RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 DDTP30046 118 aa2.56□□□□□ -2
PMS1-202ENST00000374826 RPL28P46779 137 aaKnown RBP2.56□□□□□ -2
PMS1-202ENST00000374826 ARL17AQ8IVW1 177 aa2.56□□□□□ -2
PMS1-202ENST00000374826 DIRC1Q969H9 104 aa2.56□□□□□ -2
PMS1-202ENST00000374826 SPANXDQ9BXN6 97 aa2.56□□□□□ -2
PMS1-202ENST00000374826 SPANXCQ9NY87 97 aa2.56□□□□□ -2
PMS1-202ENST00000374826 TRBV10-2A0A0K0K1G8 114 aa2.55□□□□□ -2
PMS1-202ENST00000374826 KRTAP4-16G5E9R7 235 aaPredicted RBP2.55□□□□□ -2
PMS1-202ENST00000374826 NDUFC2O95298 119 aa2.55□□□□□ -2
PMS1-202ENST00000374826 JOSD1Q15040 202 aaPredicted RBP2.55□□□□□ -2
PMS1-202ENST00000374826 SPATA45Q537H7 98 aa2.55□□□□□ -2
PMS1-202ENST00000374826 S100A7L2Q5SY68 101 aa2.55□□□□□ -2
PMS1-202ENST00000374826 KRTAP13-1Q8IUC0 172 aa2.55□□□□□ -2
PMS1-202ENST00000374826 VAMP8Q9BV40 100 aa2.55□□□□□ -2
PMS1-202ENST00000374826 TRAV23DV6A0A075B6W5 121 aa2.54□□□□□ -2
PMS1-202ENST00000374826 ETDCA0A1B0GVM5 59 aa2.54□□□□□ -2
PMS1-202ENST00000374826 IGLV6-57P01721 117 aa2.54□□□□□ -2
PMS1-202ENST00000374826 COX8AP10176 69 aa2.54□□□□□ -2
PMS1-202ENST00000374826 SPRR1AP35321 89 aa2.54□□□□□ -2
PMS1-202ENST00000374826 PYY3Q5JQD4 70 aa2.54□□□□□ -2
PMS1-202ENST00000374826 MUSTN1Q8IVN3 82 aa2.54□□□□□ -2
PMS1-202ENST00000374826 LINC00337Q8N6G1 96 aa2.54□□□□□ -2
PMS1-202ENST00000374826 OR13C6PQ8NH95 151 aa2.54□□□□□ -2
PMS1-202ENST00000374826 C14orf144Q96I85 54 aa2.54□□□□□ -2
PMS1-202ENST00000374826 LINC01600Q96MT4 127 aa2.54□□□□□ -2
PMS1-202ENST00000374826 HIGD2AQ9BW72 106 aa2.54□□□□□ -2
PMS1-202ENST00000374826 KCNQ1DNQ9H478 68 aa2.54□□□□□ -2
PMS1-202ENST00000374826 HERC1Q15751 4861 aa2.53□□□□□ -2
PMS1-202ENST00000374826 IFITM1P13164 125 aa2.53□□□□□ -2
PMS1-202ENST00000374826 S100A12P80511 92 aa2.53□□□□□ -2
PMS1-202ENST00000374826 C12orf57Q99622 126 aa2.53□□□□□ -2
PMS1-202ENST00000374826 A6NDN8 102 aa2.52□□□□□ -2.01
PMS1-202ENST00000374826 ZNF73O43830 326 aaPredicted RBP2.52□□□□□ -2.01
PMS1-202ENST00000374826 ERC2-IT1O76042 136 aa2.52□□□□□ -2.01
PMS1-202ENST00000374826 SLC25A34Q6PIV7 304 aa2.52□□□□□ -2.01
PMS1-202ENST00000374826 Q6ZRX8 168 aa2.52□□□□□ -2.01
PMS1-202ENST00000374826 C2orf91Q6ZV80 131 aa2.52□□□□□ -2.01
PMS1-202ENST00000374826 SMCR5Q8TEV8 140 aa2.52□□□□□ -2.01
PMS1-202ENST00000374826 COPS9Q8WXC6 57 aa2.52□□□□□ -2.01
PMS1-202ENST00000374826 HIST1H4GQ99525 98 aa2.52□□□□□ -2.01
PMS1-202ENST00000374826 Q9BRP9 147 aa2.52□□□□□ -2.01
PMS1-202ENST00000374826 DLEU1O43261 78 aa2.51□□□□□ -2.01
PMS1-202ENST00000374826 RPL13AP40429 203 aaKnown RBP2.51□□□□□ -2.01
PMS1-202ENST00000374826 C6orf99Q4VX62 202 aa2.51□□□□□ -2.01
PMS1-202ENST00000374826 SPRR4Q96PI1 79 aa2.51□□□□□ -2.01
PMS1-202ENST00000374826 PPDPFQ9H3Y8 114 aa2.51□□□□□ -2.01
PMS1-202ENST00000374826 TRAV13-2A0A0B4J235 113 aa2.5□□□□□ -2.01
PMS1-202ENST00000374826 CRYGAP11844 174 aa2.5□□□□□ -2.01
PMS1-202ENST00000374826 COX7BP24311 80 aa2.5□□□□□ -2.01
PMS1-202ENST00000374826 SEC61GP60059 68 aa2.5□□□□□ -2.01
PMS1-202ENST00000374826 KRTAP13-2Q52LG2 175 aa2.5□□□□□ -2.01
PMS1-202ENST00000374826 C3orf22Q8N5N4 141 aa2.5□□□□□ -2.01
PMS1-202ENST00000374826 ST20-AS1Q8NBB2 130 aa2.5□□□□□ -2.01
PMS1-202ENST00000374826 SMIM11BQ8TCY0 68 aa2.5□□□□□ -2.01
PMS1-202ENST00000374826 HIGD1BQ9P298 99 aa2.5□□□□□ -2.01
PMS1-202ENST00000374826 CBY1Q9Y3M2 126 aa2.5□□□□□ -2.01
PMS1-202ENST00000374826 ZNF706Q9Y5V0 76 aaPredicted RBP2.5□□□□□ -2.01
PMS1-202ENST00000374826 H7C2G1 150 aa2.49□□□□□ -2.01
PMS1-202ENST00000374826 HINT1P49773 126 aaPredicted RBP2.49□□□□□ -2.01
PMS1-202ENST00000374826 FXYD2P54710 66 aa2.49□□□□□ -2.01
PMS1-202ENST00000374826 ELOF1P60002 83 aaKnown RBP2.49□□□□□ -2.01
PMS1-202ENST00000374826 FAM229BQ4G0N7 80 aa2.49□□□□□ -2.01
PMS1-202ENST00000374826 PRO1933Q9H354 126 aa2.49□□□□□ -2.01
PMS1-202ENST00000374826 A0A1B0GWB2 263 aa2.48□□□□□ -2.01
PMS1-202ENST00000374826 TSPAN13O95857 204 aa2.48□□□□□ -2.01
PMS1-202ENST00000374826 SMIM6P0DI80 62 aa2.48□□□□□ -2.01
PMS1-202ENST00000374826 MOBPQ13875 183 aa2.48□□□□□ -2.01
PMS1-202ENST00000374826 RAB37Q96AX2 223 aa2.48□□□□□ -2.01
PMS1-202ENST00000374826 UQCR10Q9UDW1 63 aa2.48□□□□□ -2.01
PMS1-202ENST00000374826 A0A0B4J2C4 111 aa2.47□□□□□ -2.01
PMS1-202ENST00000374826 TRBV7-6A0A0J9YX20 115 aa2.47□□□□□ -2.01
PMS1-202ENST00000374826 LOC105371267A0A1B0GV96 52 aa2.47□□□□□ -2.01
PMS1-202ENST00000374826 K7ERJ3 54 aa2.47□□□□□ -2.01
PMS1-202ENST00000374826 HSD52Q0P140 79 aa2.47□□□□□ -2.01
PMS1-202ENST00000374826 TAL2Q16559 108 aa2.47□□□□□ -2.01
PMS1-202ENST00000374826 LINC00483Q53H64 154 aa2.47□□□□□ -2.01
PMS1-202ENST00000374826 C9orf153Q5TBE3 101 aa2.47□□□□□ -2.01
PMS1-202ENST00000374826 LINC00304Q8N9R0 145 aa2.47□□□□□ -2.01
PMS1-202ENST00000374826 DEFB105AQ8NG35 78 aa2.47□□□□□ -2.01
PMS1-202ENST00000374826 NHP2Q9NX24 153 aaKnown RBP2.47□□□□□ -2.01
PMS1-202ENST00000374826 KRTAP10-10P60014 251 aa2.46□□□□□ -2.02
PMS1-202ENST00000374826 PRO1854Q9UHT4 67 aa2.46□□□□□ -2.02
PMS1-202ENST00000374826 HMCN2Q8NDA2 5059 aa2.46□□□□□ -2.02
PMS1-202ENST00000374826 PCP4L1A6NKN8 68 aa2.45□□□□□ -2.02
PMS1-202ENST00000374826 SLC25A20O43772 301 aa2.45□□□□□ -2.02
PMS1-202ENST00000374826 SPRR1BP22528 89 aa2.45□□□□□ -2.02
PMS1-202ENST00000374826 VAMP3Q15836 100 aa2.45□□□□□ -2.02
PMS1-202ENST00000374826 LINC00575Q6W349 94 aa2.45□□□□□ -2.02
PMS1-202ENST00000374826 Q6ZQY7 126 aa2.45□□□□□ -2.02
PMS1-202ENST00000374826 RETNLBQ9BQ08 111 aa2.45□□□□□ -2.02
PMS1-202ENST00000374826 IGLV5-48A0A075B6I7 105 aa2.44□□□□□ -2.02
PMS1-202ENST00000374826 TEX49A0A1B0GTD5 131 aa2.44□□□□□ -2.02
PMS1-202ENST00000374826 hADV29S1A0JD25 119 aa2.44□□□□□ -2.02
PMS1-202ENST00000374826 BVES-AS1Q5T3Y7 98 aa2.44□□□□□ -2.02
PMS1-202ENST00000374826 HRCT1Q6UXD1 115 aa2.44□□□□□ -2.02
PMS1-202ENST00000374826 LAMTOR3Q9UHA4 124 aa2.44□□□□□ -2.02
PMS1-202ENST00000374826 LPAP08519 4548 aa2.43□□□□□ -2.02
PMS1-202ENST00000374826 A0A0G2JQZ4 141 aa2.43□□□□□ -2.02
PMS1-202ENST00000374826 TSTD3H0UI37 97 aa2.43□□□□□ -2.02
PMS1-202ENST00000374826 PSMB2P49721 201 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 271 ms