAP10-1P60331 282 aa10.92□□□□□ -0.66
HLA-DQB1-201ENST00000374943 CCDC179H3BU77 68 aa10.9□□□□□ -0.66
HLA-DQB1-201ENST00000374943 IGLV7-43P04211 117 aa10.9□□□□□ -0.66
HLA-DQB1-201ENST00000374943 RPL37AP61513 92 aaKnown RBP10.89□□□□□ -0.67
HLA-DQB1-201ENST00000374943 IGKV4-1P06312 121 aa10.88□□□□□ -0.67
HLA-DQB1-201ENST00000374943 UQCRQO14949 82 aa10.86□□□□□ -0.67
HLA-DQB1-201ENST00000374943 COX7CP15954 63 aa10.86□□□□□ -0.67
HLA-DQB1-201ENST00000374943 A0A087WSZ3 146 aa10.85□□□□□ -0.67
HLA-DQB1-201ENST00000374943 SERP2Q8N6R1 65 aa10.85□□□□□ -0.67
HLA-DQB1-201ENST00000374943 LINC00336Q6ZUF6 198 aa10.84□□□□□ -0.67
HLA-DQB1-201ENST00000374943 Q8N9L7 120 aa10.83□□□□□ -0.68
HLA-DQB1-201ENST00000374943 IGLV9-49A0A0B4J1Y8 123 aa10.82□□□□□ -0.68
HLA-DQB1-201ENST00000374943 C9orf153Q5TBE3 101 aa10.82□□□□□ -0.68
HLA-DQB1-201ENST00000374943 DSCR10P59022 87 aa10.81□□□□□ -0.68
HLA-DQB1-201ENST00000374943 SMIM20Q8N5G0 67 aa10.8□□□□□ -0.68
HLA-DQB1-201ENST00000374943 LRP1BQ9NZR2 4599 aa10.77□□□□□ -0.68
HLA-DQB1-201ENST00000374943 TRAV7A0A075B6U4 112 aa10.76□□□□□ -0.69
HLA-DQB1-201ENST00000374943 MOBPQ13875 183 aa10.76□□□□□ -0.69
HLA-DQB1-201ENST00000374943 LINC00472Q9H8W2 130 aa10.74□□□□□ -0.69
HLA-DQB1-201ENST00000374943 ANAPC11Q9NYG5 84 aa10.74□□□□□ -0.69
HLA-DQB1-201ENST00000374943 K7EQZ3 153 aa10.73□□□□□ -0.69
HLA-DQB1-201ENST00000374943 A0A1B0GVY2 172 aa10.71□□□□□ -0.69
HLA-DQB1-201ENST00000374943 PKHD1P08F94 4074 aa10.71□□□□□ -0.7
HLA-DQB1-201ENST00000374943 HERC2O95714 4834 aa10.7□□□□□ -0.7
HLA-DQB1-201ENST00000374943 DEFB116Q30KQ4 102 aa10.69□□□□□ -0.7
HLA-DQB1-201ENST00000374943 SS18L2Q9UHA2 77 aa10.69□□□□□ -0.7
HLA-DQB1-201ENST00000374943 J3KT08 172 aa10.68□□□□□ -0.7
HLA-DQB1-201ENST00000374943 DYNC1H1Q14204 4646 aaKnown RBP10.67□□□□□ -0.7
HLA-DQB1-201ENST00000374943 VPS13BQ7Z7G8 4022 aa10.66□□□□□ -0.7
HLA-DQB1-201ENST00000374943 SSBP3-AS1Q7Z2R9 100 aa10.66□□□□□ -0.7
HLA-DQB1-201ENST00000374943 A8MWP4 228 aa10.65□□□□□ -0.7
HLA-DQB1-201ENST00000374943 HCG22E2RYF7 251 aa10.65□□□□□ -0.7
HLA-DQB1-201ENST00000374943 FAM229BQ4G0N7 80 aa10.65□□□□□ -0.7
HLA-DQB1-201ENST00000374943 Q96NJ1 140 aa10.65□□□□□ -0.7
HLA-DQB1-201ENST00000374943 OCR1Q9BZK8 76 aa10.65□□□□□ -0.7
HLA-DQB1-201ENST00000374943 CD164Q04900 197 aa10.64□□□□□ -0.71
HLA-DQB1-201ENST00000374943 HRCT1Q6UXD1 115 aa10.63□□□□□ -0.71
HLA-DQB1-201ENST00000374943 PRR15Q8IV56 129 aa10.63□□□□□ -0.71
HLA-DQB1-201ENST00000374943 C20orf197Q8N268 126 aa10.59□□□□□ -0.71
HLA-DQB1-201ENST00000374943 CYSTM1Q9H1C7 97 aa10.59□□□□□ -0.71
HLA-DQB1-201ENST00000374943 KRTAP1-4P0C5Y4 121 aa10.58□□□□□ -0.72
HLA-DQB1-201ENST00000374943 A0A087X002 238 aa10.57□□□□□ -0.72
HLA-DQB1-201ENST00000374943 KRTAP13-2Q52LG2 175 aa10.57□□□□□ -0.72
HLA-DQB1-201ENST00000374943 KRTAP29-1A8MX34 341 aaPredicted RBP10.57□□□□□ -0.72
HLA-DQB1-201ENST00000374943 KLKP1Q107X0 134 aa10.57□□□□□ -0.72
HLA-DQB1-201ENST00000374943 APOBP04114 4563 aaKnown RBP10.56□□□□□ -0.72
HLA-DQB1-201ENST00000374943 NDUFB1O75438 58 aa10.55□□□□□ -0.72
HLA-DQB1-201ENST00000374943 PCLOQ9Y6V0 5065 aa10.55□□□□□ -0.72
HLA-DQB1-201ENST00000374943 ASB16-AS1Q495Z4 193 aa10.53□□□□□ -0.72
HLA-DQB1-201ENST00000374943 SPINK6Q6UWN8 80 aa10.53□□□□□ -0.72
HLA-DQB1-201ENST00000374943 WFDC13Q8IUB5 93 aa10.53□□□□□ -0.72
HLA-DQB1-201ENST00000374943 KIAA1109Q2LD37 5005 aa10.51□□□□□ -0.73
HLA-DQB1-201ENST00000374943 CASC2Q6XLA1 102 aa10.51□□□□□ -0.73
HLA-DQB1-201ENST00000374943 MMP24-AS1A0A0U1RRL7 71 aa10.5□□□□□ -0.73
HLA-DQB1-201ENST00000374943 TMEM258P61165 79 aa10.5□□□□□ -0.73
HLA-DQB1-201ENST00000374943 TMEM254Q8TBM7 123 aa10.5□□□□□ -0.73
HLA-DQB1-201ENST00000374943 Q5XG85 94 aa10.49□□□□□ -0.73
HLA-DQB1-201ENST00000374943 A0A1B0GVX0 72 aa10.47□□□□□ -0.73
HLA-DQB1-201ENST00000374943 A0A0U1RQV1 116 aa10.47□□□□□ -0.73
HLA-DQB1-201ENST00000374943 SNURFQ9Y675 71 aa10.47□□□□□ -0.73
HLA-DQB1-201ENST00000374943 CDK2AP2O75956 126 aa10.46□□□□□ -0.74
HLA-DQB1-201ENST00000374943 H7BZZ5 65 aa10.45□□□□□ -0.74
HLA-DQB1-201ENST00000374943 NDUFC1O43677 76 aa10.45□□□□□ -0.74
HLA-DQB1-201ENST00000374943 PLA2G1BP04054 148 aaKnown RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms