RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 CASC10Q5T4H9 136 aa3.51□□□□□ -1.85
ATG4A-204ENST00000372246 C15orf56Q8N910 161 aa3.51□□□□□ -1.85
ATG4A-204ENST00000372246 DNAH10Q8IVF4 4471 aa3.51□□□□□ -1.85
ATG4A-204ENST00000372246 RPL37AP61513 92 aaKnown RBP3.51□□□□□ -1.85
ATG4A-204ENST00000372246 PHF5AQ7RTV0 110 aaKnown RBP3.51□□□□□ -1.85
ATG4A-204ENST00000372246 Q9BRP9 147 aa3.51□□□□□ -1.85
ATG4A-204ENST00000372246 PRR34Q9NV39 138 aa3.51□□□□□ -1.85
ATG4A-204ENST00000372246 LYRM9A8MSI8 78 aa3.5□□□□□ -1.85
ATG4A-204ENST00000372246 Q1T7F1 81 aa3.5□□□□□ -1.85
ATG4A-204ENST00000372246 KPRPQ5T749 579 aaPredicted RBP3.5□□□□□ -1.85
ATG4A-204ENST00000372246 WFDC13Q8IUB5 93 aa3.5□□□□□ -1.85
ATG4A-204ENST00000372246 Q8NAQ8 132 aa3.5□□□□□ -1.85
ATG4A-204ENST00000372246 C7orf33Q8WU49 177 aa3.5□□□□□ -1.85
ATG4A-204ENST00000372246 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.5□□□□□ -1.85
ATG4A-204ENST00000372246 IGKV2D-24A0A075B6R9 120 aa3.5□□□□□ -1.85
ATG4A-204ENST00000372246 A8MUN3 132 aa3.5□□□□□ -1.85
ATG4A-204ENST00000372246 DSCR10P59022 87 aa3.49□□□□□ -1.85
ATG4A-204ENST00000372246 LELP1Q5T871 98 aa3.49□□□□□ -1.85
ATG4A-204ENST00000372246 NSD1Q96L73 2696 aaPredicted RBP3.49□□□□□ -1.85
ATG4A-204ENST00000372246 TENM2Q9NT68 2774 aa3.49□□□□□ -1.85
ATG4A-204ENST00000372246 hDV103S1A0JD37 113 aa3.49□□□□□ -1.85
ATG4A-204ENST00000372246 PDE6GP18545 87 aa3.49□□□□□ -1.85
ATG4A-204ENST00000372246 KRTAP26-1Q6PEX3 210 aa3.49□□□□□ -1.85
ATG4A-204ENST00000372246 C1orf137Q5JT78 98 aa3.48□□□□□ -1.85
ATG4A-204ENST00000372246 KRTAP7-1Q8IUC3 87 aa3.48□□□□□ -1.85
ATG4A-204ENST00000372246 TRAV22A0A0B4J277 110 aa3.48□□□□□ -1.85
ATG4A-204ENST00000372246 WWC2-AS2Q96NR7 200 aa3.48□□□□□ -1.85
ATG4A-204ENST00000372246 NBEAL1Q6ZS30 2694 aa3.48□□□□□ -1.85
ATG4A-204ENST00000372246 STAB1Q9NY15 2570 aa3.48□□□□□ -1.85
ATG4A-204ENST00000372246 A0A096LNI7 61 aa3.47□□□□□ -1.85
ATG4A-204ENST00000372246 CMC4P56277 68 aaPredicted RBP3.47□□□□□ -1.85
ATG4A-204ENST00000372246 UBE2BP63146 152 aa3.47□□□□□ -1.85
ATG4A-204ENST00000372246 NKAPP1Q8N9T2 125 aa3.47□□□□□ -1.85
ATG4A-204ENST00000372246 GVQW2A0A096LPI5 108 aaPredicted RBP3.47□□□□□ -1.85
ATG4A-204ENST00000372246 LCA10Q71F78 164 aa3.47□□□□□ -1.85
ATG4A-204ENST00000372246 SPART-AS1P0CW21 52 aa3.46□□□□□ -1.85
ATG4A-204ENST00000372246 EGFEM1PQ0D2K5 195 aa3.46□□□□□ -1.86
ATG4A-204ENST00000372246 KRTAP21-3Q3LHN1 58 aa3.46□□□□□ -1.86
ATG4A-204ENST00000372246 A6NN06 94 aa3.45□□□□□ -1.86
ATG4A-204ENST00000372246 PRLHP81277 87 aa3.45□□□□□ -1.86
ATG4A-204ENST00000372246 IGLV5-48A0A075B6I7 105 aa3.45□□□□□ -1.86
ATG4A-204ENST00000372246 SYCNQ0VAF6 134 aa3.45□□□□□ -1.86
ATG4A-204ENST00000372246 LINC00208Q96KT6 92 aa3.45□□□□□ -1.86
ATG4A-204ENST00000372246 PSCAO43653 123 aa3.44□□□□□ -1.86
ATG4A-204ENST00000372246 Q6ZRX8 168 aa3.44□□□□□ -1.86
ATG4A-204ENST00000372246 C7orf65Q6ZTY9 151 aa3.44□□□□□ -1.86
ATG4A-204ENST00000372246 A0A087WSZ3 146 aa3.44□□□□□ -1.86
ATG4A-204ENST00000372246 ETDCA0A1B0GVM5 59 aa3.44□□□□□ -1.86
ATG4A-204ENST00000372246 ZCCHC13Q8WW36 166 aaKnown RBP3.44□□□□□ -1.86
ATG4A-204ENST00000372246 LINC00476Q8WZB0 136 aa3.44□□□□□ -1.86
ATG4A-204ENST00000372246 KCNQ1DNQ9H478 68 aa3.44□□□□□ -1.86
ATG4A-204ENST00000372246 IGKV2-24A0A0C4DH68 120 aa3.43□□□□□ -1.86
ATG4A-204ENST00000372246 Q8NBF4 154 aa3.43□□□□□ -1.86
ATG4A-204ENST00000372246 SPTSSBQ8NFR3 76 aa3.43□□□□□ -1.86
ATG4A-204ENST00000372246 INAFM1C9JVW0 142 aa3.42□□□□□ -1.86
ATG4A-204ENST00000372246 HCG22E2RYF7 251 aa3.42□□□□□ -1.86
ATG4A-204ENST00000372246 KRTAP4-16G5E9R7 235 aaPredicted RBP3.42□□□□□ -1.86
ATG4A-204ENST00000372246 IGFL1Q6UW32 110 aa3.42□□□□□ -1.86
ATG4A-204ENST00000372246 ATP11AUNQ6ZP68 121 aa3.42□□□□□ -1.86
ATG4A-204ENST00000372246 IGLV1-50A0A075B6I6 118 aa3.42□□□□□ -1.86
ATG4A-204ENST00000372246 Q5VV11 94 aa3.42□□□□□ -1.86
ATG4A-204ENST00000372246 KRTAP11-1Q8IUC1 163 aa3.42□□□□□ -1.86
ATG4A-204ENST00000372246 Q8N1X5 172 aa3.41□□□□□ -1.86
ATG4A-204ENST00000372246 LCE6AA0A183 80 aa3.41□□□□□ -1.86
ATG4A-204ENST00000372246 CHKB-CPT1BH3BT56 60 aa3.41□□□□□ -1.86
ATG4A-204ENST00000372246 PCOTHQ58A44 107 aa3.41□□□□□ -1.86
ATG4A-204ENST00000372246 PRR15LQ9BU68 103 aa3.41□□□□□ -1.86
ATG4A-204ENST00000372246 DNAH9Q9NYC9 4486 aa3.41□□□□□ -1.86
ATG4A-204ENST00000372246 C16orf90A8MZG2 172 aa3.4□□□□□ -1.87
ATG4A-204ENST00000372246 UBE2AP49459 152 aa3.4□□□□□ -1.87
ATG4A-204ENST00000372246 KRTAP10-11P60412 298 aa3.4□□□□□ -1.87
ATG4A-204ENST00000372246 H3BQ85 93 aa3.39□□□□□ -1.87
ATG4A-204ENST00000372246 CHTF8P0CG12 524 aa3.39□□□□□ -1.87
ATG4A-204ENST00000372246 DNAH7Q8WXX0 4024 aa3.39□□□□□ -1.87
ATG4A-204ENST00000372246 DEFB131BA0A096LNP1 70 aa3.39□□□□□ -1.87
ATG4A-204ENST00000372246 H0Y9P7 68 aa3.39□□□□□ -1.87
ATG4A-204ENST00000372246 LINC00313P59037 77 aa3.39□□□□□ -1.87
ATG4A-204ENST00000372246 SPRR4Q96PI1 79 aa3.39□□□□□ -1.87
ATG4A-204ENST00000372246 B9D2Q9BPU9 175 aa3.39□□□□□ -1.87
ATG4A-204ENST00000372246 DNAH1Q9P2D7 4330 aa3.39□□□□□ -1.87
ATG4A-204ENST00000372246 DHRS4-AS1Q9P1J3 65 aa3.38□□□□□ -1.87
ATG4A-204ENST00000372246 FRAS1Q86XX4 4008 aa3.38□□□□□ -1.87
ATG4A-204ENST00000372246 CNBPP62633 177 aaKnown RBP3.38□□□□□ -1.87
ATG4A-204ENST00000372246 Q8N9P0 234 aaPredicted RBP3.38□□□□□ -1.87
ATG4A-204ENST00000372246 STAB2Q8WWQ8 2551 aa3.37□□□□□ -1.87
ATG4A-204ENST00000372246 SPRR1AP35321 89 aa3.37□□□□□ -1.87
ATG4A-204ENST00000372246 SPAG11AQ6PDA7 123 aa3.37□□□□□ -1.87
ATG4A-204ENST00000372246 REG3GQ6UW15 175 aa3.37□□□□□ -1.87
ATG4A-204ENST00000372246 CASC2Q6XLA1 102 aa3.37□□□□□ -1.87
ATG4A-204ENST00000372246 H0Y9J4 135 aa3.36□□□□□ -1.87
ATG4A-204ENST00000372246 KRTAP29-1A8MX34 341 aaPredicted RBP3.36□□□□□ -1.87
ATG4A-204ENST00000372246 MP68P56378 58 aa3.36□□□□□ -1.87
ATG4A-204ENST00000372246 LINC01554Q52M75 96 aa3.36□□□□□ -1.87
ATG4A-204ENST00000372246 LINC01556Q5JQF7 62 aa3.36□□□□□ -1.87
ATG4A-204ENST00000372246 CYP4F30PQ9H0H9 118 aa3.36□□□□□ -1.87
ATG4A-204ENST00000372246 A0A0A0MQY5 61 aa3.35□□□□□ -1.87
ATG4A-204ENST00000372246 A6NED7 52 aa3.35□□□□□ -1.87
ATG4A-204ENST00000372246 CMYA5Q8N3K9 4069 aa3.35□□□□□ -1.87
ATG4A-204ENST00000372246 K7EIL1 84 aa3.35□□□□□ -1.87
ATG4A-204ENST00000372246 KRTAP1-5Q9BYS1 174 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms