RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 FAM218AQ96MZ4 157 aa11.82□□□□□ -0.52
TMEM54-202ENST00000373463 MUC17Q685J3 4493 aa11.81□□□□□ -0.52
TMEM54-202ENST00000373463 HSD52Q0P140 79 aa11.8□□□□□ -0.52
TMEM54-202ENST00000373463 LIMD2Q9BT23 127 aa11.8□□□□□ -0.52
TMEM54-202ENST00000373463 PRO1854Q9UHT4 67 aa11.8□□□□□ -0.52
TMEM54-202ENST00000373463 TMEM238LA0A1B0GVL6 79 aa11.79□□□□□ -0.52
TMEM54-202ENST00000373463 A6NJY4 79 aa11.79□□□□□ -0.52
TMEM54-202ENST00000373463 MUC2Q02817 5179 aa11.78□□□□□ -0.52
TMEM54-202ENST00000373463 IGLV8-61A0A075B6I0 122 aa11.77□□□□□ -0.53
TMEM54-202ENST00000373463 Q5XG85 94 aa11.77□□□□□ -0.53
TMEM54-202ENST00000373463 UQCR10Q9UDW1 63 aa11.76□□□□□ -0.53
TMEM54-202ENST00000373463 H0YGX0 51 aa11.75□□□□□ -0.53
TMEM54-202ENST00000373463 F8WEM9 126 aa11.74□□□□□ -0.53
TMEM54-202ENST00000373463 K7ERJ3 54 aa11.74□□□□□ -0.53
TMEM54-202ENST00000373463 TRIAP1O43715 76 aa11.73□□□□□ -0.53
TMEM54-202ENST00000373463 PPDPFLQ8WWR9 84 aa11.73□□□□□ -0.53
TMEM54-202ENST00000373463 OCIAD2Q56VL3 154 aa11.72□□□□□ -0.53
TMEM54-202ENST00000373463 IGFL1Q6UW32 110 aa11.72□□□□□ -0.53
TMEM54-202ENST00000373463 C1orf195Q5TG92 126 aa11.71□□□□□ -0.53
TMEM54-202ENST00000373463 Q6JHZ5 121 aa11.69□□□□□ -0.54
TMEM54-202ENST00000373463 XP32Q5T750 250 aa11.68□□□□□ -0.54
TMEM54-202ENST00000373463 CLEC2BQ92478 149 aa11.68□□□□□ -0.54
TMEM54-202ENST00000373463 H3BUT2 72 aa11.67□□□□□ -0.54
TMEM54-202ENST00000373463 ASB16-AS1Q495Z4 193 aa11.67□□□□□ -0.54
TMEM54-202ENST00000373463 SNHG12Q9BXW3 62 aa11.67□□□□□ -0.54
TMEM54-202ENST00000373463 A0A1B0GX51 115 aa11.65□□□□□ -0.54
TMEM54-202ENST00000373463 TRBV7-7A0A0K0K1E9 115 aa11.63□□□□□ -0.55
TMEM54-202ENST00000373463 KRTAP4-1Q9BYQ7 146 aa11.63□□□□□ -0.55
TMEM54-202ENST00000373463 NDUFV3P56181 108 aaKnown RBP11.62□□□□□ -0.55
TMEM54-202ENST00000373463 C9orf92A6NGG3 77 aa11.61□□□□□ -0.55
TMEM54-202ENST00000373463 SNCGO76070 127 aa11.61□□□□□ -0.55
TMEM54-202ENST00000373463 TCL1BO95988 128 aa11.59□□□□□ -0.55
TMEM54-202ENST00000373463 PSMB2P49721 201 aa11.58□□□□□ -0.56
TMEM54-202ENST00000373463 SMIM6P0DI80 62 aa11.57□□□□□ -0.56
TMEM54-202ENST00000373463 SEC61BP60468 96 aaKnown RBP11.56□□□□□ -0.56
TMEM54-202ENST00000373463 FABP2P12104 132 aa11.55□□□□□ -0.56
TMEM54-202ENST00000373463 H3BMG7 143 aa11.53□□□□□ -0.56
TMEM54-202ENST00000373463 Q6Q795 121 aa11.53□□□□□ -0.56
TMEM54-202ENST00000373463 FAT4Q6V0I7 4981 aa11.51□□□□□ -0.57
TMEM54-202ENST00000373463 LOC105371267A0A1B0GV96 52 aa11.5□□□□□ -0.57
TMEM54-202ENST00000373463 COX6CP09669 75 aa11.5□□□□□ -0.57
TMEM54-202ENST00000373463 A0A0U1RQV1 116 aa11.49□□□□□ -0.57
TMEM54-202ENST00000373463 GHRHP01286 108 aa11.49□□□□□ -0.57
TMEM54-202ENST00000373463 ORMDL1Q9P0S3 153 aa11.49□□□□□ -0.57
TMEM54-202ENST00000373463 DNAL4O96015 105 aa11.48□□□□□ -0.57
TMEM54-202ENST00000373463 TEN1Q86WV5 123 aa11.48□□□□□ -0.57
TMEM54-202ENST00000373463 LCE2AQ5TA79 106 aaPredicted RBP11.47□□□□□ -0.57
TMEM54-202ENST00000373463 A0A1W2PNM2 257 aa11.46□□□□□ -0.57
TMEM54-202ENST00000373463 LST1O00453 97 aa11.46□□□□□ -0.57
TMEM54-202ENST00000373463 TRACP01848 142 aa11.45□□□□□ -0.58
TMEM54-202ENST00000373463 PCOTHQ58A44 107 aa11.44□□□□□ -0.58
TMEM54-202ENST00000373463 A0A1B0GV72 72 aa11.43□□□□□ -0.58
TMEM54-202ENST00000373463 M0R143 59 aa11.43□□□□□ -0.58
TMEM54-202ENST00000373463 A0A087WSZ3 146 aa11.42□□□□□ -0.58
TMEM54-202ENST00000373463 TMEM256-PLSCR3K7ERE1 68 aa11.42□□□□□ -0.58
TMEM54-202ENST00000373463 SCGB1C2P0DMR2 95 aa11.42□□□□□ -0.58
TMEM54-202ENST00000373463 NAA38Q9BRA0 125 aaKnown RBP11.42□□□□□ -0.58
TMEM54-202ENST00000373463 Q96NJ1 140 aa11.41□□□□□ -0.58
TMEM54-202ENST00000373463 H3BQ85 93 aa11.4□□□□□ -0.58
TMEM54-202ENST00000373463 RPL37P61927 97 aaKnown RBP11.39□□□□□ -0.59
TMEM54-202ENST00000373463 SS18L2Q9UHA2 77 aa11.39□□□□□ -0.59
TMEM54-202ENST00000373463 UBE2V1Q13404 147 aa11.38□□□□□ -0.59
TMEM54-202ENST00000373463 ANKRD29Q8N6D5 301 aa11.37□□□□□ -0.59
TMEM54-202ENST00000373463 TSTD3H0UI37 97 aa11.35□□□□□ -0.59
TMEM54-202ENST00000373463 TRBV7-4A0A0J9YYF1 115 aa11.34□□□□□ -0.59
TMEM54-202ENST00000373463 OBSCN-AS1Q96MR7 158 aa11.33□□□□□ -0.6
TMEM54-202ENST00000373463 BAALC-AS2P0C853 105 aa11.31□□□□□ -0.6
TMEM54-202ENST00000373463 KRTAP19-2Q3LHN2 52 aa11.31□□□□□ -0.6
TMEM54-202ENST00000373463 CCKP06307 115 aa11.29□□□□□ -0.6
TMEM54-202ENST00000373463 LCE2CQ5TA81 110 aa11.28□□□□□ -0.6
TMEM54-202ENST00000373463 BATFQ16520 125 aa11.27□□□□□ -0.61
TMEM54-202ENST00000373463 ATXN8Q156A1 80 aa11.26□□□□□ -0.61
TMEM54-202ENST00000373463 RBM3P98179 157 aaKnown RBP11.25□□□□□ -0.61
TMEM54-202ENST00000373463 Q75L30 129 aa11.23□□□□□ -0.61
TMEM54-202ENST00000373463 LINC00472Q9H8W2 130 aa11.23□□□□□ -0.61
TMEM54-202ENST00000373463 SIGMAR1Q99720 223 aa11.2□□□□□ -0.62
TMEM54-202ENST00000373463 IGKV4-1P06312 121 aa11.19□□□□□ -0.62
TMEM54-202ENST00000373463 DSCR10P59022 87 aa11.19□□□□□ -0.62
TMEM54-202ENST00000373463 DEFB116Q30KQ4 102 aa11.19□□□□□ -0.62
TMEM54-202ENST00000373463 DSCR8Q96T75 97 aa11.19□□□□□ -0.62
TMEM54-202ENST00000373463 VPS25Q9BRG1 176 aa11.19□□□□□ -0.62
TMEM54-202ENST00000373463 TAX1BP3O14907 124 aa11.18□□□□□ -0.62
TMEM54-202ENST00000373463 C20orf166-AS1Q96NR2 134 aa11.18□□□□□ -0.62
TMEM54-202ENST00000373463 A8MUU9 505 aa11.16□□□□□ -0.62
TMEM54-202ENST00000373463 C9orf118A6NHY6 69 aa11.15□□□□□ -0.62
TMEM54-202ENST00000373463 C9JAW5 83 aa11.15□□□□□ -0.62
TMEM54-202ENST00000373463 TRBV20-1A0A075B6N2 111 aa11.14□□□□□ -0.63
TMEM54-202ENST00000373463 LYRM7Q5U5X0 104 aa11.14□□□□□ -0.63
TMEM54-202ENST00000373463 NOTCH2NLQ7Z3S9 236 aa11.14□□□□□ -0.63
TMEM54-202ENST00000373463 KRTAP16-1A8MUX0 517 aa11.13□□□□□ -0.63
TMEM54-202ENST00000373463 Q6ZQT0 140 aa11.13□□□□□ -0.63
TMEM54-202ENST00000373463 LOC110117498A0A087WWA1 95 aa11.1□□□□□ -0.63
TMEM54-202ENST00000373463 A0A1W2PPM0 123 aa11.1□□□□□ -0.63
TMEM54-202ENST00000373463 JMJD7-PLA2G4BH0Y9G9 81 aa11.1□□□□□ -0.63
TMEM54-202ENST00000373463 ATP11AUNQ6ZP68 121 aa11.1□□□□□ -0.63
TMEM54-202ENST00000373463 LINC00313P59037 77 aa11.08□□□□□ -0.64
TMEM54-202ENST00000373463 MT1HP80294 61 aa11.08□□□□□ -0.64
TMEM54-202ENST00000373463 C14orf132Q9NPU4 83 aa11.08□□□□□ -0.64
TMEM54-202ENST00000373463 MTURNQ8N3F0 131 aa11.05□□□□□ -0.64
TMEM54-202ENST00000373463 IGHV6-1A0A0B4J1U7 121 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 167.5 ms