RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 RPL37AP61513 92 aaKnown RBP13.12□□□□□ -0.31
TMEFF1-201ENST00000374879 LINC00476Q8WZB0 136 aa13.11□□□□□ -0.31
TMEFF1-201ENST00000374879 LOC101927531A0A1B0GV80 90 aa13.1□□□□□ -0.31
TMEFF1-201ENST00000374879 FAM168BA1KXE4 195 aa13.09□□□□□ -0.31
TMEFF1-201ENST00000374879 KRTAP29-1A8MX34 341 aaPredicted RBP13.09□□□□□ -0.31
TMEFF1-201ENST00000374879 IGLV1-50A0A075B6I6 118 aa13.08□□□□□ -0.32
TMEFF1-201ENST00000374879 TEP1Q99973 2627 aaKnown RBP13.08□□□□□ -0.32
TMEFF1-201ENST00000374879 HIVEP1P15822 2718 aa13.08□□□□□ -0.32
TMEFF1-201ENST00000374879 SPRR1AP35321 89 aa13.07□□□□□ -0.32
TMEFF1-201ENST00000374879 COA5Q86WW8 74 aa13.07□□□□□ -0.32
TMEFF1-201ENST00000374879 C9orf163Q8N9P6 203 aa13.06□□□□□ -0.32
TMEFF1-201ENST00000374879 IGFL1Q6UW32 110 aa13.05□□□□□ -0.32
TMEFF1-201ENST00000374879 CDC42SE1Q9NRR8 79 aa13.05□□□□□ -0.32
TMEFF1-201ENST00000374879 H3BPC8 53 aa13.04□□□□□ -0.32
TMEFF1-201ENST00000374879 A0A087WSZ3 146 aa13.04□□□□□ -0.32
TMEFF1-201ENST00000374879 CASC2Q6XLA1 102 aa13.02□□□□□ -0.32
TMEFF1-201ENST00000374879 C7orf65Q6ZTY9 151 aa13.01□□□□□ -0.33
TMEFF1-201ENST00000374879 MOBPQ13875 183 aa13□□□□□ -0.33
TMEFF1-201ENST00000374879 PKD1L1Q8TDX9 2849 aa13□□□□□ -0.33
TMEFF1-201ENST00000374879 KRTAP7-1Q8IUC3 87 aa12.99□□□□□ -0.33
TMEFF1-201ENST00000374879 F8P00451 2351 aa12.98□□□□□ -0.33
TMEFF1-201ENST00000374879 CNBPP62633 177 aaKnown RBP12.97□□□□□ -0.33
TMEFF1-201ENST00000374879 PLA2G2DQ9UNK4 145 aa12.97□□□□□ -0.33
TMEFF1-201ENST00000374879 OXLD1Q5BKU9 147 aa12.97□□□□□ -0.33
TMEFF1-201ENST00000374879 C11orf45Q8TAV5 145 aa12.96□□□□□ -0.33
TMEFF1-201ENST00000374879 ANK2Q01484 3957 aa12.96□□□□□ -0.34
TMEFF1-201ENST00000374879 IGLV7-46A0A075B6I9 117 aa12.94□□□□□ -0.34
TMEFF1-201ENST00000374879 SPAG11AQ6PDA7 123 aa12.94□□□□□ -0.34
TMEFF1-201ENST00000374879 IGLV5-37A0A075B6J1 123 aa12.92□□□□□ -0.34
TMEFF1-201ENST00000374879 H3BNG1 76 aa12.92□□□□□ -0.34
TMEFF1-201ENST00000374879 TLX1NBP0CAT3 122 aa12.92□□□□□ -0.34
TMEFF1-201ENST00000374879 FLNBO75369 2602 aaKnown RBP12.91□□□□□ -0.34
TMEFF1-201ENST00000374879 KRTAP10-11P60412 298 aa12.91□□□□□ -0.34
TMEFF1-201ENST00000374879 LINC01558Q9Y6Z2 57 aa12.91□□□□□ -0.34
TMEFF1-201ENST00000374879 PCOTHQ58A44 107 aa12.89□□□□□ -0.35
TMEFF1-201ENST00000374879 SPINK7P58062 85 aa12.89□□□□□ -0.35
TMEFF1-201ENST00000374879 PLAC8Q9NZF1 115 aa12.89□□□□□ -0.35
TMEFF1-201ENST00000374879 REG3GQ6UW15 175 aa12.86□□□□□ -0.35
TMEFF1-201ENST00000374879 A8MWP4 228 aa12.85□□□□□ -0.35
TMEFF1-201ENST00000374879 IGLV8-61A0A075B6I0 122 aa12.83□□□□□ -0.36
TMEFF1-201ENST00000374879 C8orf87E5RJ46 101 aa12.83□□□□□ -0.36
TMEFF1-201ENST00000374879 C4orf48Q5BLP8 95 aa12.82□□□□□ -0.36
TMEFF1-201ENST00000374879 STAB1Q9NY15 2570 aa12.82□□□□□ -0.36
TMEFF1-201ENST00000374879 PRLHP81277 87 aa12.81□□□□□ -0.36
TMEFF1-201ENST00000374879 FBN1P35555 2871 aaKnown RBP12.81□□□□□ -0.36
TMEFF1-201ENST00000374879 TENM3Q9P273 2699 aa12.8□□□□□ -0.36
TMEFF1-201ENST00000374879 DEFB131BA0A096LNP1 70 aa12.8□□□□□ -0.36
TMEFF1-201ENST00000374879 LINC01556Q5JQF7 62 aa12.8□□□□□ -0.36
TMEFF1-201ENST00000374879 LINC00472Q9H8W2 130 aa12.8□□□□□ -0.36
TMEFF1-201ENST00000374879 CASC10Q5T4H9 136 aa12.78□□□□□ -0.36
TMEFF1-201ENST00000374879 MMP24-AS1A0A0U1RRL7 71 aa12.76□□□□□ -0.37
TMEFF1-201ENST00000374879 H0Y9J4 135 aa12.76□□□□□ -0.37
TMEFF1-201ENST00000374879 NOTCH1P46531 2555 aa12.76□□□□□ -0.37
TMEFF1-201ENST00000374879 MAST4O15021 2626 aa12.75□□□□□ -0.37
TMEFF1-201ENST00000374879 LINC00313P59037 77 aa12.74□□□□□ -0.37
TMEFF1-201ENST00000374879 PRAC1Q96KF2 57 aa12.73□□□□□ -0.37
TMEFF1-201ENST00000374879 HRES1P13985 223 aa12.72□□□□□ -0.37
TMEFF1-201ENST00000374879 KRTAP24-1Q3LI83 254 aa12.7□□□□□ -0.38
TMEFF1-201ENST00000374879 DNAH10OSP0CZ25 163 aa12.69□□□□□ -0.38
TMEFF1-201ENST00000374879 SRRM2Q9UQ35 2752 aaKnown RBP12.68□□□□□ -0.38
TMEFF1-201ENST00000374879 BAHCC1Q9P281 2608 aa12.68□□□□□ -0.38
TMEFF1-201ENST00000374879 TENM2Q9NT68 2774 aa12.66□□□□□ -0.38
TMEFF1-201ENST00000374879 ADM2Q7Z4H4 148 aa12.64□□□□□ -0.39
TMEFF1-201ENST00000374879 IGKV2-24A0A0C4DH68 120 aa12.64□□□□□ -0.39
TMEFF1-201ENST00000374879 A0A096LNI7 61 aa12.63□□□□□ -0.39
TMEFF1-201ENST00000374879 CSMD3Q7Z407 3707 aa12.63□□□□□ -0.39
TMEFF1-201ENST00000374879 CMYA5Q8N3K9 4069 aa12.62□□□□□ -0.39
TMEFF1-201ENST00000374879 Q6ZR54 194 aa12.6□□□□□ -0.39
TMEFF1-201ENST00000374879 TP53AIP1Q9HCN2 124 aa12.6□□□□□ -0.39
TMEFF1-201ENST00000374879 PRR26Q8N8Z3 221 aa12.58□□□□□ -0.4
TMEFF1-201ENST00000374879 ASB16-AS1Q495Z4 193 aa12.58□□□□□ -0.4
TMEFF1-201ENST00000374879 DNAH1Q9P2D7 4330 aa12.55□□□□□ -0.4
TMEFF1-201ENST00000374879 COL6A5A8TX70 2615 aa12.55□□□□□ -0.4
TMEFF1-201ENST00000374879 NBEAL1Q6ZS30 2694 aa12.55□□□□□ -0.4
TMEFF1-201ENST00000374879 SPRR1BP22528 89 aa12.53□□□□□ -0.4
TMEFF1-201ENST00000374879 KRTAP11-1Q8IUC1 163 aa12.53□□□□□ -0.4
TMEFF1-201ENST00000374879 LINC01554Q52M75 96 aa12.52□□□□□ -0.41
TMEFF1-201ENST00000374879 PLA2G1BP04054 148 aaKnown RBP12.51□□□□□ -0.41
TMEFF1-201ENST00000374879 C8orf17Q9NRJ1 99 aa12.51□□□□□ -0.41
TMEFF1-201ENST00000374879 DNAH3Q8TD57 4116 aa12.51□□□□□ -0.41
TMEFF1-201ENST00000374879 Q96NJ1 140 aa12.51□□□□□ -0.41
TMEFF1-201ENST00000374879 H3BS24 57 aa12.49□□□□□ -0.41
TMEFF1-201ENST00000374879 LYSTQ99698 3801 aa12.48□□□□□ -0.41
TMEFF1-201ENST00000374879 IGHV6-1A0A0B4J1U7 121 aa12.44□□□□□ -0.42
TMEFF1-201ENST00000374879 K7EIL1 84 aa12.42□□□□□ -0.42
TMEFF1-201ENST00000374879 ALMS1Q8TCU4 4167 aa12.4□□□□□ -0.42
TMEFF1-201ENST00000374879 HUWE1Q7Z6Z7 4374 aaKnown RBP12.4□□□□□ -0.42
TMEFF1-201ENST00000374879 MDFIQ99750 246 aa12.39□□□□□ -0.43
TMEFF1-201ENST00000374879 MRPL34Q9BQ48 92 aaKnown RBP12.38□□□□□ -0.43
TMEFF1-201ENST00000374879 RTL8CO15255 209 aa12.38□□□□□ -0.43
TMEFF1-201ENST00000374879 MGAM2Q2M2H8 2515 aa12.37□□□□□ -0.43
TMEFF1-201ENST00000374879 A0A1B0GVX0 72 aa12.37□□□□□ -0.43
TMEFF1-201ENST00000374879 DNAH10Q8IVF4 4471 aa12.37□□□□□ -0.43
TMEFF1-201ENST00000374879 A0A087X002 238 aa12.36□□□□□ -0.43
TMEFF1-201ENST00000374879 CHTF8P0CG12 524 aa12.36□□□□□ -0.43
TMEFF1-201ENST00000374879 NOTCH2NLQ7Z3S9 236 aa12.36□□□□□ -0.43
TMEFF1-201ENST00000374879 IGLV9-49A0A0B4J1Y8 123 aa12.34□□□□□ -0.43
TMEFF1-201ENST00000374879 KRTAP1-5Q9BYS1 174 aa12.33□□□□□ -0.44
TMEFF1-201ENST00000374879 ACYP2P14621 99 aa12.31□□□□□ -0.44
TMEFF1-201ENST00000374879 Q5W150 140 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms