RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 IGLV1-50A0A075B6I6 118 aa10.75□□□□□ -0.69
PHF1-202ENST00000374516 KRTAP7-1Q8IUC3 87 aa10.75□□□□□ -0.69
PHF1-202ENST00000374516 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.74□□□□□ -0.69
PHF1-202ENST00000374516 SPRR4Q96PI1 79 aa10.74□□□□□ -0.69
PHF1-202ENST00000374516 SPRR1AP35321 89 aa10.74□□□□□ -0.69
PHF1-202ENST00000374516 DSCR10P59022 87 aa10.74□□□□□ -0.69
PHF1-202ENST00000374516 ETDCA0A1B0GVM5 59 aa10.73□□□□□ -0.69
PHF1-202ENST00000374516 PKIGQ9Y2B9 76 aa10.73□□□□□ -0.69
PHF1-202ENST00000374516 NBDYA0A0U1RRE5 68 aa10.71□□□□□ -0.69
PHF1-202ENST00000374516 IGLV5-37A0A075B6J1 123 aa10.7□□□□□ -0.7
PHF1-202ENST00000374516 IGKV2-24A0A0C4DH68 120 aa10.7□□□□□ -0.7
PHF1-202ENST00000374516 hDV103S1A0JD37 113 aa10.7□□□□□ -0.7
PHF1-202ENST00000374516 K7EQZ3 153 aa10.69□□□□□ -0.7
PHF1-202ENST00000374516 ZCCHC13Q8WW36 166 aaKnown RBP10.69□□□□□ -0.7
PHF1-202ENST00000374516 TGP01266 2768 aa10.69□□□□□ -0.7
PHF1-202ENST00000374516 FBN3Q75N90 2809 aa10.68□□□□□ -0.7
PHF1-202ENST00000374516 A0A096LNI7 61 aa10.68□□□□□ -0.7
PHF1-202ENST00000374516 CNBPP62633 177 aaKnown RBP10.67□□□□□ -0.7
PHF1-202ENST00000374516 MRPL55Q7Z7F7 128 aaKnown RBP10.67□□□□□ -0.7
PHF1-202ENST00000374516 VPS13DQ5THJ4 4388 aa10.67□□□□□ -0.7
PHF1-202ENST00000374516 C1orf64Q8NEQ6 169 aa10.66□□□□□ -0.7
PHF1-202ENST00000374516 LRCOL1A6NCL2 159 aa10.65□□□□□ -0.7
PHF1-202ENST00000374516 KMT2AQ03164 3969 aa10.65□□□□□ -0.71
PHF1-202ENST00000374516 UBE2BP63146 152 aa10.64□□□□□ -0.71
PHF1-202ENST00000374516 C16orf90A8MZG2 172 aa10.63□□□□□ -0.71
PHF1-202ENST00000374516 HCG22E2RYF7 251 aa10.63□□□□□ -0.71
PHF1-202ENST00000374516 A0A1W2PNN7 141 aa10.62□□□□□ -0.71
PHF1-202ENST00000374516 CHTF8P0CG12 524 aa10.62□□□□□ -0.71
PHF1-202ENST00000374516 C14orf177Q52M58 125 aa10.62□□□□□ -0.71
PHF1-202ENST00000374516 Q6ZRN7 208 aaPredicted RBP10.62□□□□□ -0.71
PHF1-202ENST00000374516 Q1T7F1 81 aa10.61□□□□□ -0.71
PHF1-202ENST00000374516 LINC00476Q8WZB0 136 aa10.61□□□□□ -0.71
PHF1-202ENST00000374516 A0A0G2JQZ4 141 aa10.59□□□□□ -0.71
PHF1-202ENST00000374516 C1orf195Q5TG92 126 aa10.58□□□□□ -0.72
PHF1-202ENST00000374516 REG3GQ6UW15 175 aa10.58□□□□□ -0.72
PHF1-202ENST00000374516 CYP4F30PQ9H0H9 118 aa10.57□□□□□ -0.72
PHF1-202ENST00000374516 DNAH2Q9P225 4427 aa10.57□□□□□ -0.72
PHF1-202ENST00000374516 DEFB116Q30KQ4 102 aa10.57□□□□□ -0.72
PHF1-202ENST00000374516 IGFL1Q6UW32 110 aa10.56□□□□□ -0.72
PHF1-202ENST00000374516 C9orf163Q8N9P6 203 aa10.56□□□□□ -0.72
PHF1-202ENST00000374516 PRR4Q16378 134 aa10.55□□□□□ -0.72
PHF1-202ENST00000374516 SRRM2Q9UQ35 2752 aaKnown RBP10.53□□□□□ -0.72
PHF1-202ENST00000374516 NDUFB1O75438 58 aa10.53□□□□□ -0.72
PHF1-202ENST00000374516 PHF5AQ7RTV0 110 aaKnown RBP10.52□□□□□ -0.72
PHF1-202ENST00000374516 WFDC13Q8IUB5 93 aa10.52□□□□□ -0.72
PHF1-202ENST00000374516 PANO1I0J062 215 aa10.51□□□□□ -0.73
PHF1-202ENST00000374516 A0A087WSZ3 146 aa10.51□□□□□ -0.73
PHF1-202ENST00000374516 KRTAP11-1Q8IUC1 163 aa10.51□□□□□ -0.73
PHF1-202ENST00000374516 HECTD4Q9Y4D8 3996 aa10.5□□□□□ -0.73
PHF1-202ENST00000374516 TRAV22A0A0B4J277 110 aa10.5□□□□□ -0.73
PHF1-202ENST00000374516 MP68P56378 58 aa10.5□□□□□ -0.73
PHF1-202ENST00000374516 PRLHP81277 87 aa10.5□□□□□ -0.73
PHF1-202ENST00000374516 IGLV8-61A0A075B6I0 122 aa10.49□□□□□ -0.73
PHF1-202ENST00000374516 PSPHP1O15172 72 aa10.49□□□□□ -0.73
PHF1-202ENST00000374516 A0A087WTM6 91 aa10.49□□□□□ -0.73
PHF1-202ENST00000374516 PRR15Q8IV56 129 aa10.49□□□□□ -0.73
PHF1-202ENST00000374516 RPL37AP61513 92 aaKnown RBP10.47□□□□□ -0.73
PHF1-202ENST00000374516 Q6ZR54 194 aa10.47□□□□□ -0.73
PHF1-202ENST00000374516 KRTAP29-1A8MX34 341 aaPredicted RBP10.46□□□□□ -0.73
PHF1-202ENST00000374516 LY6G6CO95867 125 aa10.46□□□□□ -0.73
PHF1-202ENST00000374516 LINC00208Q96KT6 92 aa10.46□□□□□ -0.73
PHF1-202ENST00000374516 V9GYY9 64 aa10.45□□□□□ -0.74
PHF1-202ENST00000374516 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.44□□□□□ -0.74
PHF1-202ENST00000374516 UBE2AP49459 152 aa10.41□□□□□ -0.74
PHF1-202ENST00000374516 CASC2Q6XLA1 102 aa10.4□□□□□ -0.74
PHF1-202ENST00000374516 RTL8CO15255 209 aa10.4□□□□□ -0.74
PHF1-202ENST00000374516 C1orf134Q5TEV5 83 aa10.4□□□□□ -0.74
PHF1-202ENST00000374516 A8MUN3 132 aa10.39□□□□□ -0.75
PHF1-202ENST00000374516 H0Y9P7 68 aa10.39□□□□□ -0.75
PHF1-202ENST00000374516 SPANXA2-OT1Q8N9U9 137 aa10.39□□□□□ -0.75
PHF1-202ENST00000374516 H3BPC8 53 aa10.38□□□□□ -0.75
PHF1-202ENST00000374516 SPACA4Q8TDM5 124 aa10.38□□□□□ -0.75
PHF1-202ENST00000374516 DNAH17Q9UFH2 4485 aa10.37□□□□□ -0.75
PHF1-202ENST00000374516 LINC00472Q9H8W2 130 aa10.36□□□□□ -0.75
PHF1-202ENST00000374516 A8MWP4 228 aa10.35□□□□□ -0.75
PHF1-202ENST00000374516 WWC2-AS2Q96NR7 200 aa10.35□□□□□ -0.75
PHF1-202ENST00000374516 PMAIP1Q13794 54 aa10.33□□□□□ -0.76
PHF1-202ENST00000374516 IGLV5-52A0A0A0MRZ9 124 aa10.33□□□□□ -0.76
PHF1-202ENST00000374516 SPRR1BP22528 89 aa10.33□□□□□ -0.76
PHF1-202ENST00000374516 Q5VV11 94 aa10.33□□□□□ -0.76
PHF1-202ENST00000374516 HYDINQ4G0P3 5121 aa10.32□□□□□ -0.76
PHF1-202ENST00000374516 Q8N9P0 234 aaPredicted RBP10.32□□□□□ -0.76
PHF1-202ENST00000374516 DNAH6Q9C0G6 4158 aa10.31□□□□□ -0.76
PHF1-202ENST00000374516 H0Y9J4 135 aa10.3□□□□□ -0.76
PHF1-202ENST00000374516 SEC61GP60059 68 aa10.3□□□□□ -0.76
PHF1-202ENST00000374516 DNAH8Q96JB1 4490 aa10.29□□□□□ -0.76
PHF1-202ENST00000374516 LIMD2Q9BT23 127 aa10.28□□□□□ -0.76
PHF1-202ENST00000374516 FRAS1Q86XX4 4008 aa10.28□□□□□ -0.76
PHF1-202ENST00000374516 A8MU10 97 aa10.27□□□□□ -0.77
PHF1-202ENST00000374516 KRTAP13-1Q8IUC0 172 aa10.25□□□□□ -0.77
PHF1-202ENST00000374516 MMP24-AS1A0A0U1RRL7 71 aa10.24□□□□□ -0.77
PHF1-202ENST00000374516 CHKB-CPT1BH3BT56 60 aa10.24□□□□□ -0.77
PHF1-202ENST00000374516 DNAH5Q8TE73 4624 aa10.24□□□□□ -0.77
PHF1-202ENST00000374516 DNAH11Q96DT5 4516 aa10.23□□□□□ -0.77
PHF1-202ENST00000374516 KRTAP10-2P60368 255 aa10.23□□□□□ -0.77
PHF1-202ENST00000374516 IGLV7-46A0A075B6I9 117 aa10.22□□□□□ -0.77
PHF1-202ENST00000374516 PLAC8Q9NZF1 115 aa10.22□□□□□ -0.77
PHF1-202ENST00000374516 PSORS1C2Q9UIG4 136 aa10.22□□□□□ -0.77
PHF1-202ENST00000374516 PRR15LQ9BU68 103 aa10.22□□□□□ -0.77
PHF1-202ENST00000374516 ALMS1Q8TCU4 4167 aa10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms